Cucumis sativus (cucumber): 101217617
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Entry
101217617 CDS
T02486
Name
(RefSeq) protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101217617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101217617
Membrane trafficking [BR:
csv04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
101217617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
Motif
Other DBs
NCBI-GeneID:
101217617
NCBI-ProteinID:
XP_004149337
UniProt:
A0A0A0L4Z2
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Position
3:complement(3998661..4004192)
Genome browser
AA seq
424 aa
AA seq
DB search
MASDTEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPPGERTKTTNALLVSLM
NQLEKDKKSLNLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ
FGPLQPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDDDLSVPSSTPTSANDVRPGE
PQVSRTQSQSDLSPRVYDKENNDHTNIPPSPQVYDNMNNHTSPPARFHNEVDNQHPPNIP
SYPAAGYPSHEFHIPPPRNEQDNSSYTQPYHHIQSYSQEHQQPPLPHNYPSNETSPNYSY
PHFQSYPSFSESSLPAAPSHYPTYYQGSDASYSSQVTPPPASYPSASQYHSNGREETASE
PQPTSAPAKSYHYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLTNP
SANV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgacaccgagccggcgaagctccttcttccctacctccagcgagccgacgaa
ttgcagaagcatgagcctcttgtcgcatattactgtcgattatatgctatggaacgcgga
ctcaagattccaccgggagagcgtaccaagaccactaatgccctccttgtttccctcatg
aatcagctcgaaaaggataagaagtcactcaaccttgggcctgatgatagtttgcatcta
gagggttttgcattgaacgtctttgcaaaggcagacaaacaagatcatgctggacgagca
gatttgaacactgcaaaaacattttatgctgccagcattttctttgagattatttcccag
tttggtccacttcaaccagatcttgagcaaaaacggaaatatgcagtctggaaagcagcc
gatatcaggaaggctttgaaagagggaaggaagccacagcctggtccaccttctggtgat
gatgatctgtctgttccttcaagtacacctaccagtgcaaatgatgtaagaccaggagaa
cctcaagtctcaagaactcaatcacaatcagatttgtcgcctcgggtttacgataaggag
aataacgatcacacaaatataccaccaagtcctcaggtctatgacaacatgaacaatcac
acatctccacctgcccgattccataatgaagttgacaatcagcaccctccaaacattcca
tcataccctgcagctggttatccatcccatgagttccatatacctcctccgaggaatgaa
caagacaattcctcttacactcagccataccaccacattcaatcctactcacaagagcat
caacaaccgccgttgcctcataattatccatctaatgaaacttctcctaattactcttat
ccccatttccaatcttatccaagtttctctgaaagcagcctcccggccgccccttctcac
tacccaacctattaccaaggatctgatgcttcatactcttcccaagtgactcctcctcca
gccagctacccatcagcttctcaatatcattcaaacggcagagaggagacggcctcagaa
cctcaacctacctcagctccagccaaatcataccactacgacagcaactaccagccagct
cctgagaaaatcgctgaagcacacaaggccgcgaggtttgcagtaggggctctggccttt
gatgatgtttcagttgcggtagagcatttgaagaagtcactggaattgttgactaaccct
tcagccaatgtgtga
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