Crotalus tigris (Tiger rattlesnake): 120299102
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Entry
120299102 CDS
T08476
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain isoform X1
KO
K16630
collagen type XXII alpha
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
120299102
NCBI-ProteinID:
XP_039179481
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MLWRNRDLLSPFRRWTLLCWTEMSMNVAVLLAAFFSLLSGASPVSIAGCKNVHYDLIFLL
DTSSSVGKEDFEKVRQWIAHLVDTFEIGPDKTRVGVVRYSDHPTTEFDLGSYGTQREIKE
AAKGIKYLGGNTNTGDALRYINSYSFSAQAGGRPYDDAIKKVAILLTDGRSQDYVLSPAS
AAHRAGIRIFAVGVGDALKEELDEIASEPKSAHIFHVSDYNAIDKIREKLRRRLCENVLC
PNVHVEGDRFKHSNGEMDDIPGFDLMELFSVREIFRMKDNGIQSSYVRLGTSPIVQRTQD
VFPQGLPDEYGFVATFKFRKSSRREDWYIWQIIDKYGIPQVSIRLDGENKALEYNAVGLT
RDAVRVVFKNGPVNDLFDRNWHKIALSIQSQTVSLYINCKLVQTLPIEDRENIDIQGKTV
IGKRLYDSVPIDFDLQRMVIYCDSRHAEFETCCDISPGPDCQVTVVTDVPTPVIPSTVPN
EQIGPTKTVNCSCTPGEKGERGLPGFEGLRGQKGDIGPIGPPGPKGDKGESGGETFGRGE
KGQKGEKGPQGLPGLMGERGERGSIGASGIPGNDGAKGETGEPGLPGASGLPGPSGPKGE
EGRLGPPGRQGYVGAPGLQGERGEKGPRGDKGERGLDGFPGKPGLDGKQGAKGSPGQPGP
VGPQGEKGEIGSPGKPGSAIEGLKGDQGAPGPRGPMGPPGNPGVSGPPGPEGKMGSPGLQ
GLRGKKGEAGLPGVDGLSGPAGPPGPPGLAGSPGLAGSPGQPGEAGRNGERGPPGLPGKS
GQDGLPGLPGSKGEQGEKGEAGEAGSKGESGPPGPAGIVGERGEAGLPGQSGLPGPRGEK
GNQGEKGRAGLTGFKGERGEKGEIGAPGLPGPPGKVTSFTPRPSIPGEQGPKGEKGDRGE
RGEPGERGVPGKQGPIGPVGSEGLKGQEGEVGHPGPPGEMGVPGPAGPPGPRGLPGNVGI
PGATGQPGTDGQKGEKGEPGKEGKLGPPGPTGEPGAVGGPGLPGKGRDGERGERGPPGLP
GPFGQKGDRGAPGVPGQPGDRGTPGVGLSGPLGPVGPPGEKGPPGSRGLPGIQGPPGLTG
QDGLPGNPGERGPPGKPGSPPILTPDDIRLFVKDICTDCPPGPSGLPGMPGQKGDKGLRG
SPGNDGPVGKRGEPGLRGPPGPPGGEGPKGSKGEDGASGEAGLKGEQGHPGMPGFMGPPG
NPGPAGAEGSPGPVGSPGPPGEMGKEGLPGPQGPPGLPGLMGVAGNDGKDGKPGSPGEPG
KPGDPGLPGQEGARGPPGFKGPRGDAGSPGMRGEPGQPGTPGREGQSGKDGDPGPVGPEG
PRGLRGIAGKTGPPGATGESGPAGNPGSKGSKGETGSPGVPGFIGPRGLRGEAGEKGVPG
KEGTPGSPGEHGQKGDRGDPGGKGEKGPAGVKGPPGDPGVPGRKGHTGLMGPPGPSGESG
QVGPPGSPGQPGFPGPRGDPPSTETLRRLIQEELVKQLDARLPYLISQLQPSQIKAPQGR
PGPPGSPGAEGPPGRVGPPGQPGRPGQPGSEGPSGPMGPKGDGGEKGEKGDPGIGQRGET
GPPGVAGIPGEPGYGKDGLPGAQGPQGEAGTPGLMGPPGPPGANGQCDPSQCAYYASLAA
RPSNIKGP
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgctttggagaaacagagatttgctaagtcctttccgcaggtggactctactatgttgg
acagaaatgtctatgaatgttgctgttctcctggctgcctttttctctcttctctcagga
gcttctcccgtttccattgcaggttgtaagaacgtccactatgacctgatcttcctgctg
gacacttcctccagcgtgggcaaagaagactttgagaaggtccgccagtggatagctcac
ctggtggatacgtttgagattggaccagacaaaacccgtgttggggtcgtccggtacagc
