Coccomyxa subellipsoidea: COCSUDRAFT_55543
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Entry
COCSUDRAFT_55543 CDS
T02914
Name
(RefSeq) hypothetical protein
Organism
csl
Coccomyxa subellipsoidea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUN
PX
Motif
Other DBs
NCBI-GeneID:
17045560
NCBI-ProteinID:
XP_005652089
JGI:
55543
UniProt:
I0ZA76
LinkDB
All DBs
AA seq
1910 aa
AA seq
DB search
MERAFPVLMSPGVDAVRSQEAVGLEAVSRLWIQQGAQDGSLGFLVSKVRSQPQVYTAYLN
SAPMRSKEATAEFEAAVLPLKGTVTFAELQAAIASSKASAGSAASGTDAATIEARDAAPH
VAPPKQPSPARQDQESASGSDTDTAQPASARLGQLWEAQWSRLPMGQAASSAPHGADANM
AETEGPMKAHAPGRRHPMGDAGHISVSMSAPEAANAARQHVSQPDSVAVRLEIQEASDGG
GAFVTLHLDTRGSDQAGKGLQQPSRQSRLAQQFDQVMQSQASAAALSGMQSLAGLLKGPK
WTRQGPPIPTAAPSSQEESAAEAAQDKEGADRAITSSLASDAAVQEDAPAKLVVVQISAS
EAGAEHEAIIQPCRVTLRILGDASTAAAVPIPSAPGSAPHGRLGAFSGLFRSSKGGSQTP
VTDPGSILPLREVAAETTDPEIPAAQSLAGADPQATSTTSDTALAGQRQNPAWAVAGAFG
SLYGFVSHAADSAVRPGQQAGSKEAHAASSNRGPEASTSSRASAKPQGSRSPRALPTPSK
QEEEEAAAAEELAGVGPAADIMGPGDTDLQRVCSGVEALLKHGLRPATPRDKWTQYLPGR
RTGPMDMLQEAQRLATVEEGKGWGLEGVEALAGGHGSEAALQMWIRSSLNERALGSRLRA
LCSTPTLLQAWYSRSAVLRQEEAAGQLLGVLMGLDAVKVLLPVETDSVKQPTSGPVGFLA
GVTNFLPGRYSTAAASPSVKGPALPPMTSSPKMRKRTRAVTIDEALQEPRPSAAAAAAAA
ADRSPAASELLPSSLGALLLSPMSSADISAEPLSPTTTAAFQALRARHLAGVNMQASPED
RAAESDLLAHLLQQAGLSSEAALAPDLAGLHSRDYPGEPGVSLNGTGEAGALEEPRPDLA
AFLDDLLSTPEDSMFAPQLGGEPLQFAGDPGKDPPPWQPLKPQSRGNTIAEAPSTSRDAG
PAAAGSPLLAAQEVASYNSAEERRKASEAAAAASERVRSRLARRRVTTSDASEPQTPPAA
EPWRQQEDVSALSTAGSTSTMLGARSQEGDFYRLLDSEEPAPRRSFHLDKNEQLPRSFSI
AARGEQLQASNVTEQEAAEAVEAVLESEIAAQEETHPHDRDAQDSDADASPSTSVEAPNA
LKPETPPEDLVETAHAHGEYEQQLTADPVHHASVHKILEDQPSEDEAIASAAEQNPEDHT
AAIPSHELPAAAQPALARQEPSAELSYSDLTSLLSTPEGDAQPVEAPSSGAEEAWPAEHS
SADDSPAPLPKADLAQLAFGQAGPSKVGGEAAEDSGAGRQPPLPQPNPPPEPHGGEAQPA
EGTRGGASSASTAADKPSLQPEQDVSPPHSQPEDTQKPAEVAHSEPLQDPAHLTPHTGVR
GVAGAAGTAEQTPGRQPTEQQQAEIREFLASQGLHNILDGQQMDMPELQGEDIADQLSPR
EHGSQTDANLLEDMNEILMLDLGGLGGFRSPLGSPPRAGSSHFSFDDPHHPPRPPDLEPL
PPSWRIAEARPTKAPFVLFMQIARVVGAATVAEGTAEYTRYSVEVTPSDEGEAWTVHHRF
KDFIALRSALTALVGPNSLPQCWADVSKARSVTGRHRLAPEVVAARQAMLDRCLVSVVAA
GPPLSEAPPLLAFLAPADPHWDPPSQPPGTLARALPGRGQDAGAAAAQLARAGSEHASSA
SSSAEAGNRYGSLVRLLTEEPQKLAEADLIRMQRGQCAACRAPLPPPVKQSSFLGGRSAA
TGPRRCEYNARLYCHECHRGDLAELPALVLHHWDFHPRPVSTMAADYLASIADRPLLCIG
AVNPGLYARVPMLARAQDLRTRACKALAAARASGPEGADKAKRLLAGAGPRRYLLESPDF
WAMRELVELSKGAFSRLPAWLEAAAARAASLATSALLIAAAEQQQRPGRH
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcgcctttcctgttctcatgagcccgggcgtggacgcagtcaggtcccaggaa
gctgttggcttggaagctgtatcaaggctctggatccagcagggagcacaggatgggagt
ttgggcttccttgtgagcaaagtccgctcacagccgcaagtgtacactgcgtacctcaat
tctgcgcccatgcggagcaaggaagcaacggcagagttcgaagctgcagtcttgcccctc
aaggggacagtcacttttgcggagctgcaagcagccatagcaagcagcaaagcatcagcg
ggcagcgcagcttctggtacagatgctgccacaatagaggccagagatgctgcacctcat
