Comamonas terrigena: CT3_01860
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Entry
CT3_01860 CDS
T09012
Symbol
xth-1
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ctez
Comamonas terrigena
Pathway
ctez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CT3_01860 (xth-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctez03400
]
CT3_01860 (xth-1)
Enzymes [BR:
ctez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CT3_01860 (xth-1)
DNA repair and recombination proteins [BR:
ctez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CT3_01860 (xth-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BBL22731
LinkDB
All DBs
Position
complement(223252..224070)
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AA seq
272 aa
AA seq
DB search
MDSSLFKLTSLNLNGIRSATSKGVEAWVAATGPDCICVQEIKAQAPDIQDRFEQLAGLDG
YFHFAEKKGYSGVGVYTRHAPSDVIVGLGSPEFDAEGRYVEARFDTAGRKLSIISAYFPS
GSSGEDRQQAKFRFLAEMHIHLMRMKGEREFILCGDINIAHRKEDLKNWRGNQKNSGFTP
EERAWMDMLLDPVAPTGGIVDVYRVLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATP
ALAALARQESIYKGEKFSDHAPITIGYDLKLG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggattcttccttattcaaattaaccagcctcaacctcaacggcatccgctccgccacg
tccaaaggggtggaggcctgggttgctgcgaccggtccggattgtatttgcgtacaggaa
atcaaggcacaggcgcctgatattcaagaccgtttcgaacagctggccggactggatggc
tatttccactttgccgaaaagaagggctattccggtgtgggcgtctacacccgccatgcg
ccatcggatgtgatcgtcggcctgggctcgcccgagttcgacgccgaaggccgctacgtg
gaggcgcgtttcgacaccgcaggccgcaagctgtccatcatcagcgcctactttcccagc
ggcagctccggcgaagaccgccagcaggccaaattccgtttcctggccgaaatgcacatc
cacctgatgcgcatgaagggcgagcgcgaattcatcctgtgcggcgacatcaacatcgcc
caccgcaaggaagatctgaagaactggcgcggcaaccagaagaacagcggcttcacgccc
gaagaacgcgcctggatggacatgctgctggacccggtggcgccgaccggaggcatcgtt
gacgtctaccgcgtgctccaacccgacaccaccgacgcctgctacacatggtggagcaac
cggggacaggcctacgcgaacaacgtggggtggcggctggactatcacctggccaccccc
gcactggcggcactggcgcgccaggagtcaatctacaagggcgagaagttcagcgaccac
gcgcccatcaccatcggatacgacctgaagctgggctga
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