Clostridium cf. saccharolyticum K10: CLS_04640
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Entry
CLS_04640 CDS
T02614
Name
(GenBank) alanine racemase
KO
K18348
serine/alanine racemase [EC:
5.1.1.18
5.1.1.1
]
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso01502
Vancomycin resistance
cso02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLS_04640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CLS_04640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
cso01504
]
CLS_04640
Enzymes [BR:
cso01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
CLS_04640
5.1.1.18 serine racemase
CLS_04640
Antimicrobial resistance genes [BR:
cso01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CLS_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Acyl_transf_3
Motif
Other DBs
NCBI-ProteinID:
CBK76286
LinkDB
All DBs
Position
complement(462070..464202)
Genome browser
AA seq
710 aa
AA seq
DB search
MEQKQRFGGLDRFKFIAAFLVVAIHTSPLSSFSANADFLLTRVLARTAVPFFLMVTGYFL
LPQYLFEKSMDRRPLLRFLKKTVLLYGIAILLYLPVNIYAGHFQGAGIGELIRKVLFDGT
FYHLWYLPAVLLGVPLVCWAGSRLPFRILGGSCLLLYLIGLFGDSYYGFIANSPIASFYD
VLFHVFSYTRNGLFYVPIFLVMGTKLKVIHWREKKVLLILGASGSLFLMVLEGLFLHKLG
VQRHDSMYFLLIPSMFFLFQLALAWDKPSAKTLRTMSMWIYLFHPFWIVAVRGFAKVIHL
ETILVDNSLIHYLAVCMLSVLSAVVLVRLLPAEKRRDSSPQARAWIELSKQQLYQNVDAL
SQLLPPGCQLMPAVKANAYGHGAVLIAKALQEKGIRAFCVASVTEGVELRKNGITGTILI
LGYTHPDSFPLLWKYRLTQTVVDYPYAQSLNACRKKVQVHLKIDTGMHRLGIRSDHIEEI
SRMFQMDNLLVDGIYTHLCVSDSMTAADREFTYQQANAFYTLLEKLSERGISCPNIHLSA
SYGLIHYPEFPSNYARIGIALYGMLSSRQDEENCSIPLFPVLSVKARVSSVRDLYKGEGA
GYGLRYVAKENRQIAVLSIGYADGIPRSLSNGHGRVLINGQFAPIIGNICMDQMLVDVTD
IKEVKQGDIAVLIGKSGDLEITAYDLAEQTESITNEILSRLGARLERILI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaagcaaagattcggcggactggacaggttcaagttcattgcggcttttttg
gttgtcgctatccatacttccccactatcttccttcagcgccaacgcggattttctcttg
acaagggtgcttgcaaggacagcagttccatttttcctaatggtaacgggctacttttta
ctcccccaatatctttttgaaaaatctatggaccgcaggccgcttctccgctttttgaaa
aaaactgttttgctgtatgggattgccatccttctttatctgcccgttaatatttacgca
ggccattttcaaggagcaggtattggggagctgatccgcaaggtcttatttgacggcact
ttttatcatctttggtatcttccggctgtcttattaggagtaccgctggtttgctgggcg
gggtcccggctgcctttccgcatattgggcggaagctgcctgctcttgtacctgattggc
ttatttggggatagttattacggcttcattgccaattcccccatagcgtccttttatgat
gttttattccatgttttttcctatactcggaatgggctgttttatgttcccatttttctt
gtaatgggaaccaaactaaaagtgattcattggagggagaaaaaggtccttttgattctc
ggtgccagcggttctctttttttgatggttttggagggactctttctgcataaattgggg
gttcagcggcatgacagtatgtattttttgctgattccttctatgtttttcctatttcag
ttggccttggcatgggacaagccttccgcaaaaacgcttcgtaccatgtcaatgtggatt
tatctttttcatccgttctggatcgttgcagtgcggggatttgcgaaagttattcacctt
gaaacaatactggtggataacagcctgatccactatctagccgtttgtatgctatctgtt
ttgtcagcggtagtattagtaaggctgcttcctgcggagaaaagaagggattccagccca
caagcacgcgcatggattgaactcagcaaacaacagctttaccagaacgtggatgcttta
agtcagcttcttcctcccggatgtcagttaatgccagcagtgaaagcgaatgcctatggg
cacggggctgttctaattgccaaagcgttgcaggagaaagggattcgggctttttgtgtg
gcttccgttacagaaggagttgaactgcgtaaaaatggaatcaccggaacaattctaatt
ttgggatatacacatcccgactcttttccgttgctttggaaataccggttgacgcagaca
gtagttgactatccatatgcccaaagtctgaatgcctgcaggaagaaagtccaggtacat
ctgaaaattgacacggggatgcaccgtttaggcatacgttccgatcatattgaggaaatc
agccggatgtttcagatggacaatctgctggttgacggtatttatacacacttatgtgtg
tcagacagtatgacggctgccgaccgagaatttacctatcagcaagccaacgccttctat
actttactggaaaaattaagtgaacgcggaatttcctgtccgaacatccatctatcggct
agttatggactcatccattatccagagttccccagtaactatgcaagaatagggattgcc
ttgtatgggatgttaagtagcaggcaggatgaagaaaactgttctatcccgctttttcca
gtgttgtctgtaaaagcaagggtcagttccgtcagggatttgtataaaggggaaggagct
ggatatgggctgcggtatgtggccaaagaaaatcgacaaattgcagtgctttccattgga
tacgcagacggtattccccggagcctttcaaacggtcatgggcgtgtactcatcaacgga
caatttgctcctattattggaaacatctgcatggatcagatgctggtagacgtgacagat
attaaagaggtcaagcaaggcgatattgctgttctcattggaaaatcaggtgacttggag
atcacggcctacgatttggcagaacagacagagagcatcacgaacgagatattgagcaga
ttaggcgctcgactagaacgcatattgatttaa
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