Coccomyxa subellipsoidea: COCSUDRAFT_68047
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Entry
COCSUDRAFT_68047 CDS
T02914
Name
(RefSeq) WD40 repeat-like protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
csl
Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_68047
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
COCSUDRAFT_68047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
WDR54
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
17036793
NCBI-ProteinID:
XP_005643387
JGI:
68047
UniProt:
I0YKC4
LinkDB
All DBs
AA seq
459 aa
AA seq
DB search
MVIEEPGKSPALTECAFVDDDQVLLRSYAVEPIVALAASLDGTHCAGGGQSGTVYLWEVP
SGRLLRSWPAHYKAVTALAFTDDGTVLLSAGEDTVACAWLLMDVLDDSPEQGSGMHGPPT
FQSWSEHTLPITSLYCGMGANPIVVTASLDRSCKIWSLSQGALLRSVSFPVSLHSVAADP
AEHALYLGGADGRIFEVSLAGPRPAPDPTAFLGIPGTGTNLVAGSGAISGSEAGEGSVME
GHARCVTCFACTTDGGHMLSGSEDGTVRVWELRSRQAVRVIASPDKAPVTGLLVLDRPPS
LASGQGRHGAASSSDSGFQAKGPKRPQPLAPFCKFMGMAGALQPWEGPPLLLDGSHGYRG
DILRVCPLERGTAEDPARESFGDIPHRSMASPGATVFLGSVEQAAVGDEGGEVDFRAETE
EVKEQLKQALETAQKWQGLHAQLHQFCVEQVLPAASTPG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgaggagcccgggaagtccccggccctcaccgagtgtgccttcgtggacgac
gaccaggtcctgctgcgcagctatgcagtggagcccatagtggcgctggctgcctcgctg
gacgggacacactgcgccggtggcggccagtctggcacagtgtacctgtgggaagtcccc
tctggccgcctgctgcgctcatggcctgcccactacaaggcggtgacggcgctggcgttc
accgatgacggtacagtgctgctgagcgctggggaggacacagtggcgtgcgcgtggctg
ctcatggacgtgctggatgactcaccagagcagggctccggcatgcacgggccgcccacc
ttccagtcctggtcggagcacacgctgcccatcactagcctctactgcggcatgggcgcc
aacccgatcgtggtgactgcctccctggaccgcagctgcaagatctggagcctctcacaa
ggagcgctgctgcgctccgtttcatttccggtctccctacacagcgtggcggccgacccg
gcggagcacgcgctctatctcggtggcgcggacggccgcatctttgaggtttccctggcc
ggcccgcggccggcgccggatccgacggcgttccttggcatacctggcaccggcaccaat
ttagtcgcaggctctggcgccatttcaggcagtgaggctggggaggggagtgtcatggag
gggcatgcgcgatgcgtcacctgcttcgcgtgcacgacggacggcgggcacatgctgtca
gggtcggaagatggaacagtgagggtgtgggagctgcgcagccggcaggcggtgagagtg
atagccagccctgacaaggcgccagtcaccgggctgctggtgctggacagaccccccagc
ctggcctctggacagggccgacacggcgctgcatcctcctcagactctggctttcaggca
aaggggcccaagcggccgcagccgttggcgccgttttgcaagttcatggggatggcggga
gcgctgcagccctgggaggggcctccactgctcctagacggcagccatggctacaggggt
gacatcctgagagtgtgtcctctggagcgaggcacggcagaggacccagcaagggaatcc
tttggagacattccacatcgtagcatggcatctcctggcgcaacagtatttttggggtct
gtggagcaagcagcagtgggagatgaggggggtgaagttgattttcgagcagaaactgag
gaggtgaaagagcagctgaagcaagctctggaaacagcgcagaagtggcaggggctgcat
gcgcagctgcaccagttctgtgttgaacaggtgctgcctgcggccagcacgccgggctga
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integrated database retrieval system