Cytobacillus suaedae: IM538_17780
Help
Entry
IM538_17780 CDS
T08143
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
csua
Cytobacillus suaedae
Pathway
csua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IM538_17780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csua03400
]
IM538_17780
Enzymes [BR:
csua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IM538_17780
DNA repair and recombination proteins [BR:
csua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IM538_17780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
AAA_12
AAA_22
AAA_16
nSTAND3
AAA
DEAD
NTPase_1
T2SSE
AAA_18
AAA_28
TsaE
AAA_17
AAA_29
DUF4926
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QOR65640
LinkDB
All DBs
Position
complement(3323487..3325892)
Genome browser
AA seq
801 aa
AA seq
DB search
MVQQNSLDLFQEQQKFMKGTHLVTIFHNEKNLYSVVRIRLQETNLEYSEKEAVVTGYFPR
IHEDETYLFFGEIKEHPRFGTQFHVEHFRKELPQSKQGIIQYLSGELFKGIGKKTAENIV
DTLGESAISKILENPNVLSEVPKLSKDKAKEIYESLREHQGLEQIMISLSQFGFGPQISM
RIYQTYKDQTLEIIQDNPYKMVEDVEGVGFGRADELGHQIGISGAHPDRIRAGCLYILEQ
DSIQEGHVYLYIYQLVEKVKELLEHNNRENVTEFDISREITSLAEEGKLVIGEERVYVPS
LYFSEKGLVTNITRVLEQTEYKDSFPESEFLLALGKLEERLKVEYAPSQKEAIQTALMSP
MLLLTGGPGTGKTTVIKGIVELYSELHGCSLDPKDYNNENPFPVLLVAPTGRAAKRMSEA
TGLPAVTIHRLLGWNGVEGFVHDEDNPIEGKLLIVDEVSMVDVWLANQLFKSLPKSIQVV
LVGDEDQLPSVGPGQVLKDLLNANVVPTVLLTDIYRQSQGSSIIDLAHDIKNGGLPPDIS
TPKSDRSFIKCNQSQILDVVKKVAQNAKEKGYTSRDIQVLAPMYRGSAGIDQLNVMLQDL
FNPKTEQKREMQFGDTVYRIGDKVLQLVNQPESNVFNGDIGEIVSIFYAKENTEKQDMVV
ISFEGNEVTYIKQDLTQITHAYCCSIHKSQGSEFPIVILPVVKSYFRMLRRNLIYTAITR
SKNFLILCGEEDALRQSIRRNDDGQRQTTLTEKLQQLHSNDDHSIKRLNETHNEDEVPFM
KDAFIGMENLSPYDFMEDSER
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaacaaaactctcttgacttatttcaagagcaacagaaatttatgaaaggcact
catttagttacgatatttcataacgagaaaaacttatattctgttgtccgcattcgatta
caagaaacaaacttagagtattcagaaaaggaagccgtcgtaactggatatttccctcga
attcatgaagatgaaacatacctattttttggagaaataaaagaacatccaaggtttgga
actcaatttcatgttgagcattttcgaaaggaactaccacagtctaaacaaggaatcatt
caatatttatcaggtgaattatttaaaggaattggtaagaaaacagctgaaaatattgtt
gatacacttggggaaagtgctatttctaagattttagaaaatccaaatgtacttagtgaa
gtacctaagctatcaaaagataaagcaaaagagatttatgaatccctcagggagcatcaa
ggtttagaacaaattatgattagtctatctcaatttggatttggacctcaaatttcaatg
agaatttatcagacatataaggatcaaacattagaaatcatacaagataatccatataaa
atggttgaagatgttgagggtgttgggtttggtcgggctgatgaattaggacatcaaatt
ggaatctcaggtgcgcatccagatcgaattcgagcaggttgtttgtatattcttgaacaa
gattcgatacaagaggggcatgtttatttatacatatatcaactagtagagaaagtaaaa
gaattacttgagcataataatagagaaaatgtaacggaattcgacatttctcgggaaata
acttccttggcagaggaaggaaagcttgttattggggaggaaagagtatatgttccttca
ttatatttctcagaaaaaggattagtaaccaatattactcgtgttctcgagcaaactgaa
tataaggacagttttccagaaagtgaatttctattagcacttggaaagctggaagagaga
ttaaaagtggagtatgcaccttcacaaaaagaagccattcaaactgccttaatgtctcca
atgcttttattaacaggtggaccaggaacaggaaaaacaaccgttattaaagggattgtt
gagttatatagtgaattacacggctgttcccttgacccgaaggattataataatgaaaat
ccatttccggtattactagtggcacctacagggcgtgcagcaaaacgaatgagtgaagcg
accggtttacctgcagtaaccattcatcgattactcgggtggaatggagtagaaggtttt
gtccatgacgaagataatccaatagaaggcaagctattaattgttgatgaagtatctatg
gttgatgtatggcttgcaaatcagttatttaagtcattaccgaaatctatccaagtggtt
cttgtaggcgatgaagatcaacttccttcagtgggacctgggcaggttcttaaagactta
cttaacgcaaatgtcgttccaacggtcttattaacggatatttataggcaatcccaagga
tcatccataattgatttagcacatgatattaaaaatggtggattgccccctgatattagt
acacccaaatcggaccggtcatttattaagtgtaatcaatcacaaatattagatgtagta
aaaaaagttgctcaaaatgctaaagaaaagggatatacttctagagacatacaggttcta
gctccaatgtatcgtggatctgctggcatagatcaattaaatgtcatgcttcaagatctg
tttaaccctaaaacagaacaaaagcgtgaaatgcaatttggagataccgtttatcgaata
ggtgataaagttctccaactggtaaatcagccagaaagtaatgtctttaatggagatatt
ggcgagatcgtatccatcttttatgctaaggaaaatactgaaaaacaagatatggtggtc
atctcatttgaaggaaatgaagttacctatattaagcaggatttaacccaaattacgcat
gcttactgttgttctattcacaaatcacagggaagtgagtttccaattgtcattcttcca
gttgtgaaaagttattttaggatgttaagaagaaatttaatctatacagcaataacccgc
agtaaaaactttttgatactatgtggagaagaagatgctcttcgtcaaagtattcgcaga
aatgatgatggtcaacgacaaaccacgttaacagagaagctgcaacaattacatagtaac
gatgatcattcaataaaaagactaaatgaaacgcataatgaagatgaagttccttttatg
aaagatgcatttattggaatggaaaacctttcaccgtatgactttatggaagatagtgaa
agataa
DBGET
integrated database retrieval system
