Crotalus tigris (Tiger rattlesnake): 120317266 Help Entry 120317266         CDS       T08476                                  Symbol COL5A2 Name (RefSeq) collagen alpha-2(V) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism ctig  Crotalus tigris (Tiger rattlesnake) Pathway ctig04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ctig00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     120317266 (COL5A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ctig00536]     120317266 (COL5A2) Glycosaminoglycan binding proteins [BR:ctig00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120317266 (COL5A2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  120317266 NCBI-ProteinID:  XP_039219646 LinkDB All DBs Position Unknown AA seq 1423 aa AA seqDB search MIQCLEPLDCENPRVSPGECCPTCPNTARTGFEASIGRGLKGQKGEPGVVPVVTGTRGRP GQSGPPGSQGPRGARGPKGRPGARGPPGVDGEPGVPGQPGDPGPPGQPSTGPDGISRPFA SQMTEQDDAFSQMMMPGPVGPVGPRGAPGNHGKPGPIGPTGPPGELGDPGSMGPPGVRGP EGPPGKPGEDGEPGRAGQPGEVGFPGSPGARGFPGTPGHQGLKGPRGEKGRDGPKGEIGA LGSKGESGPSGQMGGIGPMGPRGMAGERGRIGPQGVPGARGSHGMPGKPGPAGPLGIAGS PGFPGIPGMKGEAGPTGARGPEGPQGPRGETGARGPLGLFGLPGALGTDGSPGTKGPSGS PGVSGPLGLSGPPGSPGPQGSTGPPGIRGQMGDPGVPGFKGEAGPKGEPGPHGLQGPIGP VGEEGQRGPRGDPGSVGAPGSVGERGPPGNRGFPGSDGLPGPKGAQGERGLAGASGPKGS QGDPGRMGEPGLPGARGLTGNPGVSGPEGKLGPLGAPGEDGRPGPAGPIGIRGQPGSMGL PGPKGSSGDPGKPGEAGNAGVSGQRGAPGKDGEVGPAGPVGPHGPAGERGEQGPPGPTGF QGLPGTPGPPGEGGKPGDQGVPGDSGALGHLGPRGERGHPGERGNPGSPGLQGEKGMAGG QGPDGPKGNPGPSGASGDQGPPGLQGMPGERGLAGTPGPKGDRGSIGEKGGEGTAGNDGA RGLPGPLGPNGPAGPAGEKGEPGPRGLVGPAGSRGNPGSRGENGPTGPVGFAGPQGPDGQ PGVKGEPGEPGQKGDAGSPGPQGLSGSHGPPGPPGVPGLKGGRGTKGPPGATGFPGSAGR VGPPGPTGAPGPVGPLGEPGKEGPPGVRGDPGAHGRVGDRGPAGPSGGPGDKGDSGDDGQ HGPDGPPGPSGTTGQRGIVGMPGQRGERGMPGLPGSAGTPGKQGPTGPTGDKGPSGPIGP PGAHGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGEPGPAGFPGSQGIPGTPGPVGSPGD SGQRGEPGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRGFTGLQGLPGP PGPTGEQGSAGIPGPFGPRGPPGPVGPLGKEGNPGPHGPVGPPGVRGTLGEAGPEGPPGD PGPPGPPGPPGHLTAAIGDIMGHYDDGLPDPLPEFTEDEAAPDDSNKTDPGVHATLKSLS SQIETMRSPDGSKKHPARTCDDLRSCHPSKKSGEYWIDPNQGCVEDAIKAFCNMETGESC IAANPAIIPRKTWWTSRSSDLKPIWYGLDMNRGSQFVYGDNQSPNTVITQMTFLRLLSKE ASQNITYHCKNSIGYMDDQTKNLKKAVVLKGANDHDIRAEGNNRFRYTVISDTCSKHNGN VGSTVFEYKTQNVARLPIIDIAPVDVGGTDQEFGIEIGRVCFV NT seq 4272 nt NT seq  +upstreamnt  +downstreamnt atgattcagtgtctcgaaccactagattgtgaaaacccacgggtttcccctggagagtgt tgtcctacatgcccaaacacagcccgaactggatttgaagcttctatcggtagaggactg aagggtcaaaaaggagaacctggagtagtaccagtggttacaggtacaagaggacggccg ggacaatctggacctccaggttcacaaggtccaagaggagctcgaggacccaaaggaaga ccgggtgcccgtggccctccaggagtagatggggaacctggtgtacctggacaacctggt gaccctggacctcctgggcaaccatccactggaccagatggcatcagcagaccatttgca tctcagatgacagaacaagatgatgccttttcacagatgatgatgcctggtccagtgggt cctgtgggtccaagaggagctccgggtaatcatgggaaaccaggtcctattgggcccaca ggtcctccaggtgaacttggtgacccaggatccatgggtccacctggtgttcgtggccca gaagggcctccaggaaaacctggtgaagatggtgaacctggcagagcagggcaacctggg gaagttggatttccaggatctccaggagctcgaggttttcctggtacaccaggtcatcaa ggtctaaagggccctagaggagaaaagggacgtgatggtcctaaaggtgaaattggagcc cttggatctaagggtgaatcaggtccatcagggcagatgggtggaataggtcctatgggt ccccgagggatggcaggagaaagaggacgaattggaccacaaggcgttccaggggcacgt