Coccomyxa subellipsoidea: COCSUDRAFT_28383
Help
Entry
COCSUDRAFT_28383 CDS
T02914
Name
(RefSeq) Sec63-domain-containing protein
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csl03400
]
COCSUDRAFT_28383
Enzymes [BR:
csl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COCSUDRAFT_28383
DNA repair and recombination proteins [BR:
csl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
COCSUDRAFT_28383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ResIII
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
17042814
NCBI-ProteinID:
XP_005649357
JGI:
28383
UniProt:
I0Z2E4
LinkDB
All DBs
AA seq
1797 aa
AA seq
DB search
MEEWAQLAFTGYKKLNRIQSRIYPTAFGSNENLLVCAPTGAGKTNIAMIAVLREIGANMR
QGVIQKQDFKIVYVAPMKALAAEVTATFSKRLSALGIVVRELTGDMQLSKRELTETQMIV
TTPEKWDVITRKGGDVAVAQAVRLLIIDEVHLLNDERGPVIETLIARTQRQVEASQSMIR
IVGLSATLPNYKDVGLFLGVNVDTGLFYFDASYRPVPLEMQFVGVTEKRVLDAKNVMDEI
CYEKVVDSLRKGHQAMVFVHSRKDTGKTARTLITKAQNAGETDVFDCSQEDQYPFTLKEI
KRSRNRHGSYPSQELQDLFPGGIGMHHAGMLRSDRNLMEKAFADGMLKVLCTTATLAWGV
NLPAHTVIIKGTQLYDAQKGQFKNLGMLDVQQIFGRAGRPQYEDTGLGIILTQHAQLAHY
LGMLTHQLPIESQFVSNLEDNLNAEIVLGTVTNVKEACAWLSYTYLFVRMLKNPLSYGIP
WEELAADQRLDGRRKQLITDAARKLEKCKMARFDERSGQLYVTELGRVASHFYIRHKSIV
AFNELLKPHMTESEVRFLAMLAQSSEFENMAVREDELPELDALVRSACPFDVKGGPENKH
GKINILLQAYISRVRMESFSLTADMMYVSQNAPRICRALFEICLRRSWSTAAELALTLCK
AFERRLWPHAHALRQFEHALAPELLMKLEDRGLDLDRLWDMEAADIGALLRHPAAGKSIA
ACLEAFPALQLDAVLQPITRTVLRVQLTVQPTFQWRDASHGNSMQWHIWVEDSENEHVYH
SETWMLTKKMMREPQHRLAFTIPIFEPLPSQYYIRVVSDTWLQAEATLPMSFKGLILPER
HPPHTELLDLDPLPVSALDNPLYEAQYKFSHFNPIQTQAFHTLYHTDESVLLGAPTGSGK
TISAELTMLRVFNAHPGKKIIYIAPLKALVRERIKDWGQGLCKKLGKKLVELTGEYTPDM
RALMGADVIICTPEKWDGISRAWHTRSYVKQVCLLIIDEIHLLGADRGPILEVIVSRMRY
IAATMDQPIRFVGLSTALANAIDLADWLGVGPKGLFNFKPSVRPVPLECHIQGFPGKFYC
PRMATMNKPAYAAIQAHSPIKPVLVFVSSRRQTRLTALDLIGYAAADERPRQYVHCPEEE
LEQALDGNLRHTLQFGIGLHHAGLNETDRTVVENLFVAGKIQVLVATSTLAWGVNTPAHL
VIIKGTEFFDAPTRRYVDFPITDVLQMMGRAGRPQYDRHGVAVIMVHEPKKSFYKKFLYE
PFPVESSLQDQVADHFNAEVVAGTIGSKQDAIDYLTWTFFYRRLLQNPSYYNLESTEMED
VSDFLSDMVETTMATLQDAGCVTIEEDGAIGPLTMGRVASFYYLKYQTMATLHTGLHADM
TVPELLGALCAAAEYDELPVRHNEDKLNMTLSAEVRFPIDARSADDPHTKANLLLQARNL
SYVSTQAHMGRVAVPISDYVGDTKGALDNSVRVLQAITDLAADAGWLGTALSTMHLIQGL
MQARWWDENALLMLPRMEASGVQLLASRKLASLPQLLEQCRRQPAQARAALEQALGSSRA
AEEAMTVCERLPLVEMSWQAPRPSGATGRQRYVLEVAVRAARGPRGAAGKAYAPLFPKVK
EAGWWLVLGDASTQELHAIKRVSFSDRANARLSFTAGAAGSGAAPFSNLHLYLMSDAYMG
LDQVHSLDTPSRQPGQEQGSNGRGEHVPEGRTQQREGHRGDRGRGRGGQRRQQPQQRPSQ
PQTQEVQLQQGQLQAEQQEGQQRQREPRSRNRRGRGSGPGPQNTAGVAGETAGAPVP
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtgggcccagctggcattcaccggctacaagaagctgaaccgcatccagagc
cgcatctacccgacggcctttggcagcaacgagaacctgctggtgtgcgcgcccacgggg
gccggcaagaccaacatcgcgatgatcgcggtgctgcgcgagatcggcgccaacatgcgg
