Coccomyxa subellipsoidea: COCSUDRAFT_48485
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Entry
COCSUDRAFT_48485 CDS
T02914
Name
(RefSeq) PLP-dependent transferase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00250
Alanine, aspartate and glutamate metabolism
csl00410
beta-Alanine metabolism
csl00430
Taurine and hypotaurine metabolism
csl00650
Butanoate metabolism
csl01100
Metabolic pathways
csl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
COCSUDRAFT_48485
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
COCSUDRAFT_48485
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
COCSUDRAFT_48485
00430 Taurine and hypotaurine metabolism
COCSUDRAFT_48485
Enzymes [BR:
csl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
COCSUDRAFT_48485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Cellulase
SepSecS
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
17038332
NCBI-ProteinID:
XP_005644900
JGI:
48485
UniProt:
I0YPN7
LinkDB
All DBs
AA seq
1014 aa
AA seq
DB search
MQVALKYSTRTSHPLFFNQLYGGPEPVGIAGEWLAVATNTNAHTFEVAPVFTLAETEVLA
KMARVVGGAYAEANDGLFVPGGSIANLYGMHLARNRADPGFKSRGAVGGPRLVAFTSKHA
HYSYLKAASMTGLGSDNLIVVPCDENGGMISSELEAAIVAAKAKGGVPFFVGTTAGTTVL
GAFDPLPAIAEICQRHELWHHVDGTWGAAALLSRTHRHLMAGCERSDSLSWNPHKMMAYG
DSGYEARLDHAMQMAQYLEGKILGDVDAFVLVHPRSFTNVCFYWIPPSLRPLNLKTASKS
ELDELGKVAPKLKHHMQKNGDAMIGFQPLGPWPNFFRIVFASAWSLAEKDLDALLDRMDA
LGRNLYSSESKRLAGKTQLLQSYKSKYKFFLRGCLAQLEAPAPSVEAPFPALQADAPAVL
EASPPVATIEAQAPIEAQAAAGRKSLALSTGPGPKGPTLIDEQGNEIILKGLSVFGFNSV
WTMIGNLTGGSDAISRDLGHVMYRMKMLGFNAIRLPFTFAALAKEPVDYTGKCKPVSAAE
VEATLVPPTVPSGLKASGLTDLPQAPPALPEDTCNAYLPNDSTFHRYLWVIRYFASQGFY
VVVDYQSMKGGPEDNIFDKEAWMAQWVDLVSQLVQYAPETNGRLLLDLINEPDGFGMTWE
AQADKPSLGSYYLDLGDKLNAVCPSCIFLLEGTGQSKFLGVDWGTGFATDSNVIQTVGIS
DPNGFFQALVQKPWVDQVALAPHLYCPVAAGRPRLFSDGPTMWNALTTMVGYLNSEGYCY
NNNCHRFPIVLSEFGSALNERTELDCFTSLTNYMTSTGLANDGRHSPIQSWFYWAWNAET
AITGGLVGDDLVSILWNKIAALTGGTTQWPFGLGLRPWYLQGFEEVNGTSAVPNSDIPSW
VVTEAQAAQHRGQAVDVNDRFTIPVSGAVSGANPLTSGQQTGEGAGSGSNAAAGGGSSGS
RHLSSGAIAGITIGTLVGVAGIAAAAVFAARKVAASKAQPENMSTFNQAFNSAA
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggcattgaagtactccacacgcacgagccaccctctctttttcaaccagcta
tacgggggaccagagcctgtgggcattgcaggtgaatggttggcagtggccaccaatacc
aatgcgcacacctttgaagttgcaccggtcttcaccttggctgagactgaagtgcttgcc
aagatggctcgggtggtcggaggtgcatatgcagaggcaaatgacggcctctttgtgcca
ggaggatccattgccaatctgtatggaatgcatttagcgcgcaacagggcagaccccggc
tttaaaagcagaggcgctgtgggcggccctcgcttggtggccttcacatctaagcacgct
cactactcctacctcaaagcagcgagtatgactggtcttggcagtgacaacctcattgtg
gtgccctgtgatgaaaatgggggaatgatttcatcagagttggaagctgccatagtggca
gcaaaggccaaaggcggcgttccattctttgtggggaccactgctggcacaacagtcctg
