Carlito syrichta (Philippine tarsier): 103265766
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Entry
103265766 CDS
T07836
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03030
DNA replication
csyr03420
Nucleotide excision repair
csyr03430
Mismatch repair
csyr03440
Homologous recombination
csyr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103265766 (RPA1)
03420 Nucleotide excision repair
103265766 (RPA1)
03430 Mismatch repair
103265766 (RPA1)
03440 Homologous recombination
103265766 (RPA1)
03460 Fanconi anemia pathway
103265766 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csyr03000
]
103265766 (RPA1)
03032 DNA replication proteins [BR:
csyr03032
]
103265766 (RPA1)
03400 DNA repair and recombination proteins [BR:
csyr03400
]
103265766 (RPA1)
Transcription factors [BR:
csyr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103265766 (RPA1)
DNA replication proteins [BR:
csyr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103265766 (RPA1)
DNA repair and recombination proteins [BR:
csyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103265766 (RPA1)
MMR (mismatch excision repair)
103265766 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
103265766 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
103265766
NCBI-ProteinID:
XP_008061605
Ensembl:
ENSTSYG00000003482
UniProt:
A0A1U7TUU9
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MVGQLSEGAIAAIMQQGETSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEKEQLSSNCICQIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
GHGQQQVVTSPVPAASPAASNKPQQQNGSLGMVSTVSKAFGASKTFGKAGGTCLSITSGA
TQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFN
EQVDKFFPLIDVNKVYYFSKGTLKIANKQFTAIKNDYEMTFNNETSVMPCDDAHHLPTVQ
FDFTGIDDLENKPKDSFVDIIGICKSYEDATKITVKSNNREVAKRNIYLMDTSGKVVTAT
LWGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEG
QALDGVSISDLKSGGITGSNTNWKTLYEVKSENLGQGDKPDYFSAVATVVYLRKENSMYQ
ACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADFQENQWVTCFQESAEAI
LGQNTAYLGELKEKNEQAFEEVFQNANFRSFVFRVRVKLETYNDESRIKATVMDAKPVDY
REYGRRLIMNIRRNALM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccagttgagcgagggggccattgcggccataatgcaacagggagaaacatcc
ataaaacccatcctccaagtcattaacatccgtcccattaccacagggaatagtccacct
cgctatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagctgaaccctcttgttgaaaaagaacaattgtccagcaactgtatttgccagattcac
cggtttattgttaacactctgaaagatggaaggagagtagttatcttgatggagttagaa
gttctaaaatcagctgaagcagttggagtaaagattggcaatccagtgccctataatgaa
ggacatggacagcagcaagtagttacttctccagtcccagcagccagtccagcagccagc
aacaagccccagcaacagaatgggagcttgggaatggtttccactgtttctaaggctttt
ggtgcctcgaagacatttggaaaagctggaggtacctgtctgtcaatcacttctggggca
acacagtccaaagtggtacccattgccagcctcaccccttaccagtccaagtggactatt
tgtgctcgtgttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaaggg
aagcttttctctttagaactagttgatgaaagtggagaaatcagagctacagctttcaat
gagcaagtggacaagttctttccccttattgacgttaacaaggtgtattatttctcaaaa
ggcaccttgaagattgctaacaaacaattcacagctattaaaaatgactatgagatgacc
ttcaataatgagacttctgtcatgccctgtgatgatgctcaccatttacctactgttcag
tttgatttcaccgggatcgatgacctagagaacaagcctaaagactcatttgtagacata
atcgggatctgcaagagctatgaagatgccactaaaatcacagtgaagtctaacaacaga
gaggttgctaagcggaatatctatttgatggacacatcgggaaaagtggtgactgctact
ctgtggggggaagatgctgataggtttgatggttctagacaacccgtgatggctatcaaa
ggagccagagtttctgattttggtggacgtagcctctctgtactgtcttcaagcactgtc
attgtgaatcctgacatcccagaggcctataagcttcgtggatggtttgactcagaagga
caagccttggatggtgtttccatctctgatctaaagagtggaggaataacagggagcaac
accaactggaaaactttatatgaggttaaatcagagaatctgggccaaggggacaagccg
gactattttagcgctgtggcaacagtggtgtatcttcgcaaagagaactctatgtaccag
gcctgcccgactcaggactgcaataagaaagtaattgatcagcagaatggattataccgc
tgtgagaagtgtgaccgtgaatttcccaatttcaagtaccgcatgatactgtcagtaaat
attgcagattttcaagagaatcagtgggtgacttgtttccaggagtctgccgaagctatc
ctcggacaaaacactgcttatcttggggaactaaaagagaagaatgaacaagcatttgag
gaagttttccagaatgccaactttcgatcctttgtattcagagtcagagtcaagctagag
acctacaatgatgagtctcgaattaaggccactgtgatggacgcgaagcccgtggactac
agagaatatggcagaaggctgatcatgaacatcaggagaaatgcactaatgtga
DBGET
integrated database retrieval system
