Clostridium scatologenes: CSCA_5002
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Entry
CSCA_5002 CDS
T03803
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
csq
Clostridium scatologenes
Pathway
csq00470
D-Amino acid metabolism
csq00550
Peptidoglycan biosynthesis
csq01100
Metabolic pathways
csq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CSCA_5002
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CSCA_5002
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CSCA_5002
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csq01011
]
CSCA_5002
Enzymes [BR:
csq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CSCA_5002
Peptidoglycan biosynthesis and degradation proteins [BR:
csq01011
]
Precursor biosynthesis
Amino acid ligase
CSCA_5002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
RimK
ATP-grasp
CPSase_L_D2
GARS_A
ATPgrasp_ST
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AKA72127
UniProt:
A0A0E3K445
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All DBs
Position
5421371..5422273
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AA seq
300 aa
AA seq
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MKIGVIMGGISSEREVSLNSGKEIVKYFNKEKYDVVPIVIDKKDDIIAKAKDIDFAFIAL
HGKFGEDGIIQAVLETMDIPYSGCGPLTSGVCMDKDITKKILRSAGINTADWLSVKSVEE
IDYDLIEKIGYPVVVKPNCGGSSVATNIIKKKEDIESAVSLALDYDTEVMIEKYVKGDEV
TCCMINGEVLPLIAIKPKAEFFDYTAKYADGGSDEIIVKLEEGIQNKIEEMALNCWKVLK
CNVYVRVDMIVKEGVPYVLELNTLPGMTKNSLFPKSAKAVNMSYTDLLEKITEYSLAEVR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataggagttataatgggtggaatatcttctgaaagagaagtttccttaaattca
ggaaaagagatagtaaaatattttaataaagagaaatatgatgttgttccaatagtaata
gataaaaaagatgatattattgcaaaagcaaaagatatagattttgcttttatagcactt
catggtaagtttggagaagatgggataatacaagcagtacttgaaactatggatattcct
tattctggatgtggtccattaacaagtggtgtatgtatggataaagatataactaaaaag
atattaagatcagcaggtataaatacagcagattggttgtctgtaaaatctgtagaagaa
atagattacgatcttatagaaaaaataggctaccctgtagtagtaaagcctaattgtgga
gggtcaagtgtagctacaaatataatcaagaaaaaagaagatatagaaagtgctgttagc
ttggcattagattatgatacagaagttatgatagaaaaatatgttaaaggtgatgaagta
acttgctgtatgattaatggagaagttcttccattaatagctataaagcctaaagcagaa
ttctttgattatacagcaaaatatgctgatggtggttcagatgaaattatagtaaaactt
gaagaaggaattcaaaataaaatagaagaaatggcattaaactgctggaaagttttaaaa
tgtaatgtgtatgtaagagtagatatgatagtaaaagaaggtgtgccatatgtgcttgaa
ttaaatacactaccaggtatgactaaaaatagcttattccctaaaagtgcaaaggctgta
aatatgtcatatacagatttattagagaaaataactgaatattcattagctgaagtaaga
taa
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