gtggcaccccctaagcagccctccccagctcggcaggaccaggaaagtgcatcagggtca
gacactgacacggcacagccagcgagcgcgagattgggccagttgtgggaggcacaatgg
tcacgcctgcccatgggacaggcagccagctcagccccacatggagcagatgcaaacatg
gcggaaacggaaggtcctatgaaggcacatgcaccaggcagaagacaccccatgggcgat
gctgggcacattagcgtcagtatgagtgcgccagaggcagcaaatgcagctcgccagcat
gtcagccagccagactcagtagctgtgcgattggagattcaggaagcttcagatgggggc
ggtgcttttgtgactcttcacctggatacccggggaagtgaccaagctggcaagggcctt
cagcagcccagcaggcagtccaggcttgcacagcagtttgatcaggtcatgcagagccaa
gcatcggcggcagccctgtctgggatgcagtccctggctggtctcttgaagggtccgaag
tggacgaggcaggggccaccaattcccactgctgctccttcaagccaagaggagagtgca
gcagaggcagcccaggacaaagagggtgctgaccgggcgattacatcatctctggcatcg
gatgcagcagtgcaggaagatgctcctgcaaagctcgtggtagtgcagatttctgcttcg
gaggctggagcagagcacgaagcaatcattcagccatgcagggtgacactgcgcatccta
ggggatgcaagcacagcagctgcagtcccaattccttcagcgccaggatccgccccacat
ggccgcctgggagcattctcaggcttgttccgctcatcgaagggcggcagccaaacgcca
gtcactgacccgggcagcatattgccattgagggaagtggccgcagagacaacggatcct
gagattccagctgcacagagcctcgcaggcgcagatccccaagcgaccagtaccactagt
gacaccgccttggcgggacagcgtcagaacccggcgtgggcggttgcaggcgcatttggc
tctctgtacggctttgtcagccacgcggcagactcggcagtgaggcctggccaacaggcg
ggttccaaggaagcgcatgctgcctcgagcaaccggggccccgaggccagcactagcagc
agggcttctgcaaagccacagggctcaaggagccccagagcgctgcctacaccctccaag
caggaggaagaggaggcggctgccgcagaggagcttgctggtgtggggccagcagcagac
atcatgggccctggggatacggatctgcagagggtgtgctctggcgtggaggctctgctc
aagcacggcctcaggccggcgactcccagagacaaatggacgcagtacctgcctggccgc
cgaactggtcccatggacatgctgcaggaggcccagaggctggccacagtggaggagggc
aagggctggggcctggagggtgtggaagcgctggcaggagggcatggcagcgaggcggcg
ctgcagatgtggatccgcagcagcctcaatgagcgcgccctcggctcgcggctgcgcgct
ctttgcagcacaccgaccctgctgcaggcctggtactccaggagcgctgtgctgaggcag
gaggaagctgctgggcagttgctgggcgtgctgatgggcctggatgctgtcaaagtactc
ctgcctgtcgagacagactcggtaaaacagcccacgagtggacctgtgggattcttggcc
ggcgtgaccaacttcctcccaggccgctactccactgctgcagccagcccaagcgtcaag
ggaccagcattgcctcccatgacctcctctccaaagatgcgaaagcgcacgcgcgctgtg
acgatcgacgaggcactccaagagccccggccgagcgcggcagccgccgccgccgcagcg
gccgaccggtctccggccgcctccgagctgctgccgtcctccctgggagcgctgctgctg
tcccccatgtcctccgcagacatctcagcggagcccctctcccccacaaccaccgcagca
ttccaggcgctgcgagcgcgccacctggctggcgtgaacatgcaggcctcgcccgaggac
cgggccgcagagtcagacctcctggcgcacttgctgcagcaggcgggcctgtcttctgaa
gcagctctggcgccagatctggctggcttgcactcgcgggattatccgggggagccgggg
gtttcgttgaatggcacaggggaggcaggggcgttggaggagcctcgtccggatcttgct
gcgttcctggacgacctgctgtcgacgccagaggacagcatgtttgcgccgcagctgggc
ggagagccgctgcaattcgccggcgaccccggcaaggaccccccgccgtggcagccgctg
aagccccagtctcgaggaaacaccattgccgaggccccatcaacatctcgtgatgccggc
ccagccgccgccggcagccccttgctggccgcgcaagaggtggcctcctacaactcagca
gaggagcgcaggaaggcctccgaagcggctgcggcggccagcgagagagtgaggagcagg
ctggccaggaggcgggtgacgacgtcggacgccagcgaaccgcagacgccgccggctgcg
