Coccomyxa subellipsoidea: COCSUDRAFT_21258
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Entry
COCSUDRAFT_21258 CDS
T02914
Name
(RefSeq) Coatomer, alpha subunit
KO
K05236
coatomer subunit alpha
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_21258
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csl04147
]
COCSUDRAFT_21258
Membrane trafficking [BR:
csl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
COCSUDRAFT_21258
Exosome [BR:
csl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
COCSUDRAFT_21258
Exosomal proteins of bladder cancer cells
COCSUDRAFT_21258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
ENTH
TorS_sensor_domain
HI0933_like
Nup160
Motif
Other DBs
NCBI-GeneID:
17045190
NCBI-ProteinID:
XP_005651719
JGI:
21258
UniProt:
I0Z956
LinkDB
All DBs
AA seq
1233 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTVQFHQEYPWVVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMSACFHPKDDLVVSASLDQTVRVWDISGLRKKTVAPGGEDML
RLPQMNSDLFGGGDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAW
EVDTLRGHVNNVSCVMFHARQDIIVSNSEDKSIRVWDMSKRTGVQTFRREHDRFWIMAAH
SEVNLLAAGHDSGMIVFKLERERPAYATHGETLFYVKERHLRSYDYTNQRDSPLISIRRI
GSSGTNSGPRTLSYNPAENAVLLTSDVDGGSYELYLIPKDANGASVVSSTLSEPKRGMGG
SAVFIARNRFAVLDKSSNQLLIKNLQNEITKKCAAPAGAPTDAIFYAGTGTLLCRSEDKV
VLFDVQQRTSVADLSTPFIKYVVWSGDMNHVALLSKHAIIIANKRLGQASTVHETIRVKS
AAWDDSGVLIYTTLNHIKYCLPNGDSGIIRTLDVPVYITKVFGNTIYCLDRDGKNRQIEV
DTTEYVFKLALLQRKFDQVLAMIRGSQLCGQSIIAYLQSKGFPEVALHFVQDERTRFMLA
IECGNIEVALRSAQELDDKETWHRLGVEALRQGNHQIVEYSYQKTKNFERLSFLYLITGN
LEKLAKMLKISEMRNDVMGSFHNALYLGDIRERIRILEEAGQGALAYVTAATHDLEEDAA
RIEESLAPELVAELRAGLQPDARLLLPPHPILKEDNWPLLTVSKGFFESLAAGEAGKGDV
ELEDEDLDAGAWGDPDLDLEPHEDGDANGEADIDRAEGDEDEDEEGGWEMEDLELPPEVM
QPVAVAAESAAFAAPMPGVPPSQRWLQKGNLAADHVAAGAFDSAMRLLNRQLGIGNFEPL
KAHFLEVFSGAQASLPALPGIGALPVALDRGWNSADERKLPTSPALPYSLGMLEEKLKAM
YKCVTEGKFSEALRQVNVLLALIPLTIVDTRREVDEVKELISIAREYNIGLRCEMERKAL
AEDPKRAAELAAYFTHAKMQPGHVVLSLRSAMTQFYKLENFATAAIFARRLLEMNAPAKI
ATQARQVLTLCEQKGSDKVQLEYDPRNPFDICSLTFTPIYRQGLKTLGNQYVEDPYTKAR
FQMECSGKISPVGNLAIIGAGASGLMCSHTQTR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaaatttgagacaaagtccaatcgggtgaagggtctctccttccatccaaag
aggccatggattctggcgtcattgcacagcggggttatacagctatgggactatcgcatg
ggaacgctgatagaccgatttgacgagcacgatggaccggttcgtggggtgcattttcac
aagtctcagcctttgtttgtgtctggtggtgacgattacaagataaaggtgtggaactac
aagcttcgacgatgtcttttcacgctactggggcatctggactacatccgtacagtgcag
ttccatcaggagtacccctgggtggtctctgccagcgacgaccagacgatcaggatatgg
aactggcagagtcggacctgcatcagtgtgttgacagggcacaaccactatgtgatgtcc
gcctgcttccatccaaaggacgatttggtggtgtctgccagcctggaccagactgtgcgt
gtttgggacatcagcggcctcaggaaaaagactgtcgcccccggaggcgaggacatgctg
cggctgccacagatgaactcggatctttttggtggcggggatgctgtggtgaagtatgtg
ctggagggacatgaccggggcgtcaattgggcggcgttccacccgacactgccgctcatc
gtgtcaggcgcagacgaccggcaggtcaagctttggcggatgaatgatacaaaggcgtgg
gaggtggacaccttgagagggcacgtgaacaatgtctcctgcgtcatgttccatgcacgg
caggacatcattgtgtccaattcggaggacaagagcatccgcgtgtgggacatgtccaag
