Coccomyxa subellipsoidea: COCSUDRAFT_56024
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Entry
COCSUDRAFT_56024 CDS
T02914
Name
(RefSeq) Piwi-domain-containing protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_56024
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_56024
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
COCSUDRAFT_56024
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
COCSUDRAFT_56024
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
COCSUDRAFT_56024
microRNA pathway
RISC loading complex
COCSUDRAFT_56024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
DUF4446
DUF3671
Motif
Other DBs
NCBI-GeneID:
17040317
NCBI-ProteinID:
XP_005646875
JGI:
56024
UniProt:
I0YVB2
LinkDB
All DBs
AA seq
1008 aa
AA seq
DB search
MAKVEAAAAVAITAAAAAAVAIIAAAAAAVATIAAAAAAIFAAAAMVAISVVAAAAGAAE
VRGRGRGDFDDRPPPRFGPDREAQLGSAARPGEMVPLQGRHASAQNAERAFTEFPKALQA
FHYDVSIASVNRSEADSKTRSVSTVETGDISELPGPPLGPPPRPPPNLPAKAPAKPMTAE
LSRRVIAALAEQEDWPKVWAFDGRKSIYAAKLFLPQHENIFEVKATDGESDRPRRFKVTI
KWAQTINIRTLHDFVSGGEGEEIPQDAVQALDIALKHSVSYRDDVKTFARAIFWHDPTKV
KPLGNGAEACTIPTKAVWLGYQQSLRPSQGGLTLNVDLAATAFLQPQPVIDFLMRATGLR
SPRDFNRLTPQQHRTASKAITGLKVEVRLGGTFNRKYRAKGLMPKGPADLTFHNEADGKE
MTVAQYYEEHYHISVKNPEVPCINVGTPTKPVWLPPEVCWIASGQRRLKLDERQTAEMIK
TSAQRPQERKEYLQRCLRNFADLPHDPIVQAFGMDVDPNLLKVIGRQLPPPELQYNNRNV
TPEPDRGSWDMRGTGFFKPGTITSFAIAAFCSQRNAAGPPDDPVSLQNFMWDLVRGCTKL
GIQVPRMTPVPDSLIVWHNPNSNFPGETMVAAFEAAKGFFKRDPDIIFVVLPERNQTEVY
KAIKRASDSFLGVPSQCFNPQKGGICTPPRRGRDQYVANVAMKINAKLGGINVNLISRPV
KWMEEPFMVLGVDVSHPVGFNKSSPSVAAVVGSLDNSLSSFGTEIVLQGHRVEVILIIII
IIIIIIIIIIIIIIIIIIIINLKQAVRTLLLLYEKTTGANPRRIIAYRDGVSEGQYPQVQ
RLEIPQIVEAICEQRKCDVRDCDIPITYVVVSKGHHTRLFPASPRDGTVVDRAIVHPKEY
DFYLNAHASIQGTSRPVHYHVLLDQNNLGPDQLQSFTYDMCYLFCRCTRSVSIVPPCYYA
HLAAFRGRILVSEGMSDTETSVSSGSTGPTNVECAKAHANLRCKMYYV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggtggaggcggcggcggcggtggcaattaccgcggcggcggcggcggcggtg
gcaattatcgcggcggcggcggcggcggtggcaactatcgcggcggcggcggcggcgatt
ttcgcggcggcggctatggtggcaatttccgtggtggcggccgcggcgggggccgcggag
gtccgcggccgcgggcgtggagatttcgacgatcgtcccccaccaaggtttggcccggac
agagaggcgcagctgggctccgctgccaggccgggcgagatggtccccctgcaggggcgg
catgcgagtgctcaaaacgccgagcgggctttcactgaattccccaaagccctccaggct
ttccactacgacgtttccatcgcctctgtaaaccgatctgaggcagacagcaagacaaga
tctgtgtcaacagtggagactggagacatctctgaactccccggcccccctctcggcccc
cctccccgtcccccgcccaacctccctgccaaggccccagccaaacccatgacagctgag
ctgtcaaggcgagtgatagcagcgcttgccgagcaagaggactggcccaaggtgtgggct
tttgacgggcgcaaaagcatctatgctgccaagctgttcctcccgcagcatgagaacatc
