Coccomyxa subellipsoidea: COCSUDRAFT_47906
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Entry
COCSUDRAFT_47906 CDS
T02914
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSUDRAFT_47906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_47906
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
COCSUDRAFT_47906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
17040469
NCBI-ProteinID:
XP_005647027
JGI:
47906
UniProt:
I0YVR4
LinkDB
All DBs
AA seq
488 aa
AA seq
DB search
MQGQVLRHKRKWRGEWQRFSCRRRRRPLSEYRPDSDLARACDEASAREGVEANGKSRLHL
VVLGHVDAGKSTLMGRLLHELGHISQKTVHKAQRDATAAGKGSFAWAWLLDERAEERSRG
VTVDVASTFFETPKHLVRLLDAPGHRDFVPNMIAGAAQADAALLLVDGSVGGFEAGFDAG
GGMGGGQTREHAQLARSLGIEQLAVVISKLDTCAFSQERFEQVKGALLPFLRTSGFRESQ
VQWLPAVGPSGQNLTDHPTEPALSSWWRGPSVVAAIDAFRPAARALERSLRMPIADVFKG
LRGGLAVGGKLEGGALKVGTRVLVQPGGHQAMVRSVEMDGQAAALARAGDTADVVLAGVD
ATALAVGAVVCHPDWPVPVAGRLEARIVVLDLPLPILKGRQVSVHVHTAQESGQISRLVS
VLNPKTGEVTKARPRALTKGQTAVVEISVARPMCVELYTDYRALGRIALRDGGHTIAVGI
IVSLLDSD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggccaagtgttgcggcacaagaggaagtggagaggggagtggcagcgattcagc
tgcaggcggaggcggcggccgctgtcagagtacaggccggacagtgacctggcaagagca
tgcgacgaggcgagtgcgcgggaaggtgtagaggctaatggcaaatcgcggctgcatctg
gtggtgctgggccatgtagatgctggcaagtccacgctcatgggccgcctgctgcatgaa
ctagggcacatcagccagaaaactgtgcacaaagcgcagcgcgatgcaacggcggccggg
aaggggtcgtttgcatgggcgtggctgttggatgagagggccgaggagcgctcgaggggg
gtcaccgtcgatgtcgcatccaccttcttcgagaccccaaagcacctggtcaggctgctg
gatgcgcccggccaccgcgactttgtgcccaacatgattgctggggcagcccaggcggac
gctgcgctgctcttggtggatggatcggtggggggattcgaggcgggctttgatgcgggc
ggcggcatgggtggcgggcagacgcgggagcacgcgcagctggcgcgcagcctcggcatt
gagcagctcgccgtcgtcatctccaagctggacacctgcgccttctcccaggagcggttt
gagcaggtcaagggggcgcttctgcctttcctgcgcacatcaggcttcagggagagccag
gtgcagtggctgccggccgtgggcccctcagggcagaacctgacggatcaccccactgag
ccggcactgagcagctggtggcgggggccctcggtggtggccgccatcgacgcattccgg
ccggcggcgcgcgcattggagcggtcgctgcgcatgcccattgccgacgtgttcaaggga
ttgcgcgggggattggccgtcggcggcaagctggagggcggcgctctcaaggtgggcacg
agggtgctggtgcagccgggcggccaccaggcgatggtgcgcagtgtggagatggatgga
caggccgcggcgctggcgagggctggcgacacagcggacgtggtgctggcgggtgttgat
gccacggcgctggcggtgggcgcggttgtgtgccacccggactggcccgtgccggtggcc
ggccggttggaggcgcgcatcgtcgtgctggacctcccgctgcccatcctcaaaggccgc
caggtgagcgtgcatgtgcacacggcgcaggagtccggccagatttcgcggctggtctct
gtgctgaatccaaagacgggcgaggtgacaaaggcgcgaccgcgcgctctgaccaagggg
cagacggcggtggtggagatcagcgtggctcggcccatgtgcgtggagctgtacaccgac
tacagagccctcggccgcattgccctgagggatggcgggcacaccattgcagtgggcata
attgtgtcgctcctcgactctgactga
DBGET
integrated database retrieval system