Cucumis sativus (cucumber): 101207280
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Entry
101207280 CDS
T02486
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101207280
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csv04147
]
101207280
Membrane trafficking [BR:
csv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
101207280
Exosome [BR:
csv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101207280
Exosomal proteins of bladder cancer cells
101207280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
zinc_ribbon_9
Motif
Other DBs
NCBI-GeneID:
101207280
NCBI-ProteinID:
XP_011649252
UniProt:
A0A0A0LM21
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Position
2:complement(12621377..12626726)
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AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNADLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGLQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFAISGDSLFYVKDRFLRYYEFSTQKDTQVVPIRRPG
STSLNQSPRTLSFSPTENTILVCSDLDGGCYEFYTIPKDSFGRSDSLQDAKRGLGGSAVF
VARNRFAVLDKSHNQVLLKNLKNEIVKKVPIPITADAIFYAGTGNLLCRAEDRVVIYDLQ
QRIILGDLQTPFVKYVVWSNDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTLFCLDRDGTVRSLIIDATEYI
FKLSLLKKRFDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNTAKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERVKILENVGHLPLAYITASTHGLHDVAERLAAEL
GDDIPSLPEGKTASLLLPPIPVMCGGDWPLLRVMKGIFEGGLDNVGAGRADEDDDEVADG
DWGEELDVVDVDGLQNGDVAAILDDVEGAEENEEEGGWDLEDLELPPEADTPKVSVTSRN
SVFVAPTPGLPANLVWTQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLRPIFLDLHA
GSQTYLRAFSSAPIISLAVERGFSESSNANAKGSPALIYSFSQLEEKLKAGYKATTTGKF
SDALRLFLSILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKNNPVRQME
LAAYFTHCNLQLPHLRLALLNAMTVCYKAKNLASAANFARRLLETNPSIENQAKTARQVL
QAAERNMTDASQLNYDFRNPFVTCGATYVPIYRGQKDVSCPYCSSRFVPSQEGQLCSVCD
LAVVGADASGLLCSPTQNR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagtttgaaaccaagagtaatagagtcaaagggttgagtttccatagtaag
aggccatggatccttgcaagtcttcacagcggagtgatccagctatgggattaccggatg
ggcacgcttattgatagatttgatgagcatgaagggcctgttcggggtgttcactttcac
aagtctcagcctctttttgtgtctggaggggatgattataagattaaagtgtggaactat
aagactcatagatgtctatttactcttcttggacacctggattatatacgtactgtgcaa
tttcaccatgagtatccatggattgtgagtgctagtgatgatcaaactattcgtatatgg
aactggcaatcacgtacatgtatctccgttttgacgggccacaatcactacgtaatgtgt
gcttcattccaccctaaggaagatcttgttgtgtcagcttcccttgatcagaccgttcgt
gtttgggatattggtgccttgaggaagaagactgtgtctccagcagatgatatcttgcgg
ttgagtcaaatgaatgctgatctatttggtggagttgatgctgttgttaaatatgtactg
gaaggtcatgatagaggggttaattgggcggcattccatcccaccctgccgttgatcgtg
tcaggggctgatgatcgacaagtgaagttgtggcgaatgaacgacacaaaagcatgggaa
gtggacactctaagggggcacatgaataatgtttcgtgtgtgatgttccatgcgaaacaa
gatattattgtttccaattcagaggataaaagtattcgaatttgggatgctacaaaacga
actggacttcagacatttcgcagggagcatgatagattttggattcttgctgctcatcct
gagatgaatttattggcagcagggcatgacagtggcatgattgtttttaagttggagaga