gatcacccaactactgagtttgaccttgggagttacgggactcaacgcgagatcaaagaa
gctgcaaagggcatcaaataccttggggggaacacaaacactggagatgccctgcggtac
atcaatagttacagcttttccgcacaggccggcgggaggccatacgatgatgccatcaag
aaagtagcgatcctcttgacggacggcaggagccaggattacgtcttgagtccggcctca
gcagcacatcgagctggcatccggatttttgcggtgggcgtcggagatgcccttaaggaa
gaattggatgaaattgcttctgagccaaaatcggcccacatcttccacgtttctgattac
aacgctattgataagatacgggagaagctgagaagaaggctttgcgagaatgtcctgtgt
ccaaatgttcacgtagaaggagaccggttcaaacactccaatggagaaatggatgacata
ccagggtttgacttgatggaattatttagcgtgcgggagatattccgaatgaaagacaat
ggaattcagagctcttatgttcgtcttggaacctcccccattgttcagcgaacacaagat
gtctttccacaaggacttccagatgagtatggttttgtcgccactttcaagttccgcaag
tcatccaggcgagaagattggtacatttggcagatcattgacaaatatggcataccacag
gtttccattcggttagatggggagaacaaagccttggagtacaatgcagttggactcacc
agagatgctgtgagagtggtcttcaaaaacggacctgtcaatgacctgtttgatcgtaac
tggcataagattgccctgagcatccagtctcagacggtctccttatacatcaattgcaaa
ctggtccagacattacctattgaagacagagaaaatattgacatccaagggaaaacagtg
attggcaaacgcctttatgacagtgtgccaattgattttgaccttcagcggatggttatt
tattgtgattcacgacacgctgagtttgaaacctgctgtgatatttctcctggacctgat
tgtcaagtgacagttgttaccgatgttcccactccggtaattccatcgactgtcccaaat
gagcagattggacctaccaagacagtcaattgttcctgtactccaggagaaaagggggag
agaggccttcctggatttgaaggactgagaggacaaaagggagacattggaccaattgga
cctcctggcccaaagggagacaaaggagaatcaggtggggaaacatttggacgaggagaa
aaaggacaaaagggtgaaaagggaccccaaggtttacctggtctaatgggtgagagagga
gaacggggttccattggtgcatccggcatcccaggaaacgatggagccaaaggagaaact
ggagaacctggtcttcctggagcatctggccttcctggaccatctggcccaaagggagaa
gaagggcgtctaggtcccccaggtcgtcaaggttatgttggagcacctggtttgcaaggg
gaaaggggagaaaaaggaccccgtggtgacaagggagaacgtggccttgacggttttcct
gggaagcctggcttggatggaaaacagggtgccaaaggaagtccaggtcaacctggacct
gtaggaccacaaggagaaaagggtgaaattggatctcctggaaaaccaggctcagcaatt
gaaggcttgaaaggagaccaaggagctcctggcccacggggacccatggggcctccggga
aatcctggtgtttcaggaccacctggaccagaaggcaagatgggatctccaggtctacaa
ggtctacggggcaagaaaggagaagcaggtctccctggagttgatggattatctgggcct
gctggtcccccaggacctcctggacttgctggttctcctggacttgctggatctccaggt
caacctggagaagctggcagaaatggtgaacgagggccgccgggtttacctggaaaatct
ggtcaagatggtttacctggtcttccaggctcaaagggagaacaaggggaaaagggagaa
gctggtgaagcaggctccaagggtgaatcaggcccccctggaccagctggcatagtgggc
gagaggggtgaagctggtcttccaggccaatctggtttgcctggtccaagaggagaaaaa
ggaaaccagggtgaaaaaggaagagctgggctcactggcttcaaaggtgagagaggagaa