gagccgtggaggcagcaggaagacgtgagcgcactatcgacggctggatcgacatccacc
atgctgggtgctagatcgcaagagggagacttctaccggcttctggattccgaggagccg
gcaccgcgccgcagcttccacctggacaagaatgagcagctgccacgaagcttcagcata
gctgcaaggggagagcagctgcaggcttccaatgtgacagagcaggaggctgcagaggct
gtggaagctgttctggagagtgaaattgctgcacaggaagaaacccatccacatgacaga
gatgctcaggatagcgatgcagatgcttcaccaagcacctctgttgaggctccaaatgca
ctgaagccggagacgcctcctgaagacctcgttgagacggcgcatgctcatggggagtat
gagcagcagctgacagcagaccctgtacaccatgcatccgtgcacaaaatcttggaagat
cagcccagcgaggatgaagccattgcttcagcagcagagcagaacccagaggatcacaca
gcagcaatcccatcacatgagctccccgctgcagcacagcctgcactggcccggcaggag
ccctcagcagagctcagctacagcgatctcacttcgctgctgagcaccccagaaggtgat
gcacagcctgtggaggctcccagcagcggtgcagaagaggcctggccagcagaacacagc
agcgcggatgacagccctgcaccactgccgaaagccgaccttgcacaactggcgtttggg
caagcagggcctagcaaagtaggaggtgaggctgctgaagactcaggggcagggcggcag
ccgccattgcctcagccaaatccccctccagagccacacggcggggaggcccagccagcg
gagggaaccaggggaggagcctccagtgcaagcactgcagcggacaaaccctctctgcaa
cctgagcaggacgtgtctccgcctcacagccagccagaggacactcagaaaccagcagag
gtggcgcactcagaaccgctgcaagacccggcccacctcacaccacacaccggtgtgagg
ggcgttgctggcgcagccggcacggcagagcagacgccagggaggcagcccaccgagcag
cagcaggcggagataagggaatttctggcgagccaggggctgcacaacattctggacggc
cagcagatggacatgccggagttgcaaggggaggacatcgcagaccagctgtcccctcgc
gagcatggctcccagacagacgccaaccttctggaggacatgaatgagatcctgatgctg
gacttgggcgggctgggcggcttccgctcgccgctggggtctccgccgcgcgccggcagc
tcgcacttttccttcgacgacccccaccaccccccgcggccccctgaccttgaacccctc
ccgccctcctggcgcatcgccgaggcgcgtcccaccaaagctccctttgttctgttcatg
caaatcgcgcgggtggtgggggcggcgacagtggcggagggaacggcggagtacacgcgg
tacagcgtggaggtgacgccgtcggatgagggcgaggcgtggacggtgcaccaccgcttc
aaggacttcattgcgctgcggtccgcgctgacagcgctcgtgggccccaacagcctgccc
cagtgctgggccgacgtcagcaaagcccgctccgtcaccggccgccaccggttagcgcca
gaggtggtggcggcgcggcaggcaatgctggacaggtgcctggtgtcggttgtggcggct
gggccgccgctgagcgaggcgccgccgctgctggcgttcctggccccggcagacccccac
tgggaccccccctcgcagccgccggggacgcttgcgcgcgccttgccggggcgcggccag
gacgccggtgcagctgccgcgcagctggcaagggccggcagcgagcacgcatcctctgct
tcctcttcggcggaggccggcaataggtatggcagcctggtgcggctgctgacggaggag
ccgcagaagctggcggaagccgacctcatccgcatgcagcgcggccagtgcgccgcctgc
cgcgcgccgctgccgccgcccgtgaagcagtccagcttccttgggggccgctccgccgca
acggggccgcggcggtgcgagtacaatgcgcggctgtactgccacgagtgccacaggggg
gacctcgcggagctgccagcgctggtgctccaccactgggacttccacccgcgcccggtc
tcgaccatggccgccgactacctcgcctccatcgccgaccggcccctgctctgcatcggc
gctgtcaaccccgggctgtatgcccgtgtgccgatgctggcgcgcgcacaagacctacgc
acgagggcctgcaaggcgctggccgctgcacgcgcgtcggggcccgagggtgcagacaag
gcgaagcggctgttggcgggggcggggccgcggcggtacctgctcgagtcgccggacttc
tgggccatgcgcgagctggtggagctgagcaagggcgccttctcgcgcctgccagcctgg
ctcgaggccgccgccgcgcgcgccgccagcctcgccacctccgccctgctcatcgcagcc
gccgagcagcagcagcgccccggccggcactga
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