tttgaggtcaaggcaacagatggtgagtctgaccgcccacgacgcttcaaagtgaccatc
aagtgggcgcagaccatcaacatcaggaccctccatgactttgtcagtggaggggaaggc
gaggagataccccaggacgctgtgcaggccctggacatcgctttgaagcactctgtgagc
taccgcgacgatgtcaagacctttgcgcgtgccatcttctggcacgaccccaccaaagtc
aagcctctgggcaacggcgccgaggcatgcaccattcccaccaaagctgtgtggttgggc
taccagcagtcgctgcgcccctctcagggcggcctgacacttaatgtcgacttggcagcg
accgccttcctgcagccccagcctgtcatcgacttcctgatgagggcaacaggcctgcgc
agccccagggactttaatcgattgactccccagcagcaccgcaccgccagcaaggccatc
acaggactcaaggttgaagtgcgcttgggtggcactttcaatcgcaagtaccgcgccaaa
gggctgatgccaaaggggccggcagatctgacattccacaatgaggcggatggcaaggag
atgacagtggcacagtattacgaagagcattatcacatcagcgtcaagaaccctgaggtc
ccctgcatcaacgtggggacacccaccaagccggtgtggctgccaccagaggtctgctgg
attgcttcaggccagaggcgcctcaagctggatgagcgccagactgcagagatgatcaag
acatctgcgcagaggccccaggagcgcaaggagtacctacagagatgcctcaggaacttt
gcagatctgccgcatgatcctattgtccaggcgtttggcatggatgtggacccaaacctg
ctcaaggtgattgggcgccagttgcccccgccagagctgcagtacaacaaccgcaatgtg
acgcccgagcctgaccgcggctcctgggacatgcgcggcaccggcttcttcaagcctggc
accatcacctcattcgccattgccgccttctgcagccagcgcaacgctgcagggccccct
gatgaccctgtctcactccagaatttcatgtgggatctggtgaggggctgcaccaagctg
ggcatacaggtgcccaggatgacccctgtgccagactccctcattgtctggcacaacccc
aactccaacttccctggggagacaatggtggccgcatttgaggctgcaaagggtttcttc
aagagggacccagacatcatatttgtcgtcctgccagaaaggaatcagacggaggtgtac
aaggcaatcaaaagagcgtctgactctttcctgggggtcccaagccagtgcttcaatccg
cagaagggtggcatctgcacgcctccgaggcgcggccgcgaccagtacgtcgcaaatgtg
gccatgaagatcaacgcaaagctgggcggcatcaatgtcaatctgatctcaaggcctgtc
aagtggatggaggagcccttcatggtgctgggcgtggatgtttcacaccctgtgggcttc
aacaagagcagcccctctgttgcggcagttgttggctcgctggacaactctctgtcttct
tttggcacagagatcgtgcttcaggggcaccgcgtcgaggtcatcctgattattattatt
attattattattattattattattattattattattattattattattattattattatt
aacctgaagcaagcggtgaggactctgctgctgctctacgagaagacgaccggtgccaat
ccaaggcgcatcattgcgtacagggatggcgtgtcagagggccagtacccccaggtgcag
cgcttggagatccctcagattgtggaggcgatctgcgagcagagaaaatgcgatgtcaga
gactgtgacatccccatcacctacgtggtagtctccaagggccaccacacccgcctcttc
cctgcgagtcccagggacgggactgttgtggacagggcgatcgtgcaccccaaggagtat
gacttctacctgaatgcgcacgcctccatccagggcaccagccgccccgtgcactaccac
gtcctgctggaccagaacaacctcggcccagaccagctgcagagcttcacctatgacatg
tgctacctattctgccgctgcacgcgctctgtgtcgatcgtgccaccctgctactacgcc
cacctggctgccttccgcggccgcatccttgtcagcgagggcatgtcagacacggagacc
tctgtctcttcgggctccaccggacccacaaacgttgagtgtgcaaaagcgcacgccaac
ctccgctgcaagatgtactacgtttga
DBGET
integrated database retrieval system
