Coccomyxa subellipsoidea: COCSUDRAFT_61427
Help
Entry
COCSUDRAFT_61427 CDS
T02914
Name
(RefSeq) hypothetical protein
Organism
csl
Coccomyxa subellipsoidea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1A
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
17043187
NCBI-ProteinID:
XP_005649729
JGI:
61427
UniProt:
I0Z3G6
LinkDB
All DBs
AA seq
1431 aa
AA seq
DB search
MSAAHKPEEQEDQRKRKRAHASKEQLEEFFAGNANPSAAEKASLAEQSDLTVQQVSTWFG
NRRKKARLAQAAQADGAAGPAAAQAPEPIIIDDEDADMAAEDMVESSEHAARTAVAEPAA
CMPEQQAGPPATPAAVCSVHREEQIKQLKEEIAELESYVTSRPHPIVTLDFAKFEFILQK
SQVGIWLVGCSLPLSEATEKLWYHCKGDYNPGSPLTKAAIRNMIIEVAARKSYAAKDAGS
DKVDALEDTTASFLWQWEVRDQKYLPVAHRNEGIQHKKQMRKVAARLTALAAACKALEGK
GTDKQVAKALAKLDKLEKPLLSPAAAAADSAAENPSASQPAPAGGEGTPGADASSVPAAD
KEADEAEKAKPAQEKQEADAQKELARLEKQKAAEEKERARIEAAREKERQRLEKEAQKKE
KEAEKERQRAAKEAEKERQRAEKEAAKTGFESRDALCKSRNLMNRFFKTPAKTGGEAEGG
SSQPLKTPMSALPLRHPFHEIFTPAPESARLPVPEDISAAFDEAIAAAKQRGVSELEEGM
QHIRQSWKSRPRHKRIRGPPSEKREIIIIIIIITTTTIIIIIIIVIIIIMTIIIIIIIII
IIIIIIIIIIIIIIIIIIIIIIIVLMKIIIIVIIIMIEEFGRLEKARLWRRKFLWFAASK
RPAYYGSWSAASPTVTGRRPLARDDALDYEVMSDEEWEEEPEGENLSDDDMEEEEDEAED
SCGDGFVVPNGYISDDEGVASVQQDLDDLAAELDDEATGAEVAAGGDAVQRDRLRLLNAA
LDRATRANRPIIITRLPMPPAPSQDSARPAHLTGDPALLSALQPLVLTTKVKIRMLPPPE
TEDAPGDVAADGAAGPATARGRGRAAAQEQEELTPDLVQFLLSHPELKAVAKVAKAFTEA
HPDRKVVKKWVHNKVKDIAEHSGGAWVIKQSSASAQQPADAEQSPASTPLQPRPSSADQP
PLASHPAGEAATSAAVTPATAGPLDRFLRAGSQPQATPQPQRAAAAAAVQGLGEVVILDE
DEGAPAPMDVDAPPAAAAAQTPSTKDEIRGTADPFWRGLAESIAANSLQVAEQLQRGFKA
SAAGELVRAVPSFVLTAMVKGLASGQCSRLLQSCLLKALAQLLRLLVAAGDTSNRVPTPT
KVFRDERSAPVAVSLDEMLACRSLLGALQACMRAKQNRMPQVAQPAAQLLAAMLAVGAAE
LGTPAAGSQESQQPSLAAAAIKEAAELRLHVARDDAWHVLFTELLGPTSDASVVECVAKT
LGTIGRDAAAARTLLQRYSDIFSDKELHGKLQKLLLAASAVATKHRQKRAMEDCLSFLGD
LLSLQEADGPVRNATAVTSFGALLRSLEETVSAHIPSEPADPPAGNTRCLLAALKVGAFA
ARFATTHKQCLSAMQRSLPGPIAAHESVWEKLQVADIAQALLAQLSTAPPQ
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcgcacaagccagaagagcaggaggatcagcggaagaggaagagagcacat
gcaagcaaggagcagctggaggagtttttcgctggcaacgcaaatcccagcgctgccgag
aaggccagcttggcagagcagtccgacctgaccgtccagcaggtgtccacatggtttgga
aacaggcgcaagaaggctcgcttggcccaagcagcgcaagcggacggtgccgcagggcca
gctgccgctcaggcgcctgagccaatcatcatagatgacgaggacgcagatatggccgct
gaggatatggtggagagttcagagcatgctgccaggaccgccgtggcagagccagctgca
tgcatgccagagcagcaggcagggccgcctgcaactccagcagcagtgtgtagcgtgcac
agagaagagcagatcaagcagctgaaagaggagatcgcagaactggagagctatgtcacc
tcacggccccatcccatcgtcaccttggactttgcgaaatttgagtttatcctgcagaaa
agccaggtggggatctggttggtgggctgcagtctgccactgtcagaggccaccgagaag
ctctggtaccactgcaaaggcgactacaaccccgggtcacccctcacaaaggcggccatc
cgcaacatgatcatcgaggtcgccgcgcgaaagagctatgctgccaaagacgctggcagt
gacaaagtggatgcgctggaggacacaacagccagtttcctgtggcagtgggaggtgcgg
gaccagaagtacctgcctgtggcccaccgcaatgagggcatccagcacaagaagcagatg
cgaaaggtggcggctcgcctgacggcgctggccgcagcgtgcaaagcgctggagggcaag
ggcacagacaagcaggtggcgaaggcgctggctaagctcgacaagcttgagaagcccctg
ctgagcccagctgcagccgccgcagactcagctgcggagaacccgagcgcctcgcagccg
gcccccgctggtggggaagggactcccggagcggatgcgagcagtgtgccagcggctgac
aaggaggcggacgaggcagagaaggccaagcctgcccaggagaagcaggaggcggatgcc
cagaaggagcttgctcggctagagaagcagaaggctgctgaggagaaggagagggcgcgc
attgaggcagccagggagaaggagcgccagcgcctggagaaagaggcgcagaaaaaggag
