KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_47906
Entry
COCSUDRAFT_47906  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    COCSUDRAFT_47906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csl03019]
    COCSUDRAFT_47906
Messenger RNA biogenesis [BR:csl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     COCSUDRAFT_47906
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1
Other DBs
NCBI-GeneID: 17040469
NCBI-ProteinID: XP_005647027
JGI: 47906
UniProt: I0YVR4
LinkDB
AA seq 488 aa
MQGQVLRHKRKWRGEWQRFSCRRRRRPLSEYRPDSDLARACDEASAREGVEANGKSRLHL
VVLGHVDAGKSTLMGRLLHELGHISQKTVHKAQRDATAAGKGSFAWAWLLDERAEERSRG
VTVDVASTFFETPKHLVRLLDAPGHRDFVPNMIAGAAQADAALLLVDGSVGGFEAGFDAG
GGMGGGQTREHAQLARSLGIEQLAVVISKLDTCAFSQERFEQVKGALLPFLRTSGFRESQ
VQWLPAVGPSGQNLTDHPTEPALSSWWRGPSVVAAIDAFRPAARALERSLRMPIADVFKG
LRGGLAVGGKLEGGALKVGTRVLVQPGGHQAMVRSVEMDGQAAALARAGDTADVVLAGVD
ATALAVGAVVCHPDWPVPVAGRLEARIVVLDLPLPILKGRQVSVHVHTAQESGQISRLVS
VLNPKTGEVTKARPRALTKGQTAVVEISVARPMCVELYTDYRALGRIALRDGGHTIAVGI
IVSLLDSD
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgcaaggccaagtgttgcggcacaagaggaagtggagaggggagtggcagcgattcagc
tgcaggcggaggcggcggccgctgtcagagtacaggccggacagtgacctggcaagagca
tgcgacgaggcgagtgcgcgggaaggtgtagaggctaatggcaaatcgcggctgcatctg
gtggtgctgggccatgtagatgctggcaagtccacgctcatgggccgcctgctgcatgaa
ctagggcacatcagccagaaaactgtgcacaaagcgcagcgcgatgcaacggcggccggg
aaggggtcgtttgcatgggcgtggctgttggatgagagggccgaggagcgctcgaggggg
gtcaccgtcgatgtcgcatccaccttcttcgagaccccaaagcacctggtcaggctgctg
gatgcgcccggccaccgcgactttgtgcccaacatgattgctggggcagcccaggcggac
gctgcgctgctcttggtggatggatcggtggggggattcgaggcgggctttgatgcgggc
ggcggcatgggtggcgggcagacgcgggagcacgcgcagctggcgcgcagcctcggcatt
gagcagctcgccgtcgtcatctccaagctggacacctgcgccttctcccaggagcggttt
gagcaggtcaagggggcgcttctgcctttcctgcgcacatcaggcttcagggagagccag
gtgcagtggctgccggccgtgggcccctcagggcagaacctgacggatcaccccactgag
ccggcactgagcagctggtggcgggggccctcggtggtggccgccatcgacgcattccgg
ccggcggcgcgcgcattggagcggtcgctgcgcatgcccattgccgacgtgttcaaggga
ttgcgcgggggattggccgtcggcggcaagctggagggcggcgctctcaaggtgggcacg
agggtgctggtgcagccgggcggccaccaggcgatggtgcgcagtgtggagatggatgga
caggccgcggcgctggcgagggctggcgacacagcggacgtggtgctggcgggtgttgat
gccacggcgctggcggtgggcgcggttgtgtgccacccggactggcccgtgccggtggcc
ggccggttggaggcgcgcatcgtcgtgctggacctcccgctgcccatcctcaaaggccgc
caggtgagcgtgcatgtgcacacggcgcaggagtccggccagatttcgcggctggtctct
gtgctgaatccaaagacgggcgaggtgacaaaggcgcgaccgcgcgctctgaccaagggg
cagacggcggtggtggagatcagcgtggctcggcccatgtgcgtggagctgtacaccgac
tacagagccctcggccgcattgccctgagggatggcgggcacaccattgcagtgggcata
attgtgtcgctcctcgactctgactga

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