Thermochaetoides thermophila: CTHT_0020230
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Entry
CTHT_0020230 CDS
T03100
Name
(RefSeq) putative sit4-associating protein
KO
K15458
SIT4-associating protein SAP185/190
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cthr03016
]
CTHT_0020230
Transfer RNA biogenesis [BR:
cthr03016
]
Eukaryotic type
tRNA modification factors
Elongator related proteins
CTHT_0020230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAPS
Motif
Other DBs
NCBI-GeneID:
18256061
NCBI-ProteinID:
XP_006692501
UniProt:
G0S399
LinkDB
All DBs
Position
Unknown
AA seq
1412 aa
AA seq
DB search
MFWRFGGYANVSTIDTILEKDNFQLEELLDETDLIQELKQHNAKLIEYLREPKVLEKLLQ
YVVAPKLEPVASQDDNDETEDEDEIKGKGLSLSFNSSTSTCDDAEKKRNRYAFVAAEILS
ADVWSLYEALLESRDLLVNFWQFLTRPSPLDPLQASYFTKVNESLFDKKTAEMIDLLKSM
DGAVANLLRHVDCPMIMDLLLKIISLERNEAGQGIVEWLYSQDLMPTLISFLGPEHPWST
QTSAADFIKAIITVSANASQNEQACIGPNELTRQLVSRPCVEQLIKYMLGGGNPLTCGVG
IVIEVIRKNNSDYDPEGVDIHAPPTSKDPIYLGTLLRLFAEHIPDFMNLIMTAPAQEHRL
NSTFGDRIEPLGFDRFKTCELMAELLHCSNMVLLNEPGSEEFIAARDAERHRLRAEGKLM
PTPGAAGPMRRENLSLQASQLSAADENRKLEVTNSSVEDDGFEEVSHAAEEEITHGVLEL
PDAPLPTGSSLLDKDDDDFVDEPLSSPRLKYSEPVRSDDQSPFEDPDLVVPPLSPKKQTE
QDSSSGKTPGPSGTKEEEKERPTTMVEPSPAKPVEEKPPPKTEEIAKEDTPSQPSETAAE
TTAASQTASEGDSTLEQSRDTIDESVNTSIVIANITEAPNPVETTPPPAKPVVGDFLKMQ
LVKYNVVPTILSFFFKYPWNNFLHNVVYDIVQQVFNGPMDRGYNPTLATSLFEQADITTQ
IINGQKASEKSEAEIKTRQGYMGHLTLIAEEVVKFTERHPPELLSETVLNKVMAPEWVQY
VEGPLAETRERDNAILGGVRPEAVMARGSASLMGFAGLSSIGLSASASNALAEAGLNGGL
DSGEGSGSLGAFSISAGTLMSGFGSSSDEDDDEEQETEEDVNNEARSLTALDEAVRNGNG
FGAIGDGRPHVHASWSYAEAPHSTEGDDVMDLDEAVPALEDFQRDGTVQSGASAAADDLG
FDFVEPWDASRLCSYSVELLAKGWFRAYTNSLNSDNSNSLNPPSIPPPPPPPPPLNIPPS
RARLQLAARLAMNKRNAEAAAQANEAQSTTNGDPDSSLLHEDDDDDPGFGLPSSERISNP
FEDYEEEDEDEEDVEDNSSDDGDPSAAAAGNNNVSSSSGLGWNRGSWWRNVVRRGARRFE
ADDDDDDDGLGLGRVEKFGDGRDDSSSSDDDARPSGGGFGTSGGFDDAFEDEEFGDFAMP
EVDAATKAAAGSGSASGATAAGGTIGSGTGFSGIDPERETILVKPTPVHAKSGIGPFSSF
WPFSTPKFGLGEDKEKEKEATPAFEKEGATSAEEAHTGTTAVTFPSTTTTVTKSATPSST
GTLADEPVELAKEEAEPEPGTDAEVVEVELVLDDRDRIPIAATIPAPSTADVSKEQKEER
MVFSHHRKKDSVDGDGEGEEIIIHPPVGEGLR
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgttctggcggtttggcggttacgccaatgtctcgactatcgataccatcctcgagaag
gacaacttccagctcgaagaactgctcgatgagaccgacctaattcaggaacttaagcag
cataatgccaagttgattgagtacctccgagagcccaaggtgctagagaagctcctgcag
tatgttgtagctccaaagctcgagcccgtcgcctcgcaggacgacaacgacgagaccgaa
gatgaggacgaaatcaagggcaagggcctctcgctctcattcaactcatctacctcgacc
tgcgacgatgctgagaagaagcgtaatcgctatgcttttgttgccgccgagatcttgtca
gccgacgtctggtcactctatgaggcccttctggaaagcagggacctgctcgtcaacttt
tggcagttcctgacgaggccatcgccgcttgatccactgcaggcgagctacttcaccaaa
gtcaacgagtccctcttcgacaagaagacagcggagatgatcgatctgttaaagtcgatg
gatggcgctgtggccaacctccttcgacatgtggactgccccatgatcatggacctgttg
cttaagatcatcagcctcgaaagaaatgaggcaggccagggaattgtcgaatggttatac
agccaagatctcatgccaaccctgatctcatttcttgggcctgaacatccctggtcgact
caaacttctgctgccgactttatcaaagccattattactgtgtcggccaatgcgtctcag
aacgagcaggcttgcatcggtcccaatgagctcacgcgccaactcgtatccagaccatgt
gtcgagcagctcatcaagtatatgctcggtggcggtaacccgctaacttgtggtgttggc
atcgttatcgaagttatcaggaagaacaactcggattatgatcccgagggcgtcgatatt
catgcacctcccacgagcaaggaccccatctacctaggcactctgcttcgccttttcgcc
gagcatatccctgattttatgaacctcataatgaccgcccctgcccaagagcatcgcctc
