Colius striatus (speckled mousebird): 104552640
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Entry
104552640 CDS
T08355
Symbol
LAMC1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti04510
Focal adhesion
csti04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104552640 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104552640 (LAMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_B
BST2
GCIP_N
Motif
Other DBs
NCBI-GeneID:
104552640
NCBI-ProteinID:
XP_010208021
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MKNELGKLVCNCKHNTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDP
ELYRSTGHGGHCMGCSDNTDGAHCERCRDGFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQ
CSCKPGVMGEKCDRCQPGFHSLSEAGCRXEGLPCSCNLAGSTGECNVETGRCSCKDNVEG
FHCERCKPGFFHLDVSNPKGCTPCFCFGHSSVCTNAIGYSIYSITSSFQFGEDEWRAEQR
DGSEVSLQWSAETQDISVISDSYFPLYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDTRLS
AEDLVLEGAGLRVSVPLIAQGNSYPSENVLTYTFRLHEATDYPWRPALTAFDFQKLLHNL
TSIKIRGTYSERSAGHLDDVTITSARPGAGVPAAWVESCSCPAGYEGQFCERCSPGYRRE
TPSLGPYSPCVPCACNGHSETCEPETGVCNCRDNTAGSHCEKCSDGYYGDATTGTAADCQ
PCPCPGGSSCAIVPRTKEVVCTSCQAGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCN
DNIDPNAVGNCDRQTGECLKCIYNTAGFYCDRCKDGFFGNPLAPDPADKCRACHCNPYGT
VNQQTNCNQVTGQCECLSHVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTNGQCDIRS
GQCECQPGVAGQRCDRCEANHFGFSSEGCKPCDCDPEGSRSLQCREDGRCECKEGFVGSR
CDQCEENYFYNRSWPGCQECPACYRLVKDKVAEQRERLQELENLIANLGMGEETVTDQAF
EERLKQAERDVMELFHEAQNSKDVDQGLMDRLKDINSTLVSQLNRLRNIQGMVQETESLA
EQARVRVEDTEDLITLASDMLEKAKMAAANVSITPPESSGDPNNMTLLAEEARRLAERHK
KEADEIVRIAKAANDTSTEAYQLLLKTLAGENQTASDIDELNQKYNQARNISRDLEKQAN
KVLAEAEEAGDRALQIYANLTSLPAVDSAGLENEANKIKKEADELDQLIARKLKDYEDLR
EDMKGKELEVKNLLEKGKTEQQTADQLLARADAAKALAEEAARKGNGTLQEANTILNNLK
DFDKRVNDNKTAAEEALKKIPAITQTIAEANNKTRQAELALGNAAADAREAKAKADGAEK
IAGSVQESAAATKAEADKTFADVTALAREVDDMMKQLQDAEKELKRKQDDAEQDMMMAGM
ASQAAQEAEDNARKAKNSVNSLLTVINDLLDQLGQLETVDLNKLNEIEGTLNSAKEQMKD
SDLDQKVSFLEREARKQDDAIQSYNRDIEEILKDISNLEDIKKTLPSGCFNTPSIEKP
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgagcttgggaagctggtctgtaactgcaaacacaacacctttggggtcgac
tgtgaaaagtgtcttcctttctttaacgaccgtccgtggaggagagcgacagcagaaagc
gccaatgagtgcttgccttgcgactgcaacgggaggtctcaggagtgctacttcgaccct
gaactgtaccgctcgacgggccacgggggccactgcatgggctgctcagacaacaccgat
ggtgcccactgcgaaaggtgcagggatggcttctatcgcctgggcagcgaggaggggtgt
ctgccctgcagctgcaacccagttggctccctcagcacacagtgtgacagctatggccag
tgcagctgcaaacccggtgtgatgggtgagaagtgtgaccggtgccagccaggtttccac
tctctctccgaagccgggtgcaggtaagagggactgccttgctcttgcaatctggctggc
agcacaggggaatgcaatgttgagacaggacggtgttcgtgcaaggacaatgttgagggc
ttccactgtgagagatgcaaacctggatttttccatctggatgtctccaatccaaaaggc
tgtaccccctgcttctgttttggacactcttcagtctgtaccaatgccattggctacagt
atctacagcatcacctccagcttccagtttggagaggacgagtggcgagctgagcagcgt
gatggctcagaagtctcgctccagtggagtgcggagacccaggacatctctgttatctca
gacagctacttccccctgtattttgttgcaccacgcaagttcttgggcaaccaggtttta
agttatgggcagaacctgaccttctccttccgcgtggacagacgggacacacgcctctct
gcagaggacctggttctggaaggggctgggctgagagtgtcggtgccactcattgcccag
ggcaactcttaccccagcgagaacgtactgacttacaccttcaggcttcatgaggctaca