gaaaggccagcctttgctattagcggcgattctctattttatgtgaaggaccgatttttg
cgctattatgagttctccactcaaaaagatacacaggtcgttccgattcgccggcctggt
tcaactagcttgaatcagagcccacggaccctttcatttagccctacggaaaacacaatt
cttgtttgctcagatctggatggggggtgctatgaattttacaccatacccaaggatagc
tttggtagaagtgatagcttgcaagatgcaaagagaggacttggaggatcagcagtgttt
gtggctcgaaataggtttgctgtgctcgataaaagtcacaaccaagtcttgttaaaaaac
cttaagaatgaaattgttaagaaggtccctattcccattactgcagatgcaatattttat
gctggaactggtaatttattgtgccgagcagaagatagagttgttatttacgatctccaa
cagagaataattcttggtgatcttcaaaccccttttgtcaagtacgttgtttggtccaat
gatatggagagtgtagcattgcttagcaaacatgcaattattattgctaacaagaagctt
gttcaccagtgcacacttcatgaaacaattcgcgtaaagagtggagcatgggatgataat
ggcgtttttatttacacaaccctaaaccacattaagtattgcctccccaatggagatagt
ggtataatcagaacccttgatgttccaatatatatcacaaaggtgtctggcaatactctt
ttctgcttggatagggatggaacagttcgatcgttgattattgatgcaacagaatacata
ttcaagctttctctcttgaagaagagatttgaccatgtcatgagcatgataaggaactcc
cagctctgtgggcaagcaatgattgcatatttgcagcaaaagggatttccagaagttgca
cttcactttgtgaaggatgaaagaaccaggttcaatttggctcttgagagtggaaacatt
cagattgcagttgcatctgctacagcaatcgatgaaaaagatcattggtataggctgggt
gtggaggctcttcgtcaaggcaatgcaggcatcgttgaatacgcgtaccagaagacaaaa
aattttgagaggttatcattcctttatctcataactggcaacacagcaaaactatccaag
atgttaaagattgctgaagttaagaatgatgtcatgggtcaatttcacaatgctctatat
cttggtgatgttcgtgagcgtgtaaagatcctggagaatgttggccacttacctcttgcg
tacatcacagcttctacccatggtttgcacgatgtagctgaaaggctcgctgctgaattg
ggagatgacattccatctttaccagaaggcaagaccgcatccctcctcttgcctcccatt
ccagtcatgtgtggcggtgattggccacttctgagagtcatgaaaggaatattcgaaggt
gggctcgataatgtaggtgctggtcgtgctgacgaagacgatgatgaggttgcagatggt
gattggggtgaggagctggatgtggttgatgttgatggcttacaaaatggagatgtggca
gcaattttggatgatgtggaaggtgcagaagaaaacgaggaagaagggggatgggacctt
gaagatttggagctcccacccgaagctgacactccaaaagtatcagtcacttctcgcaac
tcagtttttgtggccccaactcctggcctgcctgccaacctggtttggacacagagatcg
tcccttgctgcagaacatgctgcagccggtaattttgatacagcaatgcgcttgcttaac
aggcagctaggaattaaaaactttgctcctttgagacccatatttcttgatcttcatgct
gggagtcaaacctatcttcgtgccttttcatctgctcccataatatcattagcagttgaa
agaggattcagtgaatctagtaatgcgaatgcaaaaggatctcctgcacttatttacagt
ttctctcagttggaggagaagcttaaagctggttacaaggccacaacaacagggaagttc
tctgatgctcttcgtctgtttctttctattcttcataccatccctttgatcgtggtcgag
tctaggagagaagtggatgaggtaaaggagttaattattatcgttaaggagtatgttttg
ggtttgcaaatggaattgaagaggagagaactgaagaacaatccagtacgtcagatggag
cttgcagcctattttacgcactgcaaccttcagttgccacatttgaggcttgctctatta
aacgccatgactgtctgttacaaggctaagaacctcgccagtgcggcaaacttcgctcgc
agacttcttgagactaatccctcaattgagaatcaagctaagacagccaggcaagtactg
caggcagcagagaggaacatgacggatgcctcccaactgaactatgatttcagaaaccct
tttgtgacctgtggtgcaacttatgtaccaatttatagaggtcagaaggatgtttcttgc
ccttactgtagttccaggtttgtgccaagtcaggaaggacagctttgctctgtttgtgat
ctagctgttgtcggagcagatgcatctggtttactttgttctcccacccaaaatcgatga
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integrated database retrieval system