aaggaggccgagaaggagaggcagagagctgcaaaggaggcggaaaaagagcggcaacgg
gctgagaaggaggctgcaaagacaggattcgagtcgcgtgacgccctgtgcaaatcccgc
aatctcatgaacaggttcttcaagacgccagcgaagactggcggtgaagccgagggcggc
agcagccagccgctcaagactcccatgtccgcgctgccgctgcgacaccccttccatgaa
atctttacccccgcccccgaaagcgcacggctgcccgtgcccgaggacataagcgcagca
tttgatgaggcaattgcggcggccaagcagcgtggtgtgtctgagctggaggagggcatg
cagcacatcaggcaatcttggaagtcccggccgcggcataagcgcatccgaggtccgccc
tctgaaaagcgtgaaataataataataataataataataacaacaacaacaataataata
ataataataatagtaataataataataatgacaataataataataataataataataata
ataataataataataataataataataataataataataataataataataataataata
ataataatagtactaatgaaaataataataatagtaataataataatgattgaagagttt
gggcggctggagaaggcgcggctgtggcgccgcaaatttctgtggttcgccgcctccaag
cgcccggcctactacgggtcgtggtccgccgccagcccaacagtgacggggcggcgcccg
ttggcgagggacgatgcgctggactatgaggtcatgagcgacgaggagtgggaggaggag
cccgagggagagaacctgtcggacgatgacatggaggaggaagaagacgaggcggaggat
tcgtgcggggacggatttgtggtgcccaacggctacatctcggacgacgagggcgtcgca
tccgtgcagcaggacctcgacgatctcgccgccgagctcgacgacgaggcgacgggtgcg
gaggtggcggccggcggcgacgcagtgcagcgcgaccggctgcggctgctgaatgcggcg
ctggaccgggcgacgcgcgcgaatcggcccatcatcatcacgcgcctgccgatgccgccc
gcgccgtcccaggactccgcgcggcccgcccacctcaccggcgaccccgccctcctctcc
gccctccagcctctggtcctgacgaccaaggtcaagatccggatgctgccgccaccagag
accgaggacgctcccggggatgtcgccgcggacggcgccgcggggccggcaacagcgcgc
ggccgcggccgggcggccgcgcaggaacaggaggagctgacgccagacttggtgcagttc
ctgctctcgcaccccgagctcaaggcggtggccaaggtcgcaaaggcgttcactgaggcg
cacccggatcgcaaggtggtgaagaagtgggtacacaacaaggtgaaggacatcgcggag
cactccggaggcgcctgggtcatcaaacagagctctgccagtgcccagcagccagccgat
gccgaacagtctccagcatccacaccattgcagccgcgcccatcctctgcagaccagccg
ccgctcgcatcacacccggctggcgaagctgcgacttcagcggcggtgacccccgccact
gccggccctctggaccgtttcctgcgcgccgggtcacagccgcaggccacgccgcagccg
cagcgcgcggctgctgccgccgctgtgcagggactcggggaagtggtaattttggatgag
gacgaaggcgctcctgcccctatggacgtggacgcaccaccagctgccgccgctgcgcag
acgcccagcaccaaagacgagatacgggggacggcggatccgttctggagggggctggcg
gagagcatcgcggcaaacagcctgcaggtggcggagcagctgcaaagggggtttaaggcg
agcgcggcaggggagttggtgcgcgcggtgccgagctttgtgctcacggcgatggtgaag
ggcttggcgagcgggcagtgctcgcggctgctgcagtcctgcctgctcaaggcgctggcg
cagctgctgcgcctgcttgtggcggccggggacacttccaaccgcgtccccacccctacc
aaggtgtttagggacgagcggtctgccccggtggcggtgtctctggatgagatgctggcc
tgccgcagcctgctgggcgcgctgcaggcatgcatgcgcgccaaacagaaccgcatgccg
caagtcgcgcagcccgccgcccagctgctcgcggcgatgctagcggtgggtgctgctgag
ctgggcaccccggcggccgggtcacaggaatcccagcagccatctctggcagcagcggcg
atcaaagaagccgcagagctgcgcttgcatgtggcccgggacgacgcctggcatgtcctc
ttcacagaactgctggggcccacaagcgatgcctctgtggtggaatgcgtcgcgaagact
ctcggcacgatcggccgtgatgcagcagctgcacgcacactgctgcagcggtactcggac
atcttcagcgacaaggaattgcatgggaagctgcagaagctgctgctcgccgcctccgcg
gtcgccaccaagcatcggcagaagcgggccatggaggactgcctgagcttcctgggtgac
ctgctgtcactccaagaggcagacgggccggtgagaaatgcgacagccgtcacgagcttt
ggcgccctgctacgatcgctggaagagactgtcagcgcccacattccaagcgagccggct
gaccctccagctgggaacacccgatgcctccttgccgccctgaaggtgggggcatttgca
gcgaggttcgcaacaacccacaagcaatgcctgagcgccatgcaaaggtcgctgcccgga
ccaattgcagcgcatgagagtgtatgggagaagctccaggtggcagacatagcgcaggca
ctgctggcacagctcagcactgccccgccacaatag
DBGET
integrated database retrieval system
