Cetobacterium somerae: MKD34_07975
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Entry
MKD34_07975 CDS
T08261
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
csom
Cetobacterium somerae
Pathway
csom00550
Peptidoglycan biosynthesis
csom01100
Metabolic pathways
csom01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
csom00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MKD34_07975 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MKD34_07975 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csom01011
]
MKD34_07975 (mrdA)
Enzymes [BR:
csom01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MKD34_07975 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
csom01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MKD34_07975 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Raf1_HTH
Motif
Other DBs
NCBI-ProteinID:
UPO97071
LinkDB
All DBs
Position
complement(1711794..1713584)
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AA seq
596 aa
AA seq
DB search
MKKDLGIKLGKSFEFRGEIYKVFIFLVFVLLGSRMAYLQILQKDKYNYLAQKNRVKLRKI
DAERGNIYDSNGELIVTNTLGYRLVYLNQRVVSNDQLKEMSEVTGYSEEYLQKRIKYGEI
VPYTKENILVEDLDLDLAHKLMEKIGDYPYLEVQSYSKRKYIYDSLAAHTIGYVKKITEK
EYESLKEDGYSPRDIVGKTGIEKIYDSQMKGKPGYDYIEVNALNKAQKIEKSKDPDPGYN
LHLSLDMRLQKYMEQVFQEENLSGALVAIEAQTGKVLTLVSYPTYSLTTFSSKISQEDWN
QITNDPRKPLTNKSISGEYPPGSVFKPFSAFAFFNNGLDPKTKIFDNGVYSIGKWSWRAW
KKGGHGTVDFEKSIVESVNPYYYKYADQFGHEPIIDVAGSFGYGKLSKIDVFGERAGILP
SEKWKKKRFKQGWFKGDTIILSIGQGYLLATPMQVAVSYMGLANRGKAYVPHVVDYMENG
NEKVEIKPEVLYETNYPSWYYDVLNKALINTVEKDNGTTKALRTPGLVIGAKSGSSQNSR
FDETHALVAGYFPADKQPKIVFTVLLEGAGGGGRVAGGVAKKFVDKYLEYYNEEMK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaagatcttggaataaagttagggaaaagtttcgaatttagaggggaaatatat
aaagtatttatttttttagtatttgtattattaggaagtagaatggcatacttacagatt
ttacaaaaagataaatataattatttagctcaaaaaaatagagttaaattaagaaaaatt
gatgcagaaagaggaaatatatacgattctaatggagaattaatagttactaatacatta
ggatacaggttagtatatttgaatcaaagagtagtaagtaatgaccaattaaaagagatg
agtgaagtaactggttacagtgaagaatatttacaaaagaggataaagtatggagaaata
gtaccatatactaaagaaaatattttagtggaagatttagatttagatctagctcacaaa
ttaatggaaaaaattggagattatccatatttagaagttcaaagttactctaaaagaaaa
tatatatacgactcattagcagcacatacaattggatatgtaaaaaaaataacagaaaaa
gagtatgaaagtttgaaggaggatggatattctccaagagatattgttggaaaaactgga
attgaaaaaatttacgattctcaaatgaaaggaaaaccaggatatgattatattgaggtt
aatgctttaaacaaagcacaaaaaattgagaaaagtaaagatccagacccaggatataat
ttacacttatctctagatatgagattgcaaaagtatatggaacaagtttttcaagaggag
aacttatcaggagctttagtagcaatagaagctcaaactggaaaagtgttaacattagta
agctacccaacatattcactgacaacatttagttctaaaatttctcaagaagattggaat
caaataacaaacgatccaagaaaacctttaacaaataaaagtatatctggagaataccca
cctggatctgtatttaaaccattttctgcatttgcattttttaataatgggctagatcca
aaaacaaaaatctttgataatggtgtttatagtattggaaaatggagttggagagcttgg
aaaaaaggtggacatggaacagttgattttgaaaaatctatagtggaatctgtaaatcca
tattattataaatatgctgatcaatttgggcatgaaccgattattgatgtggcaggaagt
tttgggtatggaaagttatctaaaatagatgtttttggtgagagagcaggaatattacca
agtgaaaaatggaaaaagaaaagatttaaacaaggttggtttaaaggagatacgataatt
ttatcaatagggcaaggatatcttttggctacacctatgcaagttgcagtatcatatatg
gggcttgcaaatagaggaaaagcttatgtgcctcatgttgtagattatatggaaaatggt
aatgaaaaagtagaaataaaaccggaggttttgtatgaaacaaattatccaagttggtat
tatgatgttttaaataaagcattaataaataccgttgaaaaggataatggaacaacaaaa
gcattaagaacccctggattggttataggagcaaaaagtggatcatctcaaaattcgaga
tttgatgagactcatgctcttgttgcaggatattttccagcagacaagcaacctaagatt
gtctttacagttctgttagaaggagctggaggaggaggtcgtgttgctggaggagttgct
aaaaaatttgtggacaaatatttggaatattacaatgaggagatgaaatga
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