Clostridium cf. saccharolyticum K10: CLS_04660
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Entry
CLS_04660 CDS
T02614
Name
(GenBank) D-alanine--D-alanine ligase
KO
K18856
D-alanine---D-serine ligase [EC:
6.3.2.35
]
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso01502
Vancomycin resistance
cso02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLS_04660
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CLS_04660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
cso01504
]
CLS_04660
Enzymes [BR:
cso01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.35 D-alanine---D-serine ligase
CLS_04660
Antimicrobial resistance genes [BR:
cso01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CLS_04660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
GARS_A
Motif
Other DBs
NCBI-ProteinID:
CBK76288
LinkDB
All DBs
Position
complement(464954..466117)
Genome browser
AA seq
387 aa
AA seq
DB search
MNQFDNEVSSTLKEIAERVETPPYLKDRIDKELLRRCPEYRKKIAVIFGGCSPEYSVSLQ
SAYAVISHMDTEVYTPVLIGISQSGDWFLYEGDIEKIVSDTWCGGKDCTPVVVSPNRTSH
NLLLLENGKVKKLHIDAAFPVLHGRNGEDGTIQGLFEMAGIPVVGCGVLSSALCMDKDRA
HKLVHTAGIAVPSSFVLGKSASVATALQQAEKIGYPLFVKPVKAGSSFGITKVSSSNELP
AALELAFEYDKRVIVEECISGFEVGCAILGDEDLTVGEVDEIELSGGFFNFTEKYTLKTS
AIHVPARIPQNTAEQIKQAAKTIYRTLDCQGFARVDLFLTPSGEIVFNEVNTIPGFTTHS
RYPNMMKAAGFTFEQIVSALIEQAVRE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatttgataacgaagtaagcagcactttgaaagaaattgcggagcgcgttgaa
acaccgccatacttgaaagacagaattgataaagaacttttgcggcgctgcccagaatat
cggaagaaaattgccgttattttcggcggttgttccccggagtacagcgtatcgctgcaa
tccgcatatgcggtaatcagccatatggatactgaagtatatacccctgttctgatcggc
atttctcaatctggcgattggtttctgtatgagggagatattgaaaaaattgtttcggat
acatggtgtggcgggaaggattgtacgccggttgtggtatcaccgaaccgcacttcgcat
aatcttttgcttttggaaaacggcaaagtgaagaaactgcatatagatgcggcctttccg
gtgctgcacggcagaaacggcgaagatggaacgattcaggggctttttgaaatggcgggg
attcccgttgtgggatgtggcgtcttgtcctcggccttgtgtatggataaggatcgggcg
cacaagttagtacataccgctggaattgccgttccttcctcctttgtactggggaaaagt
gcttcggttgcgacagctttgcagcaagccgaaaaaattgggtatccgctatttgtaaaa
cctgtaaaggcgggttcttcttttggcattacaaaggtttcttcttctaatgagcttcca
gctgccttagagctggcctttgaatatgacaaacgggtaatcgtagaagaatgtatttct
ggttttgaagtgggctgcgccatattaggcgatgaggatttaaccgtaggtgaagtggat
gaaattgaactgtccggcggattctttaactttacagaaaaatacaccttaaagacctct
gcaatccatgttccagcaagaatcccgcagaataccgcagaacaaattaagcaagccgcc
aaaaccatttatcggacgctggactgccaaggatttgcgagggtcgatctgttcctgact
ccttccggtgaaattgtgtttaacgaagtcaataccattcccggatttaccactcatagc
cgctatccgaatatgatgaaagcagcgggttttacctttgagcagatcgtgtctgcgctg
atcgaacaggcggtgagagaatga
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