Cytobacillus spongiae: LS684_15135
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Entry
LS684_15135 CDS
T09119
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cspg
Cytobacillus spongiae
Pathway
cspg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LS684_15135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspg03400
]
LS684_15135
Enzymes [BR:
cspg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LS684_15135
DNA repair and recombination proteins [BR:
cspg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LS684_15135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
AAA_16
nSTAND3
AAA_22
AAA_18
T2SSE
Cation_ATPase_N
AAA_28
NTPase_1
AAA
UvrD_C
DEAD
AAA_12
TsaE
DUF4926
AAA_17
Motif
Other DBs
NCBI-ProteinID:
UII54983
LinkDB
All DBs
Position
complement(2976412..2978844)
Genome browser
AA seq
810 aa
AA seq
DB search
MDIQDSLDLFAEQGKYMKGKHLVTIFRNDQNLYTVMRIRIEETNIDYEDKEAVVIGYFPQ
LHEQETYIFYGEEKEHPKFGTQFQATHFRKDIPQSKEGVISYLSSDLFKGIGKKTAENIV
ETLGENAISRILKEPSLLDQVPKLPPEKAKSLYDNLMEHQGLEQAMIALNQYGFGPQLSM
KIYQQYKENTIHILQSNPYQLVEDIEGIGFARADDLGYQIGISGSHPDRIKAACLYTLES
ESMQSGHVYVEAKSLLEQVKRLLEDNQRDSIDFQAISGEIVKLQEEGKIIIEERRLYLPS
LYFAEKGLVTNIHRLLKQTDYADQFPESEFLLSLGNLEERLNVQYAPTQKEAIQTALMSP
MLILTGGPGTGKTTVIKGIVELYADLHGCSLSPNDYKKEEPFPFLLTAPTGRAAKRMMES
TGLPAVTIHRLLGWNGSNGFDRHEENPLEGKILIVDESSMVDIWLANQLFKALPDQMQVI
LVGDEDQLPSVGPGQVLKDLLRSQSVPTVRLTDIYRQAEGSSIIELAHEIKKGTLPEDIS
TQKPDRSFIKCASTQIADVVKKVALNAKNKGYTAKDIQVLAPMYRGPAGIDKLNELLQEI
FNPNPDGTRKELVFGEVKYRIGDKVLQLVNQPENHVFNGDIGEIVSIFYAKENTEKQDMI
VASFDGIEATYTRQDLNQITHAYCCSVHKSQGSEFPIVILPVVKSYYRMLRRNLIYTAIT
RSQQFLILCGEEDAFKMGIQRGDDTARQTSLTERLKETIGFINEENSDFEEKKRSAEIQL
TEENYLNVDPLIGMENITPYDFLTEVPVNS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
ttggatattcaagattcacttgatttgtttgcagagcaagggaagtatatgaagggcaag
catctagtcacaattttccgcaatgaccaaaatctatataccgttatgcgaattcgaatt
gaagaaacaaatatagactatgaggacaaggaagctgtagtgatcggatactttcctcaa
ttacatgaacaggaaacgtatattttttatggagaagaaaaagaacaccctaagtttgga
actcaatttcaagcaactcacttccgtaaggatattcctcaatccaaggaaggggtaatt
agctatttatcgagtgacctgtttaaaggaattggaaaaaaaacagctgaaaatattgtc
gagacccttggagaaaatgcgatttcgcggattttgaaagagccttccctgctagatcaa
gtgccaaagctccctcctgaaaaagcaaaatccttgtacgataatttaatggaacatcaa
gggctcgagcaagcaatgattgctctaaaccaatatggttttggtccacaattatctatg
aaaatttatcaacagtataaagaaaataccatacatattcttcaatcaaacccatatcag
cttgtagaggatattgaagggattggctttgcaagggcggatgatttgggctatcagatt
ggaatcagtggcagtcatcctgatcgaattaaagctgcttgcttatatacacttgagtct
gaaagtatgcaatctggacacgtatatgtagaggcgaaaagtctccttgagcaagtaaag
cgattgttggaggataaccaaagggattcgattgattttcaagcgatatcgggagaaatc
gtaaagctgcaagaggaaggcaaaattatcatagaagaaagacgcctctatttaccttcg
ctttactttgctgaaaagggacttgtgacgaatattcataggctgttgaagcaaactgac
tacgcagatcagtttcctgaatccgagtttttgctctcactcggcaaccttgaggagagg
ttaaacgtccaatatgcacctacacagaaagaagccatacaaacagctctcatgtctccg
atgttaatattaacaggaggtccaggtacagggaaaacaacggtcattaaaggaatcgtg
gagctttacgctgatttgcatggctgttcattaagcccgaatgattataagaaggaagaa
ccgttcccctttttgttaactgcaccaactggaagagcagccaaacggatgatggagtca
accggattacctgctgttacgattcatcgcttattaggctggaatgggtcaaatggcttt
gaccgtcatgaggaaaatccgttagaaggcaaaatattaattgtggacgaatcatcaatg
gtcgatatatggctagctaatcaactctttaaagccctcccagaccagatgcaagtcata
cttgttggtgatgaggatcagcttccttcagttgggcctggtcaagtattaaaggactta
ttgagatcacagagtgtacctactgttagattaacagatatttatcgacaagccgaaggc
tcgtccatcattgaactcgctcatgaaattaagaaaggtacattaccagaagatatttcc
actcaaaagcctgaccgttcatttatcaagtgtgcttctacccaaatcgcggacgttgtc
aaaaaagtggcattaaatgcaaaaaataaagggtatacagcaaaggatatacaagtgctt
gcaccgatgtatagaggccctgcaggaattgataagcttaatgagcttttgcaagaaatt
ttcaatcccaatccagatggcacacgtaaagagcttgtatttggcgaagtgaaataccga
attggcgataaagtcctccaattagttaatcagcctgaaaatcatgtgtttaatggtgac
attggcgagattgtttccattttttatgcaaaggaaaatactgaaaaacaagacatgatt
gttgcatcctttgatggaatagaagcaacttatacaaggcaggacttgaatcaaattaca
catgcgtattgctgctcagttcataaatctcaagggagtgaatttccaattgtcattctc
ccagtagtaaagagctattatcgaatgctgagacgcaatttaatttatacagcgattact
aggagtcagcagtttttaattttgtgtggggaagaagacgcatttaagatggggattcaa
cgaggagacgatacagctcggcaaactagcttaacggaaaggctgaaagaaacgattggt
ttcataaacgaggagaattccgactttgaagaaaaaaaacgttcagcagaaattcagtta
acggaagaaaactatctgaacgttgatccgctaatagggatggaaaacattactccatac
gactttttaacagaagttccagttaattcgtag
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