Thermochaetoides thermophila: CTHT_0004840
Help
Entry
CTHT_0004840 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cthr01009
]
CTHT_0004840
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0004840
04131 Membrane trafficking [BR:
cthr04131
]
CTHT_0004840
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0004840
Enzymes [BR:
cthr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CTHT_0004840
Protein phosphatases and associated proteins [BR:
cthr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CTHT_0004840
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CTHT_0004840
Membrane trafficking [BR:
cthr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CTHT_0004840
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
CTHT_0004840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arb2
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
18254522
NCBI-ProteinID:
XP_006691023
UniProt:
G0RXZ5
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MDAHDDVIMDGEDHRMTDGPLASNGFRDATTGESSLETTNVQSTAGTSKGEEEEEEEGGS
SSQLVYPEHFRRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEHIMQTFKKAGLV
FTGSDAELARIIKTEPTKYMWRIPARPATKEEICMVHHPRHYLWVEELSRKSTQELRHLS
AIMDQGRDSLYVGSMTYEASLISAGGAIETCKSVVTGVVKNAFAIIRPPGHHAEYDQPMG
FCLFNNVPIAAKICQADYPDLCRKILILDWDVHHGNGIQNLFYDDPNILYISLHVYRNGE
FYPGKPDNPMTPDGGIEHCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFNP
DLVIISAGFDAAAGDELGACFVTPACYAHMTHMLMSLAGGKVAVCLEGGYDLEAISKSAL
AVAQTLMGEPPPKMEIPKISREAAKVLAKVQAYHAPYWECMRPGVVDVQELQLQDSSRLH
DVVRRAQRQVLSEKHGMLPLYIQRDVLYKSFENQVLVTRGISEARRLLVIVHDPPELHAQ
PDPLDNRVEPHNAWVTDGVLRYIDWAISKDFAVMDINVPHYITHPEDTDAYTPRADERTL
QAQIQDLMCYIWDNYLQLYDCVEDIFLMGVGNAYLGIKMLLIYRPDVKRRVSGVVNFVNG
ALRPVKSDVDTELSQWYKNNSQVYVTNDHACWADADLARKVLKRRFGNVIRSEAKGLSAM
MATHFQDVQQFILERMTPPEEVGETTEEEKA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccacgacgacgtcatcatggacggcgaggaccatcgcatgaccgatgggccc
ttggcctccaatggcttcagggacgcgacgacgggcgagagctcgctggagacgaccaac
gtccagagcacagcgggcacgtccaagggcgaggaggaggaggaggaggagggcggcagt
tctagccagctcgtgtacccagagcacttccgtcgtcgcgggctactccccacagggtgc
tgctatgatgatcgcatgaagctgcatgccaacgccgactttgggcctaatccgcaccat
ccggaagatccttcgcgcatcgagcacatcatgcagacctttaagaaggccgggcttgtc
tttaccgggtcggatgccgagctggcacgtattatcaaaactgagccgacgaagtacatg
tggaggattcctgcacgaccggctaccaaggaggagatctgcatggttcaccacccgaga
cactatctctgggtcgaggagctgtcgcgcaagtctacccaagagctgcgccatctctct
gccatcatggaccaaggtcgcgattcgctttacgtcgggagcatgacctacgaagcatcc
ctcatctcagctggcggcgcgatcgagacgtgcaagagcgtggtcactggcgtagtgaag
aacgccttcgccattatccggcccccaggtcaccacgccgagtatgaccagcccatgggc
ttctgcctcttcaacaacgtcccaattgccgccaaaatttgccaggccgactatccggac
ctctgccgcaagattcttatcctggactgggacgtccaccacggcaacggcatccaaaac
ctcttctacgacgaccccaacatcctctacatctcgcttcacgtctaccgcaacggcgag
ttctatcccggtaagcccgacaacccgatgacgccagacggagggatcgagcattgcggt
gcggggcccggcctgggcaagaacgtcaacatcggctggcatgaccagggtatgggtgac
ggcgagtacatggcggctttccagaagatcgtcatgcccatcgcgcacgagttcaacccc
gacttggtgatcatctcggccggttttgatgccgccgcgggcgatgagctcggcgcctgc
tttgtgactcctgcatgctacgcccacatgacgcatatgttgatgtcccttgcgggagga
aaggttgcggtgtgcctagagggcgggtacgatcttgaagcaatctcgaaatcagcgctg
gccgttgcccagacgctcatgggcgaaccgccgccgaagatggagatccccaagatcagt
cgcgaggcggccaaggtgttggccaaggtgcaggcgtatcatgcgccatattgggagtgc
atgcggcccggcgtggtggatgtccaggagctgcagctacaggattcgtcgaggctgcat
gatgtagtcaggcgtgcgcagcggcaggtgctgagtgagaagcatgggatgctgccgttg
tatatccagcgggatgtgctgtataagtcgtttgagaaccaggtgctggtgacgagaggc
atttcggaggcgaggagattgttggttattgtgcatgatcctccggaacttcatgcgcag
cctgatccacttgataaccgtgttgagccgcacaatgcttgggtgaccgatggcgtcctc
cgctacatcgactgggccatcagcaaggactttgccgtcatggacatcaatgtaccgcac
tacatcacgcatcctgaggacaccgatgcctacaccccgcgcgctgacgagcgcacgctg
caagcccagatccaggacctcatgtgctacatctgggacaactacctccagctgtatgac
tgcgtcgaagacatcttcctcatgggcgtgggcaacgcctatctcggtattaagatgctc
ctgatttataggccggacgtcaaacgccgcgtctccggcgtagtcaacttcgtgaacggc
gccctccgccccgtcaagtcggacgtcgacacggagctgtcccaatggtataagaacaac
tcgcaggtctatgtcacgaacgaccatgcctgctgggccgacgccgacctggcacgcaaa
gtcctcaagcgtcgtttcggcaacgtcattcgtagcgaggctaagggcctctcagcgatg
atggcgacacacttccaggacgtacagcagtttattctggagaggatgacgccgcctgag
gaggtgggtgagaccactgaggaggagaaggcttga
DBGET
integrated database retrieval system
