Collinsella stercoris: LK434_09920
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Entry
LK434_09920 CDS
T07953
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cstc
Collinsella stercoris
Pathway
cstc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cstc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LK434_09920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cstc02000
]
LK434_09920
Transporters [BR:
cstc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LK434_09920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_21
AAA
RsgA_GTPase
MMR_HSR1
AAA_30
AAA_16
AAA_5
AAA_28
AAA_7
T2SSE
AAA_29
Rad17
AAA_23
TsaE
Motif
Other DBs
NCBI-ProteinID:
UEA45423
LinkDB
All DBs
Position
2338014..2339987
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AA seq
657 aa
AA seq
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MPNPYASTAGASTITATVSGNDNLNDFHDPRGGDRQRESMGAREVARRIFTYVRPHAGLF
TASFACAALSVVLQLFVPILIGCAIDLIVGAGRVDLASLIPLLVQLAATVLAAAALQWVQ
GACVNRLSCATVRDLRTEAYDKLTCVPLSLIDRHPHGDYISRVVNDVDQVGDGLLQGLTQ
LFNGVVTIAATLVFMFTTSVPMAFLVVLVTPFAVLAAGAMARFAGRSFAAQMGIQGELSA
YVEEYVGAQRLVSSFAYGDRAREGFAHINRELYTAGERAQFLSSLANPGTRFVNNCMYAV
VAVAGFVGVVTGFPAVLTVGDVQVFLSYANQYTKPFNEISGVVTQIQGAFASARRVFALL
DAPEDGAGEAPTAVSPIAPRADDGAATGLTCGSAPCIELDAPALGGASPAGPLVGDVVFD
HVDFSYVPGHPLLQGICLHARPGMRMALVGPTGCGKTTLINLLLRFYDVDAGEIRVNGKP
TTAYAREDLRRAFGMVLQESWLFEGSVHDNIAYGCPGASREQVEDAARRARADAFIRALP
AGYDTVLPENGGSLSQGQRQLLCIARVMLADPEILLLDEATSSIDTRTELQVQAAFDDLM
RGRTSFVVAHRLSTIREADCILVMRDGRIVERGTHDGLLAAGGFYAELYNSQFATTC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatccatacgcctcgaccgccggtgcctccaccatcacggcgaccgtttcggga
aacgacaacctcaacgactttcacgatccgcgcggtggcgatcggcagcgggaatccatg
ggcgcccgggaggtagcgcgccgcatcttcacctacgtgcgcccccatgcagggctgttc
acggcgtcctttgcatgcgccgcgctctcggttgtcctgcagctcttcgtgcccatcctc
atcggctgcgccatcgacctcatcgtgggtgcgggccgcgtcgacctggcgtccctgatc
cctctgctcgtccagctcgccgcgacggtcctcgcggccgccgccttgcagtgggtgcag
ggcgcgtgcgtgaatcgcctgtcctgtgcgaccgtgcgcgacctgcggaccgaggcgtat
gacaagctcacgtgcgtgccactctcgcttatcgaccgccatccgcacggcgactacatc
tcgcgcgtggtcaacgacgtcgaccaggtgggcgacggcctgctccagggcctaacgcag
ctgttcaacggcgtggtgaccatcgcggccaccctcgtcttcatgttcacgacctcggtt
cccatggcgttcctcgtggtgctcgtcacgccgtttgccgtgctcgcggcgggcgcgatg
gcccggtttgcagggcggagctttgccgcgcagatgggcatccagggcgagctgtccgcc
tatgtcgaggagtacgtgggggcgcagcgcctggtgagctcctttgcctatggggaccgt
gcgcgggagggctttgcgcacatcaaccgcgagctctacaccgcgggcgagcgcgcgcag
tttttgagctcgctcgcgaacccgggcacgcggttcgtcaacaactgcatgtacgcggtg
gtggcggtcgcgggatttgtgggcgtcgtcacggggtttcccgccgtgctcaccgtgggc
gacgtgcaggtgttcctgtcgtatgcaaaccaatacaccaagccgttcaacgagatctcg
ggcgtggtgacgcagatccagggcgcgttcgcctctgctcgtcgcgtattcgccctgctc
gacgcccctgaggacggcgcgggggaggcgccgacggccgtttcgcccatcgccccccgc
gcggatgacggggctgcgacgggcctcacgtgcggctccgctccttgcatcgagttggat
gcacctgcccttggcggcgcatctcccgccggcccgctcgtcggcgacgtcgtcttcgat
cacgtggacttttcctacgtgcctggacacccactgctgcagggcatctgcctgcacgcc
cgtcccggcatgcgcatggcgctcgtgggtcccacgggctgcggcaagaccaccctcatc
aacctgctgctgcgcttttacgatgtcgacgcgggcgagatccgcgtaaacggcaagccc
accacggcgtatgcgcgcgaggaccttcgccgcgcgttcggcatggtgctgcaagagagc
tggctgttcgaggggtcggtacacgacaacatcgcctacggctgcccgggagcctcgcgc
gagcaggtggaggacgccgcccgtcgcgcccgcgcagacgcgttcatccgtgcgctcccc
gcaggctacgacacggttctgcccgagaacggagggtcgctctcgcagggtcagcgtcag
ctgctgtgcatcgcgcgcgtcatgctcgcggaccccgagatcttgctgctggatgaggcc
accagcagcatcgacacgcgtaccgagctccaggtccaggctgcgttcgatgatcttatg
cggggccgcacgagctttgtggtggcgcaccgcctgagcaccatccgcgaggcggactgc
atcttggtcatgcgcgacgggcgcatcgtcgagcgtggcacgcacgacgggctcctcgcc
gccggcggcttctacgccgagctttacaacagccagttcgcgacgacgtgctga
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