Coccomyxa subellipsoidea: COCSUDRAFT_27513
Help
Entry
COCSUDRAFT_27513 CDS
T02914
Name
(RefSeq) translation elongation factor
KO
K03231
elongation factor 1-alpha
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCSUDRAFT_27513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_27513
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_27513
03012 Translation factors [BR:
csl03012
]
COCSUDRAFT_27513
04131 Membrane trafficking [BR:
csl04131
]
COCSUDRAFT_27513
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csl04147
]
COCSUDRAFT_27513
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
COCSUDRAFT_27513
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
COCSUDRAFT_27513
Translation factors [BR:
csl03012
]
Eukaryotic type
Elongation factors
COCSUDRAFT_27513
Membrane trafficking [BR:
csl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
COCSUDRAFT_27513
Exosome [BR:
csl04147
]
Exosomal proteins
Proteins found in most exosomes
COCSUDRAFT_27513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
DUF34_NIF3
AAA_22
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
17043911
NCBI-ProteinID:
XP_005650451
JGI:
27513
UniProt:
I0Z5I8
LinkDB
All DBs
AA seq
446 aa
AA seq
DB search
MGKEKLHLNIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIEKFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETPKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTP
GGFEAGISKDGQTREHALLAYTLGVKQMIVALNKMDATEPKYDQKRYDEIVKEVGNYIKK
VGYNPAKVNFVPISGFQGDNMIERSTNLGWYKGLTLLEALDAIDPPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVVFAPSGLTTEVKSVEMHHESLPEAAPGDNVGFNV
KNVSVKELKRGFVASDSKNDPAKEATNFTAQVIIMNHPGQIGNGYAPVLDCHTAHIACKF
QEITTKIDRRSGKELEAAPKFLKNGDAAYVIMVPTKPMCVEPFTMYPPLGRFAVRDMRQT
VAVGVIKAVEKKDASGKVTKAAAKKK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagctgcatttgaacattgtggtcattggtcatgtcgactccggcaag
tccaccaccaccggtcacctcatctacaagctgggtggcattgacaagcgtgtgattgag
aagttcgagaaggaggctgctgagatgaacaagcggtccttcaagtacgcctgggtgctt
gacaagctcaaggccgagcgtgagcgcggtatcaccatcgatatcgccctgtggaagttc
gagacgcccaagtactactgcactgtcatcgatgccccaggccaccgtgacttcatcaag
aacatgatcacgggaaccagccaggctgactgcgctgtgctcatcatcgactccacccct
ggtggtttcgaggccggtatctccaaggacgggcagacccgcgagcacgccctgctcgcc
tacaccctgggcgtgaagcagatgatcgtggccctgaacaagatggacgccaccgagccc
aagtacgaccagaagcggtacgacgagatcgtgaaggaggtcggcaactacatcaagaag
gtcggctacaacccggcgaaggtcaacttcgtccccatctccgggttccagggcgacaac
atgattgagcgctccaccaacctgggctggtacaagggcctcaccctgctggaggccctg
gacgccattgacccccccaagcgtccctccgacaagcccctccgcctgcccctccaggat
gtctacaagattggcggcattgggactgtaccggtgggccgtgtcgagaccggcatcatc
aagcccggcatggtggtggtgttcgctccctccggcctgaccactgaggtcaagtccgtg
gagatgcaccacgagtctctgcccgaggctgccccaggtgacaacgtgggcttcaacgtg
aagaacgtgtccgtcaaggagctgaagcgtggctttgtcgcctccgactccaagaacgac
cccgccaaggaggccaccaacttcactgcccaggtcatcatcatgaaccaccccggccag
atcggcaacggctacgcgcccgtgctggactgtcacacagcccacattgcctgcaagttc
caggagatcaccaccaagatcgaccgccgttccggaaaggagctggaggccgctcccaag
ttcctgaagaacggtgacgccgcctacgtcatcatggtgcccaccaagcccatgtgcgtg
gagcctttcacaatgtaccctcccctgggccgctttgccgtgcgtgacatgcgccagacc
gtggcagtcggcgtcatcaaggccgtcgagaagaaggacgcctctggcaaggtcaccaag
gcagctgccaagaagaagtga
DBGET
integrated database retrieval system
