Carlito syrichta (Philippine tarsier): 103262339
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Entry
103262339 CDS
T07836
Symbol
SUPT5H
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103262339 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csyr03021
]
103262339 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103262339 (SUPT5H)
Transcription machinery [BR:
csyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103262339 (SUPT5H)
RNA polymerase I system
103262339 (SUPT5H)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
103262339 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
DUF150_C
Motif
Other DBs
NCBI-GeneID:
103262339
NCBI-ProteinID:
XP_021568992
Ensembl:
ENSTSYG00000010636
UniProt:
A0A3Q0E276
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQVTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPETMGVIVRLERETFQVLNMHGKVVTVRHQAVTRKKDNRFASALDSEQNNIHVKDIV
KVIDGPHSDREGEIRYLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGLKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSQRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttctcggaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtagaggaagaacggcggagtgcagcgggcagtgagaaggaagag
gaacctgaggaagaagaggaggaggaagaggaggaagaatacgatgaggaagaggaagag
gaagatgatgatcggccccccaagaaaccccgtcatggtggcttcattctggatgaggct
gatgtggacgatgagtatgaggatgaggaccagtgggaggacggagcagaggacatccta
gagaaagaagagattgaagcttccaatattgataatgttgtcctggacgaagaccgttct
ggggctcgccgccttcaaaatctctggagggaccaacgagaagaagaactgggagagtat
tacatgaagaaatatgccaagtcatctgtgggagagacggtatatggaggctctgatgag
ctctcagatgacatcacccagcagcagctgctcccaggagtcaaagatcccaacctgtgg
actgtcaaatgtaagattggggaggaacgggccacagccatttcattgatgcgcaagttc
attgcctaccaagtcacagacacgcctctgcagattaagtcagtggtggcaccagagcac
gtgaagggctacatttacgtggaggcctacaagcagacccatgtgaagcaggccatcgag
ggcgtgggaaacctgcggcttggctactggaaccagcagatggtgcccatcaaggaaatg
acagacgtgctcaaagtggtgaaggaggtggccaacctgaaaccaaagtcctgggtccgc
ctcaagcggggcatctacaaggatgacatcgctcaggtagattatgtggagcccagccaa
aacaccatctccctgaagatgatcccacgcattgactacgaccgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccacagaggctgttt
gatgctgagaagatcaggtccctggggggtgatgttgcctctgatggtgacttcctcatc
tttgaggggaaccgttacagccggaagggctttctgttcaagagcttcgccatgtctgct
gtgatcacagagggtgtgaagcctacactctctgagctggagaagtttgaggaccagcca
gagggcatcgacctggaggtggtgactgagagcacagggaaggaacgggaacataacttc
caacctggggacaacgtggaggtctgtgagggtgagctcatcaacctgcagggcaagatc
ctcagtgtagacggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctggagttcccggcccaggaacttcggaaatacttcaagatgggggaccacgtgaaggtg
attgctggccgattcgagggtgacacaggccttatcgtgcgggtggaggagaacttcgtc
atcctcttctctgacctcaccatgcatgagctgaaggtgctcccccgggacctgcagctc
tgctcggagacggcatcaggtgtggatgttgggggccagcatgaatggggtgagctggtg
cagttggaccctgagaccatgggtgtcatcgtgcgactagagcgggagaccttccaggtg
ctgaacatgcatgggaaggtcgtgactgtcaggcatcaggctgtaacccggaagaaggac
aaccgctttgcttcggccctggactcagaacagaacaacattcatgtgaaagacatcgtc
aaggtcattgacggcccccactcagaccgggaaggggagattcgctatctcttccgcagc
ttcgccttcctgcattgtaagaaactggtggagaatggaggcatgtttgtctgcaagacc
cgccacctggtgctggctgggggcttgaagccccgagatgtgaccaacttcaccgtgggt
ggctttgctcctatgagcccccggatcagcagtcccatgcaccccagtgctggaggtcag
cggggtggctttggtagcccaggtggcggcggtggcggcatgagcaggggccgggggcgg
agagacaacgagctgattggccagactgtgcgcatctcccaggggccctacaaaggctac
atcggcgtggtgaaggatgccacggagtctactgcccgcgtggaactgcactccacctgc
cagaccatctctgtggaccgtcagcggctcaccacagtgggttcacagcgcccaggtggc
atgacctcaacctatgggcggacacccatgtacggctcccagacacccatgtatggctcc
ggctctcgcacacccatgtacggctcacagacacctctccaggatggcagccgcacccca
cactacggctcgcagacgcccctgcatgacggcagccgcacccctgcccagagcggggcc
tgggaccccaacaaccccaacacgccctcacgggctgaggaagaatatgagtatgccttt
gatgatgagcctaccccatcaccgcaggcctatgggggcacccccaatccccaaacacct
ggctacccagacccatcatccccacaggtcaacccacagtacaacccgcagacgccaggg
acaccagccatgtacaacacagaccagttctccccctatgctgctccctccccgcaaggc
tcctaccagcccagccccagcccccagagctaccaccaggtggcaccaagcccagcaggc
taccagaacacccactctccggccagctaccaccccacaccttcacccatggcctatcag
gctagccccagcccgagccctgttggctacagtccgatgacacctggagccccctcccct
ggtggctacaacccacacacaccaggctcaggcattgagcagaactccagtgactgggta
accactgacatccaggtgaaggtgcgggacacctacctggatacacaggtggtaggacag
acaggtgtcatccgcagcgtcacgggaggcatgtgctccgtgtacctgaaagacagtgag
aaggttgtcagcatctccagtgagcacctggagcccatcacccccaccaagaacaacaag
gtgaaagtgatcctgggtgaggaccgggaagccacaggtgtcctgctgagcatcgatggc
gaggatggcatcgtccgcatggaccttgatgagcagctcaagatcctcaacctccgcttc
ctggggaagctcctggaagcctaa
DBGET
integrated database retrieval system
