Clostridium saccharoperbutylacetonicum: Cspa_c14920
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Entry
Cspa_c14920 CDS
T02467
Symbol
hemD
Name
(GenBank) porphyrin biosynthesis protein HemD
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr00860
Porphyrin metabolism
csr01100
Metabolic pathways
csr01110
Biosynthesis of secondary metabolites
csr01120
Microbial metabolism in diverse environments
csr01240
Biosynthesis of cofactors
Module
csr_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Cspa_c14920 (hemD)
Enzymes [BR:
csr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
Cspa_c14920 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
Cspa_c14920 (hemD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
HEM4
Radical_SAM
DUF6376
BRCT
Motif
Other DBs
NCBI-ProteinID:
AGF55262
UniProt:
M1MUS6
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All DBs
Position
1630795..1632270
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AA seq
491 aa
AA seq
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MSQVYIIGTGPGDEELLTLKAVKALKKCTAVLYDRLVSNNILNYLNENCEVYYCGKEPGA
HSKTQEEINELLVELAKKGHIVGRIKGGDPYVFGRGGEEVLELRKENISFEVVPGVTSPI
AVLNYAGIPITHRGIAQSFHVVTGKSAQDLNVNFKALAGEQGTLVFMMGLSNLDNIISQL
IANGKSPLTPCGVVMRGTSAKQKKVIGTLENISEKVKAANLKSPCIIVVGEVVTLNESLS
WYENKPLFGKNICITRTKKQSENLKEKLVKMGAEVTSFNAIEIESCAEKLDEYLNTIENY
DHIVFTSVNSVEIFFDYLVEKAYDVRRIKAKISAIGRATERALNNRGIVCFAKAKEFVGE
GLVSILKPNLKVNEKLLLPCSAKSRQYIYEELVRTGVEVDRVFIYDTICGKVVNKKSFEE
VDIVFFTSPSTVKNMVDMLGIDEIKKKQVIAIGPKTNEPLIELGIEAYVCKEHSEDGFLK
EIENLLLRERK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagtatatataataggaacaggacctggtgacgaagaattattaacattgaaa
gcagtaaaggcacttaagaagtgtacagctgttctttatgatagattagtttcaaataat
atattaaattatttaaatgaaaattgtgaagtttattattgcggaaaagagcctggggct
cattcaaaaactcaagaggaaataaatgaactcttggttgaacttgcaaagaaaggacat
atagttggaagaataaagggtggagacccttatgtttttggaagaggtggagaagaggta
ttagaattaagaaaagaaaatatttcttttgaagttgttccaggggtaacatcgcctatt
gcagtattgaattatgctggaattccaataactcatagaggtattgcacaaagttttcat
gttgtaactggtaaatcagcacaagatttaaatgttaattttaaagctttagctggggaa
caaggaaccttagtttttatgatggggctaagcaatctagataatattattagtcagtta
atagctaatggtaaatcaccattaactccatgtggagttgtaatgcgagggacttcagca
aaacaaaaaaaggtaataggaacattagaaaatatatctgaaaaagttaaagcggcaaat
ttaaaatcaccatgtataatagtggttggagaagttgtaactttaaatgaaagtttaagt
tggtatgaaaataagccactttttggtaaaaatatctgtattacaagaactaaaaagcag
tcagagaatctaaaagagaaattagtaaaaatgggtgcagaagttacaagctttaatgct
atagaaatagaaagctgtgcagaaaagttagatgaatatttaaatacaatagagaattat
gatcatatagtgtttacttcagttaatagtgtggaaatattttttgattatttagttgaa
aaagcgtatgatgtaagaagaattaaggctaagatttctgcaattggccgtgccactgaa
agagccttaaacaatagaggtattgtatgttttgcaaaggctaaagaatttgtaggtgaa
ggcttagtaagtattttgaaacctaacttaaaggtaaatgaaaagttacttttaccatgt
tcagctaagagcagacaatacatatatgaagaattagttagaacaggtgttgaagtagat
agagtatttatttatgatacaatttgtggtaaggtagtaaataaaaaatcttttgaagaa
gttgatatagtattttttacaagtccatctactgtgaaaaatatggttgatatgttagga
atagatgaaataaaaaagaaacaggttatagctataggacctaagacaaatgaaccttta
atagaattaggaatagaggcttatgtatgtaaagaacattctgaagatggttttttaaag
gaaatagaaaacttattattaagagagaggaagtga
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