Collinsella stercoris: LK434_03365
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Entry
LK434_03365 CDS
T07953
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
cstc
Collinsella stercoris
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cstc03009
]
LK434_03365 (der)
Ribosome biogenesis [BR:
cstc03009
]
Prokaryotic type
GTPases
LK434_03365 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
GTP_EFTU
KH_dom-like
FeoB_N
AIG1
Dynamin_N
RsgA_GTPase
cobW
SRPRB
Roc
Ras
ABC_tran
NTPase_1
TniB
AAA_22
NB-ARC
RNA_helicase
AAA_16
AAA_18
AAA
AAA_14
MCM_C
KTI12
Motif
Other DBs
NCBI-ProteinID:
UEA46149
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Position
788576..789910
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AA seq
444 aa
AA seq
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MSRPIVAIVGRPNVGKSTLVNRIAQTSDAIVHQSRGVTRDRSYHVADWNGREFTLVDTGG
IEPMKSDDVFATSIRDQALAAAEEAAVILFVVDGSVGVTEEDESVARMVRKLKKPTFLLV
NKLDNPARENDNLWEFYSLGVGDPVAVSALHGHGTGDLLDEVVALLPEDAGEEDEPDTLR
VAIIGRPNAGKSSLFNKMIGNDRSIVSNIAGTTRDAIDTVVERDGKRYRMVDTAGIRKKS
TVYENIEYYSMVRGLRAIDRADVALLVVDASTGVTEQDQKVANLAIERGCALVVLLNKWD
LLKDDYERDAVMETVDRRLTMAPWAEYLRISAMTGRSVHKIWDMVDAAAERRACHITTSQ
LNRLLTDMREFGHTVSDGKRRLKMHYVTQTGEKPPAFTFFVNHTDLVTDNYKRYIENRMR
ATFDFKGTPIRLRFRAKKSDKDKE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacccatcgtagcgatcgtcggccgcccgaacgtgggcaagtcgacgctcgtc
aatcgtatcgcccagacctccgacgccatcgtgcaccagagccgcggcgtcacccgcgac
cgcagctaccacgtggccgactggaacggtcgcgagttcacgctcgtcgacaccggcggc
atcgagcccatgaagagcgacgacgtgttcgccacctccatccgtgaccaggcgctcgcg
gcggccgaggaggccgccgtcatcctgttcgtcgtcgacggctcggtgggcgtcaccgag
gaggacgagagcgtggcgcgcatggtgcgcaagctcaagaagcccacgttcctgctcgtc
aacaagctcgacaaccctgcccgcgagaacgacaacctgtgggagttctactccctgggc
gtcggcgacccggtcgcggtctccgcgctgcacggccatggcacgggtgatctgctcgac
gaggtcgtcgcccttctgcccgaggatgcgggcgaggaggacgagcccgacaccctgcgc
gtcgccatcatcgggcgccccaacgccggcaagtcctcgctcttcaacaagatgatcggc
aacgaccgctccatcgtgagcaacatcgccggcaccacgcgcgacgccatcgacacggtg
gtcgagcgcgacggcaagcgctaccgcatggtcgacaccgcgggcatccgcaagaagagc
accgtctacgagaacatcgagtactactccatggtccgcggcctgcgcgcgatcgatcgc
gccgatgtggccttgctcgtggtcgacgcgtccacgggcgttaccgagcaggaccagaag
gtcgcgaacctcgccatcgagcgcggctgcgcgctcgtcgtcctgctcaacaagtgggac
ctgctcaaggacgactacgagcgcgatgccgtcatggagacggtcgaccgccgcctcact
atggccccgtgggccgagtacctgcgcatctccgccatgaccgggcgcagcgtgcataag
atctgggacatggtggacgccgccgccgagcgccgcgcctgccacatcaccacgtcgcag
ctcaaccgcctgctcaccgacatgcgcgagttcggccacaccgtctccgacggcaagcgc
cgcctcaagatgcactacgtcacgcagaccggcgagaagcccccggcgttcacgttcttc
gtcaaccacacggacctggtcactgacaactacaagcgctatatcgagaaccgcatgcgc
gcgacgttcgatttcaagggcacgccgatccgcctgcgcttccgcgccaagaagtccgac
aaggacaaggagtag
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