Coccomyxa subellipsoidea: COCSUDRAFT_20201
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Entry
COCSUDRAFT_20201 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00052
Galactose metabolism
csl00511
Other glycan degradation
csl00600
Sphingolipid metabolism
csl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
COCSUDRAFT_20201
09103 Lipid metabolism
00600 Sphingolipid metabolism
COCSUDRAFT_20201
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
COCSUDRAFT_20201
Enzymes [BR:
csl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
COCSUDRAFT_20201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
BetaGal_gal-bd
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
17036948
NCBI-ProteinID:
XP_005643542
JGI:
20201
UniProt:
I0YKS9
LinkDB
All DBs
AA seq
1095 aa
AA seq
DB search
MAIKSLPRDWENPSVFSRNKCRSHVPLRAHPTPESALLYFLKDPKAADTANLLSLNSSEW
SFHLYDRPEDVPDAFSTPEFDDGLWGKIEVPANWECQGHGTPIYTNFQYPWPITAPFVPA
ENPTGCYRLWFDVPSGWKDRRVFLHFEAVNNACYVWVNGQQLGYSQDSCLPAEFEVTTVL
QPGRNLLSVQVLRFSDGSYLEDMDHWWLSGIYRDVFLLSKPVTHITDFVVNEDQPSGFAE
AVPAVEIEITDQDHWISVDNTIRATHAEAGVGGLAIVGTSFPPFPFDKQLARSVDIDMAT
AGRLPALWSAEEPNLYILVLSLVTKQGEHLDSESTQVGFREVVIEGRQLLVNKRPILVKG
VNRHEHDERRGKAVTEEGMLADIYLLKQLNFNSVRCSHYPNAPRWYELCNQYGLYLVDEA
NVETHGFDPALNNNRVVPANNPLWLHAIVDRGMRMLERDKNHPSIIIWSLGNEAGYGPAH
LAMAGYIRARDSSRPVHYEGGGSRTAATDILCPMYARINQIEAWANEKAETRPLIQCEYA
HAMGNSNGNYKEYWESFEKHPYLQGGFIWDWVDQGLLHKVKDVEGNDVEAWGYGGDFGDP
VHDAQFCINGLIWPNRVPHPGAFECKALKESPNGGLGGLIVRAKNKNTFSSSANLLLSWR
VLLDGVPLLVGDPAQRGLGGWYPGGSVAIAPQVFLEMRAQLSTAMPWAPMGHVVAEQQLL
VPSDWIRDDDDAMPEHAPPPLGKPLQFTQEERGGRKVHNVTGANDLHVEVNTQTGSLDRW
EVGGHSLLAQGVTPCLFRAPLDNDLGGSGKTSFAARWKEAGLDCLEVVADTVKSSVQQIS
DSAVKVPDAPSGAPQEHPLPDAPTPSVEAEVAVAVQYTVHGDGSLRVDWHIDASRALPAS
PPPPLFSSLPRIGMHLGVPAQFSRVHWYGRGPHESYPDRKYGAFLRQYSLDHVQEMHVPY
IFPSENGGRADTRWVSLSDEDGVGLAAVTLSDPFQMNASRFSIATLMAAKHDYELSADPF
THLHLDHRHMGVGGDDSWSPSLHKEYAVEPGEYKFSVLLAPVLPNKEVTAPETAASLWRQ
QVIDHFLEIRCRTTV
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaaaagtcttcctcgagactgggaaaatccgagcgtattcagtcgcaacaag
tgtcgctcccacgtacctttgcgagcccaccctactccagaatcggcgttgctatacttt
ctgaaggatccgaaagcagcagacactgccaatttgctcagtcttaacagttcagaatgg
agctttcatctgtacgatcgccctgaagatgttccagacgctttcagcactcctgaattt
gatgatgggctgtggggcaagattgaagtacctgccaactgggaatgccaggggcatgga
acacccatctacacgaatttccagtacccatggcccatcacggctcctttcgtgcctgca
gagaaccctactggctgttacaggctctggttcgatgtgccatcggggtggaaggacagg
agggtcttcctgcactttgaagccgtcaacaacgcctgctatgtctgggtgaatgggcag
cagctgggctacagccaggacagctgcttgccagcggaatttgaagtcaccactgtcctg
cagcccggccgaaatctcctcagtgtgcaggtgttgcgtttcagcgatgggagttacttg
gaggacatggatcactggtggctctctggcatctacagggatgtcttcctgctcagcaag
ccagtcacccatatcacagactttgttgtgaacgaggaccagcccagtggctttgctgag