cagggcgtcatccagaagcaggacttcaagatcgtctatgtggcgcccatgaaagccctg
gccgctgaggtcaccgccactttctccaagcgcctctccgccctcggcatagtggtgcgg
gagctcacgggcgacatgcagctgagcaagcgcgagctgacggagacgcagatgatcgtg
accacgcccgagaagtgggacgtcatcacgcgcaagggcggtgacgtggcggtggcccag
gccgtgcgcctgctcatcatcgacgaggtgcacctgctcaatgacgagcgcggtcccgtc
atcgagaccctcatcgcgcgcacgcagcgccaggtggaggcgagccagagcatgatccgc
attgtaggcctgagcgcaacgctgcccaactacaaggacgtgggtctgtttctgggcgtc
aatgtcgacacaggcctcttctacttcgatgcctcgtatcggcctgttcccctggagatg
cagttcgtgggcgtcactgagaagagggtgctggacgccaaaaacgtcatggacgaaatc
tgctatgagaaggtggtggattcactgcggaaggggcatcaggcgatggtgtttgtgcac
tcgcgcaaggacacgggcaagactgcgcgcacgctgatcaccaaagcgcagaacgctggc
gagacggatgtctttgactgctcccaggaggaccagtacccgttcaccctcaaagaaatc
aagcgctcacgcaacaggcatggctcttatccttctcaggagttgcaagatctattccca
gggggcataggcatgcaccatgccggcatgctgcgctcagaccgcaacctcatggagaaa
gcgtttgctgacggcatgctgaaggtcctgtgcacaactgccacgctggcgtggggtgtc
aacctgccggcgcacaccgtcatcatcaagggcacgcagctgtacgacgcgcagaagggc
caattcaagaatctgggcatgctggatgtgcagcaaatttttgggcgggcggggcggccg
caatatgaggacaccgggctgggcatcatactgacacagcacgcgcagctggcccactac
ctgggcatgctgactcatcagctgcccattgagtcccagtttgtcagcaacctggaggac
aacctcaacgctgagattgtgctgggcacggtgacaaatgtgaaggaggcgtgcgcgtgg
ctgtcgtacacgtacctgtttgtgcgcatgctgaagaacccgctgtcctacggcattccc
tgggaggagctggcagccgaccagcgcctggacggccggcgcaagcagctcatcaccgac
gcagcgcgcaagctggagaagtgcaagatggcacgctttgacgagcggagcgggcagctg
tatgtgacagagctgggccgggtggcgtcgcacttttacatccgccacaagtccatcgtg
gccttcaacgagcttctgaagccccacatgactgagtctgaggtgcgctttctggccatg
ctggcgcagagcagcgagtttgaaaacatggcggtgcgggaggatgagctgccagagctg
gacgctcttgtgcgcagcgcgtgcccctttgatgtcaagggcggcccagagaacaagcac
ggcaagatcaacatcctgcttcaggcgtacatctcccgggtgcgcatggagagcttctcg
ctgactgcggacatgatgtacgtgagccagaatgcgccgcgcatctgccgagcgctgttt
gagatctgcctgcgccgcagctggtccaccgctgccgagctggcactcaccctctgcaag
gcgtttgagcggcggctgtggccgcacgcgcatgcgctgcgccagtttgagcacgcgctg
gcgccggagctgctgatgaagctggaggaccggggcctggacctggaccggctgtgggac
atggaggctgccgacatcggggcgctgctgcgccacccggccgctggcaaatccatcgcc
gcctgcctcgaggcgttccccgcgctccagctggacgccgtgctgcagcccatcaccagg
acggtgctgcgggtgcaactgacggtgcagccgacgtttcagtggcgggacgcgtcgcac
ggcaacagcatgcagtggcacatctgggtggaggacagcgagaacgagcacgtgtaccac
agcgagacctggatgctcaccaagaagatgatgcgcgagccgcagcacagactggccttc
accatccccatctttgagccgctgccctcccagtactacatccgggtggtgtcggatacg
tggctgcaggcagaggcaacattgcccatgtcattcaagggcctaattctgccggagcgc
cacccgccccacaccgagctccttgacctggacccactaccagtctctgcgttggacaac
cctctttacgaggcccagtacaagttctctcacttcaaccccatccagacgcaggcgttc
cacacgctgtaccacacggatgagagcgtgctgctgggtgcacccactgggtcgggcaag
accatcagcgctgagctgaccatgctgcgcgtgttcaacgcccacccgggcaagaagatc
atctacatagcacctctcaaggcgctggtgcgggagcggataaaggactggggccagggg
