Crotalus tigris (Tiger rattlesnake): 120314670
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Entry
120314670 CDS
T08476
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03420
Nucleotide excision repair
ctig04115
p53 signaling pathway
ctig04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120314670 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
120314670 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
120314670 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctig04121
]
120314670 (DDB2)
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120314670 (DDB2)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
120314670 (DDB2)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120314670 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
DUF3965
Motif
Other DBs
NCBI-GeneID:
120314670
NCBI-ProteinID:
XP_039213929
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MPLFNKMGSRKQSKNEHLNPREHQSEKVSKSSGKRKRDYGELDNGLQAKKLFVKKTKLQK
IGQACFGSMVRNSRVAFHPWEMQKNIVHYIYQNMVGGTIGPQLKKCLQVPFVRSLYLYRL
FRTASPFDRRITALEWHPMHPSTVAVGSKGGDIILWNYEVLNKTCFIKGIGAGGAITGMK
FNPFNPSELYTSSVAGTTALQDFNGNTIRVMANTDDWDFWYCSVDVSATRRTVVTGDNVG
NVILFSTEGEQIWNLKLHKKKVTHVEFNSHCDWLLATASVDQTVKIWDLRNLKDKSSCLH
VLQHDKAVNAAYFSPTDGAKLLSTDQHNEIRVYSSSDWSKPQHSISHPHRQFQHLTPIKA
TWHPRYDLIVVGRYPDPKFPGYTADELRTVDIFDGNSGEMVCQLHDPNASGIFSLNKFNP
MGDTLASGMGFNILIWDREVMISKKQEDLMQAMKEQNIGLKNVLHQRGQRQRQSNTETNK
FRTKLLSVEFEDTKTKGKEYTVYTKRRKNPEDS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatttaacaaaatgggttctaggaagcagtcaaaaaatgagcatctgaatcca
cgtgaacatcaatcagaaaaagtgtcaaaatcatctggaaaaaggaagcgagactatgga
gaactagataatgggctacaagcaaaaaaactatttgtgaagaaaaccaaactgcaaaaa
attggacaagcttgttttggctccatggttcgaaattcaagagttgccttccatccatgg
gaaatgcaaaagaatattgtccactatatttatcaaaatatggtgggtggcactattgga
ccacagcttaagaagtgtctccaggtgccctttgtacgttctctctacttgtaccgtctg
ttccgaacagcaagtccatttgacagaagaattacagctttggaatggcatccaatgcac
cccagcacggtggctgtgggctccaaaggaggagacatcatcttgtggaattacgaagtg
ctcaataaaacatgttttattaaagggattggagctggaggggctatcacaggaatgaag
tttaatccttttaatccaagtgagctatatacatcatcagttgctggaactactgccttg
caagattttaatggcaatacaatccgggtcatggccaataccgatgactgggatttctgg
tattgcagtgttgatgtatctgcaactcgtcggactgtagtaacaggagataatgtaggg
aatgtgattttgtttagtactgaaggtgaacagatatggaatttgaagctgcacaaaaag
aaagtaactcacgtggagtttaattctcactgtgattggctgctggctacagcctctgta
gatcagacagtcaaaatctgggatctgagaaatcttaaggataaatcaagttgtcttcat
gtacttcagcatgataaagctgtcaacgcagcttatttcagcccaacagatggtgctaag
ctactgagtacagatcagcacaatgaaatccgggtttattcttcttcggattggtccaaa
ccacagcattcaatttcacatcctcatagacagttccagcatctcacacctatcaaggca
acatggcatcctcgttatgatctcattgtggttggtcgttatccagaccctaagttccca
gggtacaccgcagatgagctgagaactgttgacatatttgatggaaacagtggagagatg
gtgtgccaactacatgatccaaatgcatcgggcattttctcgctcaataagtttaacccc
atgggcgacaccttggcttcaggaatgggctttaatattctgatatgggaccgagaagtg
atgataagtaagaaacaggaggatctcatgcaagctatgaaagagcagaacattgggctt
aagaatgtactccaccaaagaggacagaggcaaagacaatcaaacacggaaacaaacaaa
ttcagaactaaactgctcagtgttgaatttgaggacactaaaacaaagggtaaagaatac
acagtgtacactaagagaagaaagaacccggaggactcatga
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