Coccomyxa subellipsoidea: COCSUDRAFT_19857
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Entry
COCSUDRAFT_19857 CDS
T02914
Name
(RefSeq) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00220
Arginine biosynthesis
csl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
COCSUDRAFT_19857
Enzymes [BR:
csl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
COCSUDRAFT_19857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp_5
RnfC_N
Biotin_lipoyl_2
Motif
Other DBs
NCBI-GeneID:
17037057
NCBI-ProteinID:
XP_005643671
JGI:
19857
UniProt:
I0YL58
LinkDB
All DBs
AA seq
1262 aa
AA seq
DB search
MSISHAPVGFFSADPTLHVTLAGYHSLIQHNRRAPHLLVAPCAGAAPKGKVLIANRGEIA
RRVQRSCRQLGLIPVAVYTEPDALSLHVLEAEEKVCLGKSTREYTNAAKLLEAALSTGCK
AVHPGYGFLSENAEFVESCESAGVAFLGPTAATMRMFSRKHTAREFAQSANVPVLPGATI
VTSEEEAVAEAAATGYPVLLKATGGGGGIGIYSCPDEAAVRANFEAAGRQGKASFGDAGV
FVEKHVQRARHIEVQIFGDGKGNIVTLPERECSIQRRHQKVVEESPSPYVEEELRAELKA
AARRLGEAAKYRSAGTIEYLVDQDTSKFYFLEVNTRLQVEHGITEMVSGLDLVDWQMQLQ
VPGLPPPDMASAAAIEPKGWAFEVRINAEDPFRNFTPSSGILGQVVWPPGVRIDTWVETG
TEVTPFYDSLLGKLMVHGKDRPDAVAKMAEALSGTVLGGIPSNLEYLSTIIASEGFHAGA
TTTRFLESLPFKPKAIEVVSPGMNTTVQDYPGRTKLWHVGVPPSGPMDALAFRLANALVG
NASDAAGLEITLSGKLHRPSLRFHMDVIIALTGAEFHAEIDGVAVPFWTSVLVKAGSVLT
IGTLAAKRGARCYIAVAGGINTPVYLGSRATFPGGKLGGVQGRPLKAGDLLPLGPASEGV
KAGNACPKAWVPAYPVEGAAWEIGVLPGPNAAPDYFTEEDIKTLYSAPYTVHYNSNRLGI
RLTGPRPQFARTDGGEGGSHPSNVHDHVYALGTINFTGDMPVALMFDGPSLGGFVCPATI
TSTELWKMGQVSAKDVVFFKPLTLETAYTECLVLDKKEDLLRAAASSSGADVAAELAAYS
PAVPAMPPTEAVLRTLPAHGDFPGAQFRLAGDRYVFVEYGPMELDLNLRVRVHELERYLA
DKVALPACMQAVPGIVETSPGVRSCMIEYDQRVLPLGELLSLLEATERALPSAQDQVLPT
RIIHLPLAFNDKWTHDAIAKYMKSVRKDAPYVPSNVDFVAANNGLEGGADAVRAVVEKAA
YMVLGLGDVYLGAPCAVPVDPRHRLVVPKYNPARTFSPEGAVGLGGAYMCIYPMESPGGY
QLIGRTLPIWNTFGRVGPFTPAVPWLLRNFDQIKYEIVSEEELQTQRKQFANGQLELKIE
EQTFSMKEYNAFVASVAGEVEALRKVQAVAIAEQMALDEASLQRLEAEKAKNKVSFSTLL
HLSQMDTSGLEVTSAFTANVWEVKCKVGDVVAKGQTLVVLEAMKMEYPITAPSSGQVITP
RL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctcacacgctccagtgggcttcttttctgcagaccctactttgcatgtgacc
ttggcaggctatcactccctcatacagcacaataggagagcccctcacttgctcgttgcc
ccatgcgcaggggccgcgccgaagggcaaggtgctgatcgcaaaccggggggagattgca
cggcgagtgcagcgctcctgccgccagctgggcctcattccagtggcagtgtacacagag
ccggatgccctctctctgcatgtgttggaggcggaagagaaggtgtgcctgggcaaatcc
acgcgcgagtacaccaatgccgccaagctgctggaggccgccctctccaccgggtgcaag
gcggtgcacccggggtacggcttcctgagcgagaatgcagagtttgtggagtcttgtgag
agcgccggagtggccttcctgggccccacagccgccaccatgcgcatgttcagccgcaag
cacaccgcgcgcgaattcgcccagagtgccaacgtccccgtcctgccaggtgccacaatt
gtgaccagtgaggaggaggcagtggcagaggcggctgccacaggctatccggtgctgctc
aaagccacgggcggcggtggcggcatcggcatttacagctgccccgacgaggccgccgtg
cgcgcaaacttcgaggcggctggcaggcagggcaaggcgagctttggggacgcgggggtg
tttgtggaaaagcacgtgcagcgcgcgcggcacatcgaggtgcagatcttcggcgacgga
aaagggaacatcgtgacgctgcccgagcgcgagtgctccatccagcgccgccaccagaag
gtcgtcgaggagtcgccctccccctacgtcgaggaggagctgcgggcggagctgaaggca
gctgcccggcggctgggagaggcggccaagtaccgcagcgccgggacaattgaatacctt
