Cucumis sativus (cucumber): 101217103
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Entry
101217103 CDS
T02486
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101217103
Enzymes [BR:
csv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101217103
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101217103
NCBI-ProteinID:
XP_004137574
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All DBs
Position
1:3450351..3452051
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AA seq
350 aa
AA seq
DB search
MNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTL
RYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIII
HGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVT
RGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAH
VANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFEN
GASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccattgacagatgctggagatccaacccatactggagaaaaaacagacaacaa
ctcgccacttgttcagtaggtttcgccggaaaaatgaccaacaacatgggaagaaatctc
atgcactaccaagtcactgacccaagcgatgaccctataaacccacgtccaggtactctc
agatacggcgccacaatgatcaaacacaaagtctggatcacatttaaaaaagacatgcac
attgtgcttcagaagcctcttcttgtcagcagcttcaccgccatcgacggccgaggctcc
accgtccacatcaccggaaacgcctgtctgatggtggtcagagccaccaacattataatc
cacggccttatcatccaccactgcaagtctcaggcggcgggtcaagtcatgggtcccaat
gctaaggtaatttcacttggaaacgtggacggagatgccatccgtttagtaacggcctcg
aaagtttggattgaccacaacacgctgtaccggtgcgaggatgggttgctcgacgtcacc
cgtgggtccactgacataaccatttccaacaattggttccgggaccaagacaaggttatt
cttcttggtcatgatgatggctatgttagagatcggagcatgagagtcactgtcctctat
aaccattttggaccaaattgtaaccaaagaatgcccaggattcgatatgggtatgcacac
gttgcaaacaatttataccaaggttggacgcaatacgcaatcggagggagcatgaacccg
agcgtgaagagtgaagccaaccttttcatcgcatcaaagtcaaaacaagtcatatggagc
acagggaaagtagaggaggcaaaatggaagtttcactcagtgagagacgcatttgaaaac
ggagcatcgtttgcagaaattggagtggggaaaggaagagtaaagccaaattacaatccc
caacagcggtttccagtggcagatgctaagtggatcagagcattgacaagctcatccggg
gcattgcgctgcacatcaaattctaaatgctga
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