Crotalus tigris (Tiger rattlesnake): 120314782
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Entry
120314782 CDS
T08476
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120314782 (SCAF8)
03041 Spliceosome [BR:
ctig03041
]
120314782 (SCAF8)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120314782 (SCAF8)
Spliceosome [BR:
ctig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120314782 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120314782
NCBI-ProteinID:
XP_039214163
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MEAVKAFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPGTTATLSNNTPGTPVTPATPANVIQSLPDPWV
SQITNTDTLAAVAQILQSPQGQQLQQLIQTLQMQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAATNTLNPLEQSVSFNKKLIDRFGDFGEETDLNEEPKKETPTSQLPLVSESVNNS
LFHQLAEQLQQQNLEHLRQQLLDQQPPKVSPEETQEENFGSEHSASPSQDSSHQQFLEVE
TKLDNSMDVQQQDMDIDEAQEIVEQEVFEQEEKKPAVLSRSRTRSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKI
GSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKVDDLDGFAEGGMIDQETVNSEW
ETTRTSETVKESVQITQSATVEKTTVVTTQAETYKQSVTMLQIPVAPTVPTVNLVPPAFP
VTMSVPPPGYSGIPPPPFLRASFNPSQPPPGFMPPPVPPPVPPPVVPTSLVQPSLTIAQE
SMKDFSSLVLPGGTVSSSLTTSTLSAGSVFSSLSNNSSELDEKGSLRADLPTSSTENRTV
QDDVSSSSGLTEGVQPSGITTSSGHVGGIQPPHVSSSAGLVQPVSVSSSSGLLTRIQPPT
ASNSSGLITGVQAPSVSSSSGLLSGLQTINVSSSSSLLMGIQPPIVSNNTGRLSGIQPPI
VSNSSGLLTALQPPIVSSNSAILGLPPPMVSSSSGLLGLPPPNISGGSGLLGLQPPTGIQ
NLPHLTIASQRLPGISLVEIRSGLIPQPPGARFPLLQPGMPPQRTVPPPTILDPSLPPPR
VPFLPGDIFTQTERPFVTSGRHNMDISNPDKRLPVGEDSIQQEGDRDYRFPPMESRDRTS
SVDIRDSVGRPPLDPREGLGRPPMDGREHLLRPHIDLRENFGRPGIDNLRREHFAFNSEK
HWGQRGDYDEREHQTFPVYGSLKGFQEARDRYRQTNYRFEIRSGPTWNRGLEQDAHRDFD
DRRRPWERQRDRDDRDFNFGREINGNRFGRERTQNNWIPPPHPRAFEYFEGGASQQKVDS
VPQVNGENTETVNQPSAVQVQDELELYEKLATSNETKKEKSDTEAELETEPVVESTETEG
T
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaagcttttaatagcgagctttactcactgaatgattacaagcctcct
atttcaaaggctaaaatgacacagattactaaagcagcaatcaaggccataaagttctac
aaacatgttgtgcagagtgttgagaaattcattcaaaagtgtaaaccagaatacaaggtg
cctggcttatatgtcattgactcgattgtacggcagtctcgacatcagtttggacaagaa
aaggatgtctttgctcctcggtttagcaataacatcattagcactttccagaatttatat
cgttgccctggggatgataagagtaaaattgttagagtgctcaatttgtggcagaagaat
aatgtgttcaaaagtgaaattatccagcctctattggatatggcagcaggaattcctcct
ccagttgttactcctgttttgccagggacaactgctactttgagtaataatacaccagga
actccagtgactcctgctactccagccaatgtaatccaaagtttacctgatccatgggta
tctcagataactaatacagatacgcttgctgctgtagcacagatccttcaaagtccacaa
ggacaacagcttcagcaattaatacagacattgcagatgcaacaacaaaaaccacaacca
tcattgcttcaagcactggatgctggtctcgtcgttcagctacaggctctcactgctcaa
cttacggctgctgctgctgccaccaatacactcaatccactagaacagagtgtctctttt
aacaagaagctgatagataggtttggagattttggagaagaaactgatttgaatgaagag
cccaaaaaggaaactccaacttctcagttgccccttgtatctgaatccgtgaacaattca
ctttttcatcagctagctgaacaactacagcaacaaaacttagaacatcttcggcagcag
cttctagatcagcagccaccaaaggtcagccctgaggaaactcaagaagaaaattttggt
tctgagcattcagcatcaccttcacaagacagcagtcaccaacagtttttagaagtggaa
acaaagcttgacaattcaatggatgttcaacaacaggacatggatatagatgaagcccag
