Capnocytophaga sputigena: CGC55_05100
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Entry
CGC55_05100 CDS
T05393
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cspu
Capnocytophaga sputigena
Pathway
cspu00521
Streptomycin biosynthesis
cspu00523
Polyketide sugar unit biosynthesis
cspu00525
Acarbose and validamycin biosynthesis
cspu00541
O-Antigen nucleotide sugar biosynthesis
cspu01100
Metabolic pathways
cspu01110
Biosynthesis of secondary metabolites
cspu01250
Biosynthesis of nucleotide sugars
Module
cspu_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cspu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CGC55_05100 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CGC55_05100 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CGC55_05100 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CGC55_05100 (rfbB)
00525 Acarbose and validamycin biosynthesis
CGC55_05100 (rfbB)
Enzymes [BR:
cspu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CGC55_05100 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NmrA
NAD_binding_10
Sacchrp_dh_NADP
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
ATA83924
UniProt:
A0A2A3N214
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All DBs
Position
complement(1080637..1081629)
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AA seq
330 aa
AA seq
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MKRNILITGGAGFIGSHVVRLFVNKYPNYHIFNLDKLTYAGNLENVADVANAPNYTFIQA
DICDYERMKALIAEHHIDGIIHLAAESHVDRSIEDPFIFAKTNVMGTLSLLQAAREAWKD
NMQGKRFYHVSTDEVYGALEMDNTLFTEQTPYDPQSPYSASKASSDHFVRAYHNTYKLPV
VISNCSNNYGSHQYPEKLIPVCIYNIVDNKPLPIYGKGENIRDWLFVEDHARAIDTIFHQ
GKDGDTYNIGGFNEWRNIDLVKVIIKEVDKQLGRPEGTSEKLITFVTDRAGHDLRYAIDA
TKLKNELGWEPSLQFEEGIQKTVKWYLSNR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaacatcttaatcacaggaggagctggttttataggctctcacgtcgtaagg
ctatttgtaaacaaataccctaactatcacatttttaacttagacaaacttacttacgct
ggtaacttagaaaacgttgccgatgtagccaatgcccctaactacacctttatacaagcg
gatatttgcgactacgagcgtatgaaagccctcatcgctgaacatcacatcgatggaatc
attcacctcgctgccgaaagtcacgtggatagaagtattgaagacccttttatcttcgcg
aaaacgaacgtgatgggtactttgagcctcttgcaagcagctcgtgaagcgtggaaagat
aatatgcagggcaaacgcttttatcacgtttctaccgatgaggtatatggagctttagaa
atggataataccctctttacagagcaaactccttacgaccctcaatcaccttattcggct
tctaaagcctcatccgaccattttgtgagagcttatcacaacacttacaaattgcctgta
gtgatttcaaactgctctaacaactatggttctcaccaataccctgaaaaattgatacca
gtgtgcatctacaatattgtggataataaaccactaccaatctatggcaaaggtgagaat
atccgcgattggctttttgtggaagatcacgctcgcgctatcgataccattttccaccaa
ggaaaagatggtgatacctacaatattggaggctttaacgaatggcgtaatatcgatttg
gtgaaggtaatcatcaaagaagtagataagcaattaggtcgccccgaaggtacttccgaa
aaactcatcactttcgtaaccgaccgtgctggtcacgacctccgttacgctattgatgct
actaaattgaaaaatgaactcggttgggaaccttccttgcagtttgaagaaggtatccaa
aaaaccgtaaaatggtacctttctaatagataa
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