ggcgcatttgaccccctgcctgcaattgctgagatctgtcagcggcatgaattgtggcac
catgtcgatggcacatggggtgcagcggcgcttctaagccgtacacatcggcacctcatg
gccggctgtgagcgctcagactcactttcctggaacccccacaaaatgatggcatatggg
gacagcggctatgaggcccgcctcgatcatgcaatgcagatggcgcaatacttggaaggc
aagatactgggagatgtagatgctttcgtgcttgtgcaccctcgcagctttacaaatgtc
tgcttctactggataccgccgagcttgcgtccgctcaatttgaagaccgccagcaagtca
gaactagatgaattgggcaaggtggctcctaagttgaagcaccacatgcagaagaatggg
gatgccatgattgggtttcagccattaggaccttggccgaacttcttcagaattgtcttt
gcgagcgcttggagcctcgcagagaaagacttggacgccttgcttgaccgcatggatgct
ctaggaaggaatctctactcgtcagagagcaagcgattggcaggcaagactcaattgctg
cagtcctacaagtctaaatacaaatttttcctgcgaggctgtcttgcacagttggaagca
ccagcaccgagcgttgaggcacccttcccagcactccaagcagatgcacctgctgtccta
gaagcctcgccaccagtggctacaattgaggcacaggcaccgatcgaagctcaggcggca
gctgggaggaagtctctggcgctgtccactgggccaggccccaaggggcccaccctcatt
gatgagcagggcaacgagatcatcctcaagggcctctccgtctttggcttcaactctgtg
tggacaatgatcggtaatctgacaggcggctcggacgcgattagccgcgaccttggccac
gtcatgtaccgcatgaagatgctcggcttcaacgccatccgcctccccttcaccttcgca
gccctggccaaggagccggtggactacacgggaaagtgcaagccggtgagcgcggcggag
gttgaggccacgctggtgccgcccaccgttccctccggcctcaaggcctccgggcttaca
gacctgccccaggcgccgcccgcgctgccggaggacacctgcaacgcctacctgcccaac
gactccaccttccaccgctacctctgggtcatccggtactttgcgagccagggcttctac
gtggtggtggactaccagagcatgaagggcggccccgaggacaacatctttgacaaggag
gcctggatggcgcagtgggtggacctggtgtcccagctggtgcagtacgcgcccgagacc
aatggccgcctcctgctcgacctcatcaacgagcccgacggttttgggatgacatgggag
gcgcaggctgacaagccgtcgctgggcagctactacctggacctgggcgacaagctgaac
gcagtctgccccagctgcatcttcctgctggagggcaccggccagtccaagttcctgggc
gtcgactggggcaccggctttgccactgacagcaatgtgatccagacagtgggcatctct
gaccccaatggcttcttccaggcgctcgtgcagaagccctgggtggaccaggtcgccctg
gctccccacctctactgccccgtcgcggccggccggccgcgcctgttttccgacggcccc
acgatgtggaacgcgctgaccaccatggttggatacctcaactccgagggctactgctac
aacaacaattgccaccgcttcccgatcgtgctgtcggagtttgggagcgcgctgaacgag
cgcactgagctggactgcttcaccagcctgaccaactacatgacctccacgggcctcgcc
aacgacggccgccactcccccatccagtcctggttctactgggcgtggaacgcagagaca
gccatcacgggtggcctggtcggggacgacttagtgagcatcctgtggaacaagattgcc
gcgctcaccggcggcaccacccagtggcccttcggcctcggcctgcgcccctggtacctg
cagggctttgaggaggtgaacggcacgagcgcggtccccaactcggacattccctcgtgg
gtggtcacggaggcacaggcagcgcagcaccgcggccaggcggtggatgtgaacgaccgc
ttcaccatccccgtcagcggcgccgtctccggcgccaaccccctcacctccggccagcag
acaggcgagggagcgggctcgggcagcaacgcggcggccggcggcggcagcagcggcagc
cggcacctgagcagcggcgcgattgccggcattaccatcggcacactggtcggcgtggcc
ggcatcgcagcggctgccgtgtttgcagcgcgcaaagttgcggccagcaaggcgcagccc
gagaacatgtccaccttcaaccaggccttcaacagcgccgcctga
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