gtggaccaggacacctctaagttctacttcctggaagtcaacacgcgcctgcaggtggag
cacggcatcacagagatggtgtctggtctggatctggtggactggcagatgcagctgcag
gtgcccggccttcccccgccagacatggcatcggcggccgccatagagcccaagggatgg
gcctttgaagtgcgcatcaacgccgaagacccttttcgcaacttcaccccctcctctggc
atccttggccaggtcgtctggccgccaggtgtgcgcatagacacgtgggtggagacaggg
acggaggtgacgcccttctacgactcgctgctgggaaagctcatggtgcacggcaaagac
cggccggacgccgtcgcgaaaatggccgaggcgctgtccggcacggtgctcggcggcatt
ccctccaacctggaatacctctccaccatcatcgcctctgagggcttccacgccggtgcg
acaacgactcgattcctggagtcgttgcccttcaagccaaaggccattgaggtggtttct
ccaggcatgaacaccactgtgcaggactacccagggcgcaccaagctgtggcatgtgggc
gtgcccccttctggccctatggatgcactggctttccgcctggccaatgctctcgtgggc
aatgcatcggacgctgcaggcctggagatcaccctttcaggcaagctgcacaggccttcc
ctgcgattccacatggatgtgatcatcgctctgacaggagcggagttccacgcagaaatt
gatggcgtggcagtgcctttctggacttctgtcctggtcaaggccggctcagtgctcacc
atcggcacattggcggccaagcgcggtgccaggtgctatatagcggtggcagggggcatc
aacacgccggtatacctgggctctcgcgcaactttccctggcggcaaactgggcggagtg
cagggccgcccactcaaggcaggggaccttctcccattggggccagccagcgaaggagtg
aaggccggcaacgcctgccccaaagcctgggtgcccgcatacccggtagagggcgccgcc
tgggagattggcgtgctgccggggcccaatgcagcccccgactacttcacagaagaggac
atcaagactctgtactccgcaccgtacactgtgcactacaactcgaaccggctgggcatt
cggctgactggaccgcggccgcagtttgcgcgcacagacggcggcgagggcggctctcac
ccctccaacgtgcacgaccacgtctacgcgctcggcaccatcaactttaccggggacatg
ccggtggcgctgatgtttgacggccccagcctgggcggctttgtgtgcccggccaccatc
accagcacagagctgtggaagatgggccaggtgtcagccaaggatgttgtcttcttcaag
cccctcactctggagacggcgtacacggagtgcctggtgctggacaagaaggaggatctg
ctgagggctgcagccagcagcagcggcgctgacgtggccgctgagctggcggcctacagc
ccggcagtgccggccatgccgccgactgaggccgtgcttcgcacgctgcccgcacatggc
gacttccctggggcgcagttccggctcgcgggcgacagatacgtgtttgtggagtatggg
ccaatggaactcgacctcaacctgcgagtcagggtgcacgagctagaaagatacctggcg
gacaaggtggctctgcctgcatgcatgcaggctgtaccagggattgtggaaacaagtccg
ggcgtgcgatcctgcatgatagagtatgatcagcgagtgctgcccctgggcgagctgctg
tccctgctcgaagccaccgaaagagcgctgccctcggcccaggatcaggtgctgccaacg
aggataattcatctgccgctggccttcaacgacaagtggacgcacgacgcaattgccaag
tacatgaaatctgtccgcaaggacgcgccctatgtgccctccaacgtggactttgtcgcc
gccaacaacgggctggagggcggcgcggatgcggtaagggcggtggttgagaaggcggcg
tatatggtgctgggactgggagatgtttacctgggagccccctgcgcagtgccagtcgat
cccaggcatcggctggtggtgcccaagtacaatccggcgcgcacattctcccccgagggc
gccgtgggactggggggcgcgtatatgtgcatttaccccatggagtcccccggcggctac
cagctgatcggccgcactctgcccatctggaacacattcggccgcgtcgggcccttcacg
cccgcggtaccctggctcctgcgcaactttgaccagatcaagtatgagattgtgtcggag
gaggagcttcagacgcagcgcaagcagtttgccaacgggcaactggaactcaagatcgag
gagcagaccttcagcatgaaggagtacaacgcctttgtggcatctgtggctggagaagtg
gaggccctgcgcaaggttcaggctgtggccatagcagagcagatggccctggacgaggcc
agcctgcagcgactggaggccgagaaggccaagaacaaggtatcgtttagcactctgcta
catctttcacagatggacaccagcggcctggaggtcacgtccgccttcacagcaaatgtc
tgggaggtcaagtgcaaggtgggagatgtggtggcaaaggggcagactcttgtggtcctg
gaggccatgaagatggagtaccccattaccgctccatcatctggccaggtgatcacacct
cgcctctga
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