KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_68047
Entry
COCSUDRAFT_68047  CDS       T02914                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
csl  Coccomyxa subellipsoidea
Brite
KEGG Orthology (KO) [BR:csl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csl03009]
    COCSUDRAFT_68047
Ribosome biogenesis [BR:csl03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    COCSUDRAFT_68047
SSDB
Motif
Pfam: WD40 NBCH_WD40 WDR54 ANAPC4_WD40
Other DBs
NCBI-GeneID: 17036793
NCBI-ProteinID: XP_005643387
JGI: 68047
UniProt: I0YKC4
LinkDB
AA seq 459 aa
MVIEEPGKSPALTECAFVDDDQVLLRSYAVEPIVALAASLDGTHCAGGGQSGTVYLWEVP
SGRLLRSWPAHYKAVTALAFTDDGTVLLSAGEDTVACAWLLMDVLDDSPEQGSGMHGPPT
FQSWSEHTLPITSLYCGMGANPIVVTASLDRSCKIWSLSQGALLRSVSFPVSLHSVAADP
AEHALYLGGADGRIFEVSLAGPRPAPDPTAFLGIPGTGTNLVAGSGAISGSEAGEGSVME
GHARCVTCFACTTDGGHMLSGSEDGTVRVWELRSRQAVRVIASPDKAPVTGLLVLDRPPS
LASGQGRHGAASSSDSGFQAKGPKRPQPLAPFCKFMGMAGALQPWEGPPLLLDGSHGYRG
DILRVCPLERGTAEDPARESFGDIPHRSMASPGATVFLGSVEQAAVGDEGGEVDFRAETE
EVKEQLKQALETAQKWQGLHAQLHQFCVEQVLPAASTPG
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggtcatcgaggagcccgggaagtccccggccctcaccgagtgtgccttcgtggacgac
gaccaggtcctgctgcgcagctatgcagtggagcccatagtggcgctggctgcctcgctg
gacgggacacactgcgccggtggcggccagtctggcacagtgtacctgtgggaagtcccc
tctggccgcctgctgcgctcatggcctgcccactacaaggcggtgacggcgctggcgttc
accgatgacggtacagtgctgctgagcgctggggaggacacagtggcgtgcgcgtggctg
ctcatggacgtgctggatgactcaccagagcagggctccggcatgcacgggccgcccacc
ttccagtcctggtcggagcacacgctgcccatcactagcctctactgcggcatgggcgcc
aacccgatcgtggtgactgcctccctggaccgcagctgcaagatctggagcctctcacaa
ggagcgctgctgcgctccgtttcatttccggtctccctacacagcgtggcggccgacccg
gcggagcacgcgctctatctcggtggcgcggacggccgcatctttgaggtttccctggcc
ggcccgcggccggcgccggatccgacggcgttccttggcatacctggcaccggcaccaat
ttagtcgcaggctctggcgccatttcaggcagtgaggctggggaggggagtgtcatggag
gggcatgcgcgatgcgtcacctgcttcgcgtgcacgacggacggcgggcacatgctgtca
gggtcggaagatggaacagtgagggtgtgggagctgcgcagccggcaggcggtgagagtg
atagccagccctgacaaggcgccagtcaccgggctgctggtgctggacagaccccccagc
ctggcctctggacagggccgacacggcgctgcatcctcctcagactctggctttcaggca
aaggggcccaagcggccgcagccgttggcgccgttttgcaagttcatggggatggcggga
gcgctgcagccctgggaggggcctccactgctcctagacggcagccatggctacaggggt
gacatcctgagagtgtgtcctctggagcgaggcacggcagaggacccagcaagggaatcc
tttggagacattccacatcgtagcatggcatctcctggcgcaacagtatttttggggtct
gtggagcaagcagcagtgggagatgaggggggtgaagttgattttcgagcagaaactgag
gaggtgaaagagcagctgaagcaagctctggaaacagcgcagaagtggcaggggctgcat
gcgcagctgcaccagttctgtgttgaacaggtgctgcctgcggccagcacgccgggctga

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