ctgtgcaagaagctgggcaagaagctggtggagctgactggggagtacacccccgacatg
cgcgcgctgatgggcgctgacgtcatcatctgcacgcccgagaagtgggacggcatcagc
cgcgcctggcacacccgctcctacgtcaagcaagtctgcctgctcatcatcgacgagatc
cacctcctgggcgccgacaggggtcctatactggaggtgatagtgtcccggatgcgctac
attgcggccacaatggaccagccgatccgctttgtggggctctccactgcgctggccaac
gccattgacctggcagactggctcggcgtcggccccaagggtctgttcaacttcaagccg
agcgtgcgccctgtcccgctggaatgccacatccagggcttccccggcaagttctattgc
ccgcgcatggccaccatgaacaagccggcctatgccgccatccaggcgcactcgcccata
aagccggtgctggtgtttgtgagctcgcggcgccagacgcggctgacggcgctggacctc
atcggctacgcggcggccgatgagcggccgcgccaatatgtgcactgccccgaagaggag
ctcgagcaggcgctggatggcaacctgcgccacacgctgcagtttggcattgggctgcac
catgccggcctcaacgagaccgaccgcaccgtagtcgagaatctgttcgttgccggcaag
atccaggttttggtggcaacgagcactctggcctggggtgtcaatacaccagcacacctg
gtcatcatcaagggcacagagttctttgatgctcccaccaggcgctacgttgacttcccc
ataacggacgtgctgcagatgatggggcgagcggggcggccgcagtatgaccggcatggc
gtggccgtaatcatggtgcacgagcccaaaaagtccttctacaagaagttcctctacgag
cccttccctgtcgagtccagcctgcaggaccaggtggcggaccacttcaatgctgaggtg
gtggcgggcacaataggctccaagcaggacgcgatagactacctcacctggaccttcttc
taccggcgcctgctgcagaatccgtcctactacaacctggagagcacagagatggaggac
gtcagcgacttcctgtccgacatggtggaaaccaccatggccaccctgcaggatgctggc
tgcgtgacaatcgaggaggatggcgcgattgggcccctgacgatggggcgagtggcaagc
ttctactacctcaaataccagaccatggccaccctgcacaccggcctgcacgctgacatg
accgtgcccgagttgttgggcgcgctgtgtgcggcggcagagtatgacgagctgccggtg
cggcacaacgaggacaagctcaacatgacgctgtcggccgaagtgagattcccgatcgac
gcccgctccgccgacgacccccacaccaaagccaacctcctgctgcaggcgcgcaattta
tcctatgtgtccacgcaggcgcacatggggcgggtggcggtgccgatcagcgactacgtg
ggggacacgaagggcgcgctggacaacagcgtgcgcgtgctgcaggccatcaccgacctg
gcagccgacgccggatggctgggcaccgccctctccaccatgcacctcatccagggcctc
atgcaggctcgctggtgggacgagaatgcgctgctgatgctgccgcgcatggaggcgagc
ggggtgcagctgctggcttccaggaagctggcgtcgctgccgcagcttctggaacagtgc
cgtcggcagcctgcccaggcccgggctgccctggagcaagccctgggcagctcaagggca
gccgaggaagccatgacggtgtgcgagcggctgcctctggtggagatgtcctggcaggcg
cccaggccgagtggggcgaccggcaggcagcgctatgtgttggaagtggcagtccgagca
gcgaggggtcctcgaggagcggccggaaaggcctatgcccccctcttccccaaggtgaag
gaggcaggatggtggctggtgctgggggatgcgagcacacaagagctgcatgccataaag
cgcgtgtccttctccgacagggccaatgcgcgactcagctttactgcaggcgccgctggc
tccggcgctgcgcccttctccaacctgcacctgtacctgatgtcggacgcctacatgggg
ctggaccaagtgcacagcttggacactcccagcagacagcctggccaggagcagggcagc
aatggcagaggggaacatgtgcctgaggggcgcacacagcagagggagggtcacagaggc
gataggggaaggggacgtggcggccaacggcgccagcagccgcagcagagaccgtcgcag
ccgcagacgcaggaagttcagctgcagcagggtcagctgcaggcagagcagcaggaaggg
cagcagcggcagcgggagcccaggtcccgcaacaggcgcgggcggggatcggggcccggg
ccgcagaacacagcaggggttgctggggaaacagcaggtgctcctgtgccatga
DBGET
integrated database retrieval system