Clostridium saccharoperbutylacetonicum: Cspa_c12330
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Entry
Cspa_c12330 CDS
T02467
Symbol
rfbB2
Name
(GenBank) dTDP-glucose 4,6-dehydratase RfbB
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr00521
Streptomycin biosynthesis
csr00523
Polyketide sugar unit biosynthesis
csr00525
Acarbose and validamycin biosynthesis
csr00541
O-Antigen nucleotide sugar biosynthesis
csr01100
Metabolic pathways
csr01110
Biosynthesis of secondary metabolites
csr01250
Biosynthesis of nucleotide sugars
Module
csr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Cspa_c12330 (rfbB2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Cspa_c12330 (rfbB2)
01055 Biosynthesis of vancomycin group antibiotics
Cspa_c12330 (rfbB2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Cspa_c12330 (rfbB2)
00525 Acarbose and validamycin biosynthesis
Cspa_c12330 (rfbB2)
Enzymes [BR:
csr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Cspa_c12330 (rfbB2)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
KR
Motif
Other DBs
NCBI-ProteinID:
AGF55005
UniProt:
M1LQ40
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All DBs
Position
1362357..1363406
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AA seq
349 aa
AA seq
DB search
MKIYLVTGGAGFIGSNFILYMLTKYKDIKIINLDKLTYAGNLENLKSIENDKRYTFVQGD
ICDKDLVSSLFKINNINYVVHFAAESHVDRSIKEPEIFAKTNVLGTVNMLNCAKTAWGSE
EGFIDGVKFLHVSTDEVYGSLGDEGFFVETTPIDPHSPYSSSKASSDLMVKSYYDTYKMP
VNITRCSNNYGPFQFPEKLIPLLINNCLQHKDLPVYGDGLNIRDWLFVEDHAKAIDMVIN
GGRLGEVYNVGGHNERINIQIVKTVIEYINKNVDKNVTESLIKYIEDRKGHDRRYGIAPD
KIKTELGWYPETSFEVGIKKTIKWYLDNSKWMKNVTSGEYQKYYDKMYN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatatttagttacaggtggagcaggatttataggttcgaatttcattttatat
atgttaacaaaatataaagatattaaaataataaatttagataagttaacttatgcagga
aacttagagaatcttaaatctattgaaaatgataagagatatacatttgttcaaggagat
atttgtgataaagatttagtttcaagtctttttaaaattaataatataaattatgttgtt
cattttgcagcagaatctcatgttgacagaagtataaaagagccggaaatatttgctaaa
acaaatgtattaggaactgtaaatatgctcaattgtgcaaaaactgcttggggaagtgaa
gagggatttattgatggagtgaaatttcttcatgtatcaacagatgaagtttatggttct
ttaggagatgaaggcttttttgtggaaacaacaccaatagatcctcatagtccatattca
tcaagcaaagcaagttcagacttaatggttaaatcttattatgatacttataaaatgcca
gttaatataacaagatgttcaaataactatggaccatttcaatttccggagaagttaata
ccattattaatcaataactgtttgcagcataaagatcttcctgtatatggagatggatta
aatataagagattggttgtttgtagaagaccatgcaaaagcgattgatatggttattaat
ggaggtagacttggagaagtctataatgttggaggccataatgaaaggataaatatacaa
atagtaaagacagtaattgaatatataaataaaaatgtagataaaaatgttactgaaagt
ttaataaaatatattgaagatagaaaaggtcatgatagaagatatggaatagctcccgat
aagataaagacagaacttggctggtatccagaaactagttttgaagttgggattaagaag
actattaagtggtatttagataattcaaaatggatgaaaaatgtaacttctggagaatat
caaaagtattatgataagatgtacaactaa
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