gcagttccggcagtggagatcgagatcacagaccaggaccactggatctcagtggacaac
accatcagggcaacccatgcagaggctggcgttgggggcctggctattgtggggacctct
ttcccaccctttccctttgacaagcagctggcgcgctccgtggacattgacatggccaca
gctggcaggctgccggcgctatggagtgcagaagagcccaatctgtacatcttggtgctg
tcgcttgtaacaaagcagggggagcacttggacagcgaatccacacaggtgggcttcagg
gaggtggtgatagagggcaggcagctgctggtgaacaagcgccccattctggtgaagggc
gtgaacaggcacgagcatgatgagcggcgcggcaaggctgtaactgaggagggcatgctg
gctgacatctacctcctgaaacagctcaacttcaactctgtccgctgctcgcactaccca
aatgcgccgcgctggtacgagctgtgcaaccagtatgggctgtaccttgtggacgaggcc
aatgtcgaaacccacgggtttgatccggcactcaacaacaacagagtggttccggcaaac
aacccgctctggctgcatgccatcgtggaccggggcatgcgcatgctggagcgcgacaag
aaccacccctccatcattatctggtctctgggcaatgaggctggctacgggccagcgcac
ctggcaatggctggatacatccgcgcgcgcgactcatctcgccctgtgcattatgaggga
ggaggatcgcgcacagcagctactgacatcttgtgccccatgtatgcccgcatcaatcag
attgaggcctgggccaatgagaaagcagagacacggccgcttatacagtgcgagtatgcc
catgccatgggcaattccaacggcaactacaaggagtactgggagtccttcgagaaacac
ccatacctgcagggggggttcatctgggattgggtagaccaggggctgctgcacaaagtg
aaagacgtggagggcaatgatgtggaggcatggggctatggtggtgactttggtgatccc
gtccacgatgcacaattctgcatcaacggcctcatttggcccaaccgggttccccatcct
ggtgccttcgagtgtaaggccctgaaggagagcccgaacggcggcctgggcgggctgata
gtgcgcgccaaaaacaagaacaccttcagcagttcggccaacctgctgctgagctggcgt
gtgctgctggatggcgtcccgctgctggtgggcgaccctgcccagcgcggactgggtggc
tggtaccccggcggcagcgtcgccattgcaccccaggtgtttctggagatgcgcgcacag
ctcagcacggccatgccatgggctcccatggggcacgtggttgctgagcagcagctgctg
gtgccatccgactggatcagggacgacgatgacgccatgcccgagcatgcccctccaccg
ttggggaagccactgcagttcacccaggaggagcgtggcggcaggaaagtccataatgtc
accggcgccaatgacctgcacgtggaggtgaacacgcagacaggctcgctggaccggtgg
gaggttgggggccactccttgctggcccagggggtgacaccgtgcttgttcagggctcct
ctagacaacgacctgggtggcagtggcaagaccagctttgctgccaggtggaaggaggcg
ggcttggactgtctggaggtggtggccgacacagtgaaatcctctgtgcagcagatatca
gattcagcagtcaaagtgccagatgcgcccagcggcgcacctcaggagcacccgttgccg
gatgcacccactccatctgtggaagccgaggtggctgtggcggtgcaatacacagtgcac
ggcgatggcagcttgcgcgtggactggcacatcgatgcaagccgcgccctgccagccagc
cctcccccgcctcttttctcgtctctgccgcggattggaatgcatctgggcgtgcctgct
cagtttagcagggtgcactggtatggacgaggtccccatgagagctacccagaccgcaag
tatggggctttcctgcgccagtacagcctggaccatgtgcaggagatgcacgtgccatac
atcttcccaagtgagaatggtggaagggcggacacacggtgggtgagtctgagcgatgag
gatggggtcgggctggcagctgtcactctgagcgatccctttcagatgaatgcttcgagg
ttcagcattgccaccctgatggcagcaaagcatgactatgagctcagtgccgatcccttc
acccacttgcacctggaccaccgccacatgggagttggtggagatgactcctggtcaccc
agcttacacaaggagtatgctgtcgagcctggagagtacaagttttctgttctgctagcg
cctgtgctgcccaacaaggaggtcacagctccggagacagctgcaagcttgtggcggcag
caagtgattgatcattttctggaaataaggtgcaggactactgtctag
DBGET
integrated database retrieval system
