KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_68202
Entry
COCSUDRAFT_68202  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K03267  peptide chain release factor subunit 3
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    COCSUDRAFT_68202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csl03019]
    COCSUDRAFT_68202
   03012 Translation factors [BR:csl03012]
    COCSUDRAFT_68202
Messenger RNA biogenesis [BR:csl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     COCSUDRAFT_68202
Translation factors [BR:csl03012]
 Eukaryotic type
  Release factors
   COCSUDRAFT_68202
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 G-alpha CDC27 Cwf_Cwc_15
Other DBs
NCBI-GeneID: 17036723
NCBI-ProteinID: XP_005643338
JGI: 68202
UniProt: I0YK75
LinkDB
AA seq 630 aa
MSWEENEDFLPSENQAPASRNAAPALNPNAFSFNPGASTFSPTFAAALAAPSPVLQAPAP
ASVRPAAASFQHQPADAPQTAPPAASHAITNGVAPMDEDVPADGAGRSTREEMEVESAAE
VDSAAEAVKNLAVSPSRPAPASSEASPNKGRAVDHDEDDEQEEDQEARNKELQRIHEELQ
KADNREHMNIVFIGHVDAGKSTTGGQILYLTGGVDERTIQKYEKEAKDKNRESWYMAYIM
DTNEEERAKGKTVEVGRALFMTKKKRYTILDAPGHKNYVPNMISGASQADVGVLVVSARK
AEFEAGFERGGQTREHAQLAKTLGVAKLIVTINKMDDPSIITPDGKWSEERYKEIVTKLG
GFLKTCGYREKDVIYLPMSGLLGLNIKDPVPEKTCPWYKGRTLFQVLDDVEPLPRDPLAP
FRMSVIDRYKDMGTIAMGKSEAGLVRKGDRLYVMPNKAPVTVTTIYRDDDEVQAALGGEN
LRLRLSGVDEDDIAPGFVICSRNAPVPCVTYFDAQLQILDLLEHKAVFTSGYKAILHLHS
LVEECEITTLFHQIDMKIKDPKLNKKKVKFAKSGSAVVVRIEVEKPISAELFKNVPQLGR
FTLRDEGRTIAIGKIIKLPKSLKETAAEAK
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgagttgggaagagaacgaggatttcctgccttcggaaaaccaggcccctgcatcacgc
aatgctgctcctgcactgaatcccaacgcattcagcttcaatcctggcgcgtcaacattc
agtcccacctttgctgcagctttagcagcgccgtccccagtccttcaggctcccgctcca
gcctcagtgcgtcctgcagctgcctcctttcagcatcagcctgctgacgccccacagacg
gcgcctcctgcagcttcgcacgccataacaaatggtgtggcgcccatggacgaggacgtt
ccggcagatggagcaggcaggagtacaagggaagagatggaggtggagagtgctgcagag
gttgacagcgcggctgaagctgtgaagaatttggcagtatctccatcacggccagcgcct
gctagctcagaggcctctcccaacaaagggagagccgtggatcatgacgaggacgatgaa
caggaagaggatcaggaggcgcgcaacaaagagctgcagcggatacacgaggagctgcag
aaggccgacaacagggaacacatgaacatcgtgttcattgggcatgtagacgcgggaaaa
tccacaactggagggcagattctctatctcacgggaggagtggatgagcggacgatccag
aagtatgagaaggaggcaaaggacaagaacagggagagttggtacatggcatatatcatg
gacaccaacgaggaggagagggcaaagggaaagacagtggaggtcggccgtgcactcttc
atgacgaagaagaagcgctacaccatcctcgatgcgcctggacacaagaactacgtgccc
aacatgatatctggcgcatcccaggcggatgtgggtgtgctcgtggtctctgcaaggaag
gcagagtttgaggcaggctttgagcgtggtgggcagaccagggagcatgcgcagcttgca
aagacgctcggagttgcaaagctgattgtcacgatcaacaagatggatgacccttccatc
atcacccctgatggcaagtggtctgaggagcgatacaaggagattgtgacaaaacttggg
ggctttctcaagacttgcgggtacagggagaaggatgtaatatacctccccatgtctggc
ctgctggggctcaacatcaaggacccagtgccagagaagacgtgtccatggtacaagggc
cgcaccctgttccaagtcctggatgatgtggagccgctgccgcgcgaccccctggcgcct
ttcaggatgtcggtgatcgacaggtacaaggacatgggcaccatcgccatgggcaagagc
gaggccggcctcgtgcgcaaaggagaccgcctctatgtcatgccgaacaaggcgccagtg
acggtgaccaccatctaccgcgatgacgatgaggtgcaggcagcgctggggggcgagaac
ctgcgcctgcgcctgagcggtgttgacgaagatgacatcgctcccggctttgtgatctgc
tctcgcaatgcccccgtcccctgcgtcacctactttgacgcgcagctgcagatcctggat
ttgctagagcacaaggcggtcttcacatcaggctacaaggccatcctccatctgcactct
ctggtggaggagtgtgagatcaccactcttttccaccagattgacatgaagatcaaggac
cccaagttgaacaagaaaaaggtcaagtttgccaagagcggcagcgcagtggtggtgcgg
atcgaggtggagaagcctatttccgcggagctgttcaagaatgtgccgcagctgggccgc
ttcactttgcgagacgagggccgcacaattgccatcggcaagatcatcaaattgccgaaa
tccttgaaggagactgctgcagaggcaaagtga

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