aactctacctttggcgatcgcatcgagcccctcggctttgacaggttcaagacatgcgag
ctcatggccgaacttttacactgcagcaacatggtgctgcttaatgagcctggctctgag
gagtttattgccgcccgagatgccgaacggcacaggctacgggccgagggcaagttgatg
cctactcctggagcagctggccctatgcggagagagaatctgtccttgcaggcgtcacag
ctgtcggctgcagacgagaaccgcaagctggaggtcacgaacagctcggttgaggacgat
ggattcgaggaggtgtctcatgctgccgaggaggagatcacccacggtgttttggagttg
cctgatgcgccgctgcctacggggtcgagtttgctcgataaggacgacgacgactttgtt
gatgaacctctaagctcgccgaggcttaaatatagcgagcctgttaggtcggacgaccag
tcaccatttgaggatcctgatttggtggttcccccgctttcgccaaagaagcagaccgag
caggacagctcctctggcaagacgcctgggccatcagggacgaaggaggaagaaaaggaa
cgacctacaaccatggtcgaacctagtcccgccaagccggtcgaagagaaacctccgccc
aagacagaagagatagcaaaggaggatactccgtcccaaccaagtgaaacggccgcagag
acgacagctgccagccagacagcttcagagggtgactccacacttgagcagtcccgagac
accatcgacgagtcagtcaatacttcgattgtcatcgcaaatattactgaggcgccgaat
cccgtcgagactacaccccctccggccaagccagttgtcggtgacttcctcaagatgcag
ctcgtcaagtacaatgttgtccctactatcctcagcttctttttcaagtacccgtggaac
aacttcttgcacaatgtggtttacgacattgtgcagcaagttttcaacggccccatggac
cgtggctacaatccgacccttgctaccagcctttttgagcaggcggacatcacaacacaa
atcatcaatgggcagaaggccagcgagaaatctgaagccgagatcaagactcgccaaggc
tacatgggccatctgaccctcattgcagaagaagtggtcaagttcacagagcgtcacccg
ccggagctgctcagcgagactgtgctcaacaaggttatggcgcctgaatgggttcagtac
gttgagggcccacttgctgagacccgtgaacgcgacaatgccatcctgggcggcgtccgg
cctgaagccgtgatggctcgtggcagtgctagcctgatgggttttgccggcctgagctca
atcggtctaagtgcaagcgcctcgaatgcccttgccgaggctggcttgaatggcggcctg
gactcgggtgaagggtctggtagtcttggtgccttctccatcagcgccgggactctcatg
agcggattcggaagcagtagtgatgaagacgacgacgaagagcaggaaactgaggaggat
gtcaacaacgaggcacgcagccttactgcgctggatgaggccgtgagaaatgggaatggg
tttggcgctattggcgatggcagaccacatgtacatgcttcgtggtcgtatgctgaggcg
ccgcacagtaccgagggggatgatgtgatggatctagatgaggcagtgccggcattggag
gacttccagagagatggcaccgttcagagtggtgcttctgcggctgctgacgatctcggc
ttcgattttgtcgagccgtgggacgcgtccaggctgtgctcttacagcgttgagctcctg
gccaagggctggttccgggcctacaccaactccctcaacagcgacaacagcaactctctt
aaccctccctctattcccccgccccctccccctcccccgccactcaacatccctccgtct
cgtgcgcgcttacagctagctgcccgtcttgctatgaacaagcgcaatgccgaggcggct
gctcaagccaacgaagctcagtccacaaccaatggtgatccagacagcagcctgctccac
gaagatgacgatgacgaccctggctttggcctgcctagcagcgaaaggatttctaaccca
tttgaggattatgaagaggaagacgaagacgaggaagatgtggaggataattccagtgat
gatggcgatccctccgccgcagctgccggaaacaacaatgtgagcagcagctctggtctt
ggctggaaccgtgggtcgtggtggcgtaacgttgtccgtcgtggtgccagaaggttcgaa
gctgatgatgatgacgacgatgatggcttggggctgggtcgggtcgagaagtttggtgat
ggccgagatgactcgtccagtagtgatgacgatgctcgtccttcgggcggcggtttcggc
actagtggaggatttgatgatgcctttgaggatgaggagtttggcgactttgccatgccg
gaggttgatgcggctacaaaggcagctgctggctcaggctctgcaagtggtgccactgcc
gccggcgggacgataggctcgggaacgggattctctgggattgatcccgagagagaaact
atccttgttaaaccgacacctgttcatgcgaagtcagggattggcccgttcagcagcttc
tggcccttctccactccgaagtttggtctcggtgaggataaggaaaaggaaaaggaggca
actccggcgtttgagaaggagggtgcaacttcggctgaagaagctcacaccggtacaacg
gccgtcacattcccctcaaccactaccacggtgacaaagtctgctacaccatcctcgaca
ggtacgctagctgatgaaccagtcgaattggccaaagaagaggctgagccggagccaggc
acggatgctgaggtggtcgaggtcgaactagtgttggatgatcgcgaccggattccgata
gcagccactatccctgcgccttcgactgctgatgtcagcaaggagcagaaagaagagagg
atggtattttcacatcatcggaagaaggatagtgttgatggtgatggcgaaggcgaggag
atcatcattcacccgcctgttggcgagggtctgcgttga
DBGET
integrated database retrieval system