gattacccgtggaggcctgcgcttacagcatttgacttccagaaacttctgcacaacttg
acttccatcaagatccgtgggacgtacagtgagagaagtgccggccacctggatgacgtg
accatcacaagtgctcgccctggagctggcgtgcctgcagcctgggtggagagctgctcc
tgcccggcgggatacgaggggcagttctgcgagcgctgctcccctggctaccggcgagag
acaccaagcctggggccctacagcccctgcgtgccttgtgcttgcaacgggcacagcgag
acctgtgagcccgagacaggtgtgtgcaattgcagggataacaccgcggggtcgcactgt
gagaagtgcagcgatggctattatggagacgcgaccacaggaacagccgcggactgccag
ccttgcccctgcccaggcggctccagctgtgccattgtgccccgcaccaaggaggttgtg
tgcaccagctgccaggctggcactacaggcaagaggtgtgagctgtgtgacgatgcctat
tttggagacccactgggtgaaaacggtgccgtgaggccttgtcgcctctgccagtgcaat
gacaacatcgaccccaacgccgtgggcaactgcgaccgccagacaggcgagtgcctcaag
tgcatctacaacaccgccggcttctactgcgaccgctgcaaggacggcttcttcgggaac
cccctggcccccgatcctgccgacaagtgcagagcttgccactgcaatccctacggtact
gtgaatcagcagacaaattgcaatcaagtgactgggcagtgcgagtgcctgtctcatgtc
accgggagggactgcagtgcctgtgagcctggcttcttcaacctccagagtggacgtggc
tgtgagaggtgcaactgccacgcgctgggctccaccaacgggcagtgcgacatccgcagc
gggcagtgcgagtgccagcctggcgtcgccggccagcgctgcgaccgctgcgaggccaac
cacttcggcttcagctccgagggctgtaaaccctgtgactgtgaccccgagggctcacgc
tccctgcagtgccgggaggacggtcgctgcgagtgcaaggaaggcttcgtggggagccgc
tgtgaccagtgtgaggagaactacttctacaaccgctcgtggccgggctgccaggagtgc
ccagcctgttacagactggtgaaggataaggtggcagaacaacgggaaaggttgcaggag
ctggaaaatcttatagcaaatctgggtatgggagaagaaactgtaactgatcaagccttt
gaggagagattgaagcaggcagagagagatgttatggagttgttccatgaagcacaaaac
agcaaagacgtggatcagggccttatggatcgtctcaaggacatcaacagcacactagtg
agtcagctcaacaggctgaggaacatccagggcatggtgcaggagacagagagcctggca
gagcaagcccgggtgcgggtggaggacacagaggacctgatcaccttagcttctgatatg
cttgagaaggcaaagatggcagctgccaacgtgtccattacacctccagagtcaagtggg
gacccgaacaacatgactctattggcagaagaggcccgtaggctggctgagagacacaaa
aaggaagctgatgagatcgttcgcatagccaaagcagctaacgatacttccacagaagca
tatcagctgctgctgaagacattggctggagaaaaccaaactgccagtgacattgatgag
ctcaaccagaagtataatcaagcaaggaacatttctcgagacctagagaaacaggccaac
aaggtccttgcagaggcagaggaggctggagacagagccctacagatctacgctaatctc
accagtctgcctgctgtggattctgcagggctggagaatgaagcaaataagatcaagaag
gaagcggatgagttggatcagctaatcgccaggaagctgaaagattatgaggacttgaga
gaagacatgaaaggaaaggagttagaagtaaagaacctcttggagaaagggaagacagag
cagcagactgcagaccagctcttggctcgagcagatgcagcaaaagccctggcagaagaa
gctgctcggaagggcaatggcacactccaggaggccaataccattctcaacaacctgaaa
gattttgataagagagtgaatgacaacaagacagcagcagaggaggcactgaagaagatc
cctgccatcacccagaccattgctgaggccaacaacaagacgcgccaggcagagctggcg
ctgggcaatgctgctgctgacgcccgtgaagccaaggccaaggcagatggtgctgagaaa
atcgctggttctgttcaggagagtgctgctgctaccaaagctgaagctgacaagactttt
gctgatgtgacggcactggccagggaggtggacgacatgatgaagcaactacaagatgca
gaaaaagagctgaagcggaagcaggatgatgctgagcaggatatgatgatggcaggcatg
gcctcacaggctgcccaggaggcagaagacaacgcaaggaaagcaaagaactctgtgaac
agcttgctcactgtcattaatgacctgctggatcaattagggcaactggagacagtggac
ttgaacaaactgaatgaaattgagggcaccctgaacagtgccaaagagcagatgaaagat
agcgacctggaccagaaagtctctttccttgagagagaagccaggaagcaagacgatgcg
atacagtcctacaacagggacattgaagagatcctgaaggacattagcaacctggaagac
atcaagaagactttgccatctggctgttttaacaccccgtccattgagaaaccctaa
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