Crotalus tigris (Tiger rattlesnake): 120309382
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Entry
120309382 CDS
T08476
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120309382 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120309382 (MBD4)
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120309382 (MBD4)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
120309382 (MBD4)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120309382 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
120309382
NCBI-ProteinID:
XP_039202483
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MAVQRNTRLRTKRSSTRNAGTEIELCISRSPVSLPELGNGEEDCKSSLESNLGLRSNTGE
PEIPATCLQDGPSTGDISKDCFFKSDENGTIRRKVPIRKCKKTSEIKNVTDGQNKIQSLP
VHKKQTGCSKRAICKNKMCVLNSDTSDNKVCRRSSRKRKICFKDELLFEPNTEQNDKQIE
PFLEHKTSTEILKYTESSYSGITTAAKKNCISVTEMQRNGMASESASEQSASTMDVTVSQ
MCGEKPFTSAKKSHTQKTQVERRKTSPYFSRKLIKEAPSPPRRKTFRKWTPPRSPFNLVQ
ETLFHDPWKLLIATIFLNKTSGKMAFPVLWEFFKKYPSPKVARLANWKEMSELLKPLGLY
ELRAKTIVKFSDEYLVKQWKYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNIYHSW
LWENHEKLNINY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcagaggaatacacggttaagaaccaagagatcttctaccagaaatgcaggg
acagaaattgagctttgcatttctaggagtccagtttcactccctgaattaggaaatggt
gaagaagattgtaaatcttctctagaaagtaacttggggcttcgatccaatactggagaa
ccagaaattcctgctacctgtttgcaggatgggcccagtacgggagatatttctaaggac
tgttttttcaaaagtgatgaaaatggtacgattcgaagaaaggttccaattagaaaatgt
aaaaaaacttctgaaataaagaatgtcactgatggccaaaacaaaatacagagtctacca
gtacataaaaaacagacaggatgcagtaaacgtgccatatgtaagaacaaaatgtgtgta
cttaatagtgataccagtgacaacaaagtatgccgaagaagctcaaggaaaagaaaaata
tgttttaaggatgaactgttgtttgaaccaaacacagagcagaatgataaacagattgaa
cctttcttagaacacaaaacaagcacggaaatattaaaatatactgagagttcttacagc
ggaattacgacagctgctaaaaaaaactgcatttcagtaacggaaatgcaaagaaacggg
atggcttcagagagtgcaagtgaacagagtgcttccactatggatgttactgtttcccag
atgtgcggagagaaaccttttacatcagccaaaaagagccatactcaaaaaacccaagtg
gaaaggcggaaaacaagtccatatttttccagaaagttaatcaaagaagctccaagtcca
ccaagaaggaaaactttcaggaaatggactccacctcgttctccttttaatctggttcag
gaaactctgtttcatgatccatggaaacttctgattgcaaccatatttctgaacaaaact
tcaggaaagatggctttccctgtgctttgggaattttttaagaaatatccttcaccaaag
gtagcaagacttgccaactggaaagaaatgtcagaattgcttaaacctcttggcctatat
gaacttagagcaaagaccattgtcaaattctcagatgaatatttggttaaacagtggaaa
tatccaattgaattacatgggattggaaaatatggaaatgattcttacagaatcttctgt
gtaaatgaatggaaagaggtacagccacaagaccacaaactgaacatttatcattcctgg
ctgtgggaaaaccatgagaaattaaatattaattattag
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