cgcacgggcgtgcagaccttcaggcgcgagcacgaccgcttctggatcatggccgcgcac
tccgaagtcaacctgctggctgcaggccacgacagcggcatgattgtgttcaagcttgag
agggaacgcccagcgtatgcgacgcacggggagacgctgttctatgtcaaggagcgtcac
ctgcgttcgtatgactacaccaaccagcgcgacagccccctcatctcgatccgccgcatc
ggcagctctggcaccaactctgggccgcgcacgctgagctacaatccggcagaaaacgcc
gtgctgctgacctcggacgtggacggcggctcctacgagctctacctcatccccaaggac
gccaatggagcttcggtggtgagcagcaccctcagcgaaccaaaacggggcatgggcggt
tcggcggtgttcatagcgcgcaaccgcttcgcggtgctggacaagagctccaaccagctg
ctcatcaagaacctgcagaacgagatcaccaagaagtgcgccgccccggccggcgccccc
accgatgccatcttctatgccggcaccggcaccctgctctgccgctccgaggacaaggtg
gtgctgtttgatgtgcagcagcgcacgtcggtggcagacctgagcacgcccttcatcaag
tacgtggtgtggtcgggcgacatgaaccacgtagcgctcctgtccaagcacgccatcatc
atcgccaacaagcgccttggccaggcctccaccgtgcacgagacgatccgggtgaagagc
gcggcgtgggacgacagcggggtgctgatctacacgacgctgaaccacatcaagtactgt
ctgcccaacggcgactctggcattatccgcaccctggacgtccccgtctacatcaccaag
gtcttcggcaacaccatctactgcctcgaccgcgacggcaagaaccgccagatcgaggtg
gacacgacggagtatgtgttcaagctggcgctgctgcagcgcaaattcgaccaggtgctg
gccatgatccggggcagtcagctgtgcgggcagtccatcatcgcctacctgcagtccaag
ggcttccccgaggtcgcgctgcattttgtgcaggacgagcgcacgcgcttcatgctcgcc
attgagtgcggcaacattgaggtcgccctgcgctccgcccaggagctggatgacaaggag
acgtggcaccggctgggagtggaggctctgcggcaggggaaccaccagattgtggagtac
agctaccagaagaccaagaactttgagcgcctctccttcctctacctcatcactggcaac
ctggagaagctggccaagatgctcaagatcagcgagatgcgcaacgacgttatgggctcc
ttccacaatgccctctaccttggggacatccgcgagcgcatccgcatcctcgaggaggcc
ggccaaggcgcgctggcgtacgtgacggcggcgacgcacgatctggaggaggacgcggcg
cggatcgaggaatcgctcgcacccgagctggtggcggagctgcgcgcgggcctgcagccg
gacgcgcgcctgctgctgccgccgcaccccatcctcaaggaggacaactggcccctgctc
accgtctccaagggcttcttcgagtccctcgccgccggcgaggcgggcaagggagatgtt
gagctggaggacgaggatctggacgcgggcgcatggggcgatccggacctcgacctggag
ccgcacgaggacggcgacgccaacggagaggccgacatagaccgcgccgagggagacgag
gacgaagacgaggagggcggctgggagatggaggatctggagctgccgccagaggtcatg
cagccggtggcggtggcggccgagtcggcggcgtttgccgcgccaatgccgggagtgccg
ccctcgcagcgctggctgcagaagggcaacctggccgccgaccacgtggcagccggcgca
tttgactccgccatgcgcctgctcaacaggcaattgggcatcggcaactttgagccgctg
aaggcgcacttcttggaggtgtttagcggcgcgcaggcgtcgctgccagccctgccgggc
atcggcgcgctcccggtggccctggaccgcggctggaacagcgccgacgagcgcaagctg
cccaccagccccgccttgccgtactcgctgggcatgctggaggagaagctgaaggcgatg
tacaagtgtgtgacggagggcaagttcagcgaggccctgcgccaggtcaacgtgctgctg
gcgcttatccccctcaccatcgtggacacgcgccgcgaagtcgacgaggtcaaggagctc
atttccatcgccagggagtacaacattgggctgcggtgcgagatggagcgcaaggcgctg
gcggaggaccccaagcgcgcggctgagctggcggcctacttcacgcacgccaagatgcag
ccgggccacgtggtgctctccctgcgctccgccatgacccaattctacaagcttgagaac
tttgccaccgccgccatctttgcgcgccgcctgctcgagatgaacgcccccgccaagata
gcgacgcaagcgcggcaggtgctgacgctgtgcgagcagaagggcagcgacaaggtgcag
ctggagtacgacccgcgcaaccccttcgacatctgctccctcaccttcacgcccatctac
aggcaaggcctgaagacattggggaaccagtatgtggaggacccctacacaaaggccaga
ttccagatggagtgctctggcaagatcagccccgtgggcaacctggccatcatcggcgct
ggcgcctctgggctcatgtgctctcacacgcagacccgatga
DBGET
integrated database retrieval system