gagattgtagaacaagaagtctttgagcaagaagaaaagaaaccagcagttctttcaaga
tcacgaacacgctcaagatcacgttcaaggtcaccaagaaaaagaaggtcaagatcacgg
tctggttctcgaaagcgtaaacacagaaagcgctcacgttctagatcaagagaaagaaag
aggaagtcatcaagatcatactcaagtgaaagaagagctagagaaagggaaaaagaaaga
cagaaaaaaggattacctcctatccgatcaaaaacactaagtgtctgcagtaccacgctt
tgggttggtcaagtggacaagaaggccacccagcaagatttaaccaatttatttgaagaa
tttggacaaatagaatctataaatatgatccctcccagaggttgtgcatatgtctgtatg
gttcataggcaagatgcttatcgtgctcttcagaaattaagctctggatcttacaaaatt
ggatctaaaattattaagattgcatgggctttaaataaaggagtgaaaactgaatacaaa
cagttttgggatgtggatctcggagtatcatatataccctgggaaaaagttaaggtggat
gatttagatggctttgcagaaggaggcatgattgaccaggaaacagtaaatagtgaatgg
gaaactacaaggacttcagagactgtaaaagagagtgtgcagataacccagagtgcaact
gttgagaaaaccacagttgtcacaacacaggcagaaacttataaacaatctgtcactatg
ttacagattcctgtagcgccaactgtgccgactgttaatttagttccacctgcatttcct
gttacaatgtctgtccctccacctggttacagtggaattcctccgcctccattcttgaga
gcaagctttaatccttcacaaccacctcctggtttcatgcctccacctgttccgccacct
gttccaccacctgtagtcccaacatctcttgtacagccgtcgctgactattgctcaagaa
tcaatgaaagattttagcagccttgttctaccaggtggtacggtttctagtagtcttacg
acatcaacattatctgccggaagtgtcttttcttctctttcaaataacagttcagaattg
gatgaaaaaggatctcttcgtgctgatcttccaacctcttctacggaaaacagaactgtt
caagatgatgtttcaagcagttctggacttaccgagggagtacagccatctggtatcaca
accagttctgggcatgtagggggaattcagccaccacatgtctcaagtagtgctggactt
gtgcagccagtcagtgtctcaagcagctctggacttttgacaagaattcaaccacccact
gcttcaaatagctctggtcttataacaggtgttcaggctccaagtgtctcaagtagctct
gggcttttgtcaggacttcagacgataaatgtttcaagcagctccagccttttaatgggt
atccaaccacccatagtctcaaataatactggacgtttgtcaggaatccagccacccatt
gtatcaaatagttctgggcttttgacagcactccaaccacccattgtatcaagcaattct
gcaattttaggattgccaccaccaatggtttcaagtagttctggactgttaggattacca
ccaccaaatatttcaggtggttctggactattaggactacaaccacccactggaattcaa
aatttgccccatttaactattgctagtcaacggttgcctggaatttctctagtagaaatc
cgatcgggattaataccacaaccacctggtgctagatttccactactgcaacctgggatg
ccaccacaacgtacagttcctcctccaactatacttgatccatcccttcctccacctaga
gttcctttccttccaggagatatttttactcaaacagagaggccatttgtaacttctggt
aggcacaatatggatatttctaacccagataaaagattgcctgttggggaagatagcatt
caacaagaaggagatagagactatcgctttcctccaatggaaagtagagatcgaacatct
tcagtagatataagggattctgttggaaggccacccctagatccaagagaaggtctaggt
cgacctcctatggatggaagagaacatcttctcagaccacatatagatttgcgggagaac
tttggaaggccaggtattgataatctaaggagagagcattttgctttcaactcagaaaaa
cactggggtcaaagaggagattatgatgaaagagaacatcagacctttcctgtatatggt
agtctcaaagggttccaggaagctcgagacagataccggcaaacaaactacagatttgaa
attcgaagtggtcctacctggaacagaggacttgaacaagatgctcacagagactttgat
gaccgtcgtagaccatgggaaaggcaaagggacagggatgatagagattttaattttggt
agagaaattaacggaaacagatttgggagagagagaacacagaacaactggataccccct
ccgcatccaagagcgtttgaatattttgaaggtggtgcttctcaacaaaaagttgatagt
gttccccaagttaatggtgaaaacacagagacagtgaatcagccatctgctgtgcaagtg
caggatgaattggaactttatgaaaagttggcgacttcaaatgagacaaaaaaagagaag
agtgacacagaagctgaattagaaactgaaccagtggtagaaagcacagaaactgagggg
acataa
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