aagggtgaaattggtgctcctggtctcccaggtccacctggaaaagttacctcatttaca
ccaaggcctagtattccaggagaacaaggtccaaaaggtgaaaaaggtgatcgtggagaa
agaggtgaacccggagaacgaggtgttccaggaaaacagggtccaatcggacctgtgggg
tcagagggtctgaaaggacaagaaggggaagtaggtcatcctggacctccaggagaaatg
ggtgtccctggacctgcaggaccacctggcccacgtggtttgcctgggaatgtgggtata
ccaggagctactggtcaaccaggaactgatggacaaaaaggagaaaagggagaacctggt
aaggaaggaaaactaggtccacctggacctacaggtgaaccaggagctgttggaggacct
ggattacctggaaagggtcgagatggagaaaggggtgaaagaggtccaccaggtttacct
ggaccctttgggcagaagggagatcgaggtgctccaggtgttccaggtcaaccaggagat
agaggaaccccaggtgttggactttcagggccactaggacctgtgggacctcctggagag
aaagggccaccgggttctcggggtttaccaggcatccaaggtccccctggactgactggt
caggatggtttacctggaaatccaggagaaagaggaccaccaggaaaaccaggttcccct
cctatccttacccctgatgacatcagactgttcgttaaggatatttgcactgattgtccc
cctgggccctctggtctccctggaatgccaggacagaagggtgataaaggccttcgaggc
tcacctgggaatgatggacccgttggaaaaaggggagaacctggactgagaggtccccct
ggacctccaggaggggaaggtcccaagggttctaaaggagaggatggggcatctggtgaa
gctggactgaagggtgaacagggtcatcctgggatgcctggcttcatgggtccccctggg
aatccaggcccagctggagcagagggctccccggggcctgtaggctctccaggacctcca
ggagaaatggggaaagaaggtctcccaggacctcagggacccccaggattgcctggactc
atgggtgtagctggaaatgatggaaaagatggcaaaccaggatcaccgggggaaccaggt
aagcctggagacccagggctaccaggccaagaaggtgccagaggaccaccaggttttaag
ggtccaagaggagatgcaggaagtcctggcatgagaggagaaccgggtcaacctggaact
ccgggcagggaggggcaatcaggaaaagacggagatccagggcctgtgggaccagaagga
ccccgaggacttcgaggaatagcaggcaagactggacctccaggtgctactggggaatct
ggtcctgcaggtaacccaggctccaagggaagcaaaggtgaaactggtagcccaggcgtt
cctggtttcattgggccacgaggacttcgtggagaagcaggcgaaaagggggtcccaggg
aaagagggcaccccgggaagtccaggagagcatggacaaaaaggggataggggagatcct
ggaggcaaaggtgaaaaaggccctgcgggagtaaagggaccaccaggtgatccaggagtt
cctggccgcaaaggacacacgggattaatgggtcccccgggaccatcaggagagtcagga
caagttggtcctcctggctctccaggacaacctggttttcctgggcctagaggagatcct
ccatcaacagaaacattgcgaagacttatccaagaagagttagttaaacaacttgatgcc
agactgccctacctcataagtcagttgcagccttcccagatcaaagcaccccaaggtaga
ccagggcctcctggatcacctggagcagaaggtcctcctggtagagtcggccctccagga
caacctggtagacctggacaaccaggttcagaaggtccatcaggacctatgggaccaaaa
ggtgacggaggagagaaaggagaaaagggagatcctggcattggccagagaggtgaaact
ggtcccccaggagtagcaggtattccaggtgaacctggctatggtaaggatggacttcct
ggagcacaaggtcctcaaggtgaagctgggactcctggccttatgggccccccaggacct
ccaggggccaatggacaatgtgatccctcccaatgtgcttattatgcaagcctagccgct
cggcccagcaacatcaaaggaccttaa
DBGET
integrated database retrieval system
