Cucumis sativus (cucumber): 101219795
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Entry
101219795 CDS
T02486
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101219795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101219795
Membrane trafficking [BR:
csv04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
101219795
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GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
101219795
NCBI-ProteinID:
XP_004139459
UniProt:
A0A0A0LY23
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Position
1:9821678..9839737
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AA seq
960 aa
AA seq
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MAPILSENGVEGDDEREEEEEDDEDDEEEEEIADDEEEPRLKYQRMGGSVPSLLASDAAS
CLAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAVVNDLSFDTEGEYVGSCSDDGSVV
INSLFTDERMRFEYHRPMKAIALDPDYAKKTSRRFAAGGLAGHLYFNSKKWLGFKDQVLH
SGEGPIHAVKWRTSLIAWANDAGVKVYDAANDQRITFIERPRGSPRPELLLPQLVWQDDT
LLVIGWGTSVKIASIRTNHNRAANGTQSSRHVPTSSMNRVDIVASFQTSYLITGMAPFGD
VLVVLAYIPGEEGEKDFSMTAPSRQGNAQRPEVRVVTWNNDELSTDALPVHGFEHYKAKD
YSLAHAPFAGSSYAGGQWAAGVEPLYYIVSPKDIVIAKPRDAEDHIAWLLEHGWHEKALE
AVEAGQGRSELLDEVGSKYLDHLIVERKYAEAALLCPKLLRGSASAWERWVFHFAHLRQL
PVLVPYIPTENPRLRDTAYEVALVALASNSSFHKDLLTTVKTWPPVIYSAVPVISAIEPQ
FNTSSMTDALKEALAELYVIDGQYEKAFLLYADLLKPDIFDFIEKYNLHEAIREKVVQLM
MLDCKRAVQLFIQNKELIPPNEVVSQLFKAGDKCDFRYFLHLYLHSLFEVNPHAGKDFHD
IQVELYADYDTKMLLPFLRSSQHYTLEKAYDICIKKNLLREQVFILGRMGNAKQALAVII
DKLGDIEEAVEFVSMQHDDELWEELIKLCLHKAEMVGMLLEHTVGNLDPLYIVNMVPNGL
EIPRLRDRLVKIITDYRTETSLRHGCNDILKADTVNLLVKYYKEARHGIYLSNEEDEARG
KRNENKVSQSIQKSLNVRMMEVKSKTRGGTRCCICFNPFSIQNISVIVFFCCHAYHETCL
IESTSNLDAMKGTGETGHDLTSDFDYDNGEIEDDEDGEDDTDVGGPRMRCILCTTAASKT
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattctgtcggaaaacggcgtcgaaggagacgacgagagagaggaggaggag
gaggacgatgaggatgacgaagaagaagaagaaattgctgacgacgaggaggagcccagg
ctcaagtatcagagaatgggaggaagcgtaccatctttgctggctagtgatgccgcctcc
tgccttgccgttgccgagcggatgatcgcgcttgggactcacgccggcaccgttcatatt
ctcgactttctcgggaatcaggttaaggagttccctgctcatactgccgtagtcaacgat
ctcagctttgatacagaaggtgaatatgtaggtagttgttcggatgatggttcggtggta
ataaatagtcttttcactgacgagagaatgaggtttgagtatcatcgcccgatgaaggca
attgcattggacccagactacgccaaaaaaacttcaagaagatttgcagcaggtggtcta
gcgggtcacttgtattttaattccaagaaatggctaggattcaaagaccaggtcttgcat
tctggtgaaggcccaatacatgcagtgaaatggagaacaagccttattgcttgggcaaat
gatgcaggcgtaaaggtttatgatgctgcaaatgatcagcgaattacatttattgaaaga
ccgagaggaagcccacgtcctgaacttttgctccctcagttagtttggcaggatgatact
ctgttggtcattggctggggtacatctgtcaagattgcatcaattagaacgaaccataat
agagcagccaatgggacacaaagtagtaggcatgttccaacatctagcatgaaccgggtt
gatatagtggcatcttttcaaaccagctacttaatcacgggaatggctccatttggtgat
gtcctggttgttttggcttatattcctggggaagaaggtgaaaaagattttagtatgact
gctccatcccggcagggaaatgcccaaagaccagaagttcgtgttgtaacatggaacaat
gatgaattatctaccgatgccctacctgtacatggttttgagcattacaaggcaaaggac
tattcccttgcacatgctccttttgcaggcagcagctatgctggtggtcagtgggctgcg
ggtgttgaacctttatactatatcgtatccccaaaagacatagttattgcaaagcccagg
gatgctgaagatcatattgcttggcttcttgaacacggttggcacgaaaaagctttggaa
gcagttgaagcaggtcaaggaagaagtgaactacttgacgaggtaggatccaaatatctt
gatcacttgattgtggagagaaaatatgcggaagctgccttactgtgtcccaaattgttg
cgaggctcagcttctgcttgggagagatgggttttccactttgctcatttgcgtcaactt
cccgtattagttccatacataccaacagagaaccctagattgcgtgatactgcttatgag
gttgctctcgttgctcttgcttcaaactcatcgtttcataaggatttattaacaactgtt
aagacttggccacctgtaatttattctgccgtgcccgttatctcagccatagaacctcag
ttcaatacttcttcaatgactgatgctcttaaagaagcattagctgagctatatgttata
gatgggcagtacgagaaagcttttttgctttatgctgatctgctgaaaccagatatattt
gactttattgagaaatacaatctgcacgaggccattcgtgagaaggttgttcaactcatg
atgctagattgcaagcgtgctgttcaattgtttatccaaaataaggaacttattcctcca
aacgaagttgtttcacagcttttcaaagctggcgataagtgtgatttcagatatttcttg
cacctatatctgcattccttatttgaagtaaatccacatgctggaaaggatttccatgac
attcaggtggaactttatgctgactacgatacaaagatgctgcttccttttcttcgtagt
agtcaacattatacacttgagaaggcatatgatatttgcattaaaaaaaatcttttgagg
gagcaagtctttattcttggaagaatgggaaacgcaaaacaagcccttgctgtcatcatt
gataaattaggagatatagaagaggcagtagagtttgttagcatgcaacatgatgatgag
ctctgggaagaactaataaagctatgtcttcataaggctgaaatggttggcatgttattg
gagcacacagttggcaatctagatcctctttatattgtcaacatggttcctaatggttta
gagatacctcgcctccgggatcggctagttaaaatcattactgattacaggacggagacc
agtcttagacatggatgcaatgatattttgaaggccgacactgtgaatctattagttaag
tactacaaggaggccagacatggaatttacttgagcaatgaagaagatgaagcacgtggg
aagaggaacgaaaataaggtttctcaatcaattcaaaaatctttgaatgttagaatgatg
gaggttaagtcgaaaactcggggaggcactcgatgctgcatatgttttaatccattttca
atacaaaacatttcagtcatcgtattcttttgctgccatgcatatcacgagacttgtctc
atagaatcaacctccaatcttgatgctatgaaagggactggagagactggccacgacttg
acatctgacttcgattatgacaacggagaaatagaagacgatgaagacggtgaggatgat
acagacgtgggcggtcctagaatgcgttgtattttatgtactactgctgcttccaagact
tga
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