ggttcacatggtatgcctgggaaaccagggccagcaggtcctcttggtatagctggttca ccaggttttcctggtatacctggcatgaagggtgaagctggtcccacaggtgcacgtggt ccagaaggtcctcaaggaccaagaggagaaacaggcgcccgaggtcctctaggattattt ggtcttcctggtgctttaggtacagatggctccccagggacaaaagggccttcaggatct ccaggagtttcagggccacttggcttatcaggtccacctggttctccaggaccacaaggc agcacaggccctcctggcattcgaggacaaatgggagatcctggcgttccaggtttcaaa ggagaagctgggcccaaaggagagcctggtccgcatggcctccaaggaccaattggacct gttggtgaagaaggacaaagaggtcctcgtggtgatccaggatcagttggtgctcctgga tctgttggagaaaggggtccacctggcaaccgtggctttccgggatctgatggtttgccg ggaccaaagggcgctcaaggggaacgtggtcttgcaggggcttcaggccctaaaggaagc caaggagatcctggccgcatgggtgaacctggtctaccaggtgctaggggtctgacaggg aatccaggggtctcaggtccagaagggaaacttggtcctttgggtgctccaggagaagat ggtcggccaggccctgcaggtccaattggaattagaggccagccaggcagcatgggtctt cctggaccaaaggggagcagtggggatcctggaaaacctggagaagcaggaaatgctggt gtctcagggcagagaggggcacctggtaaagatggtgaagttggccccgctggtcctgtt gggccccatggaccagcaggagaaagaggagagcaaggtcctccaggtcctacaggcttt cagggtttacccggtaccccaggccctccaggagaagggggaaaaccaggtgatcagggt gttcctggtgattccggagctctaggtcacttaggtccaaggggagagcgtggccatcct ggtgaaaggggaaacccaggatcacctggccttcagggggaaaagggaatggctggtggt caaggtcctgatggtccaaagggtaatccagggccctcaggagcatctggggatcaggga cctcctggtcttcagggaatgcctggagagagaggcctggctggaacacctggccccaag ggtgatcggggtagcataggagaaaaaggaggtgaaggcacagccggcaatgatggggcc agaggactcccaggtccattaggcccaaatggccctgcaggtccggctggtgaaaagggt gaacctggtcctcgaggtttagttggccctgccggctctcgtggaaatcctggctcccgt ggtgaaaatggcccaactggcccagtgggatttgctggccctcagggtcctgatggtcaa cctggtgtcaaaggtgaacctggggagcctgggcagaaaggagatgctggatccccagga cctcaaggtctttcaggatctcatggtccaccaggcccccctggggttcctggactcaaa ggaggccgtggtacaaaaggaccccctggtgctacaggttttcctggatctgctggaaga gttggacccccaggacctacaggagctcctggtccagttgggcctcttggagaaccaggc aaagaaggtcctccaggtgttcgtggagatcctggtgctcatgggcgagtaggagataga ggcccagcaggaccatctggcggccctggagacaaaggagattcgggagatgatggacaa catggtcctgatggccccccaggtccgtctggaactactgggcagaggggcattgtggga atgccaggccagcgtggagagaggggcatgcctggcctgccaggctctgcaggaactcct ggaaaacaaggtccaactggaccaacaggggacaagggtccttctgggcctattggtcct ccaggtgctcatggaccggtgggtgaagcagggccagaaggtcctgctggtaatgatggc acacctggacgagatggagctgttggtgaaaggggtgatcgtggtgaacctggacctgca ggatttcctggttctcagggtattcctggcactccagggccagttggctctccaggggat tcgggacaaagaggtgaaccaggttcacgaggcccagtaggtccccctggccgtgctgga aaacgaggtttgcccggcccccaaggtccccgtggtgacaaaggcgacaatggtgatcga ggtgacaggggacagaaaggtcatcgaggtttcactggcctgcaaggtctccctggacct ccaggacctactggtgaacaaggcagtgctgggattccaggcccatttggcccaagaggt cccccaggtccagttggacctttaggtaaagaaggaaatcctgggccacatggaccagtt gggcctcctggtgtaagaggaactttaggagaagcaggacctgagggtcctcctggtgat cccggtcctccaggcccaccaggtccccccggacatcttactgctgcaattggtgacatt atgggacattatgatgatggtctaccagacccactaccagagttcactgaagatgaagct gctccagatgacagcaataaaacagatccaggagtccatgccacactgaagtcattgagt agccagatcgaaacaatgcgcagccctgatggatctaagaagcacccagcccgtacttgt gatgatttaagatcatgtcatccatccaaaaagagtggagaatactggattgaccctaat cagggctgtgtagaagatgcaatcaaagcattctgcaacatggaaacaggagaatcatgt atagctgcaaatccagctattattccacgtaagacgtggtggacaagtagatcatctgat ctaaaaccaatatggtatggacttgatatgaacagaggttcacagttcgtttatggcgat aatcaatcacccaacacagtgatcacacaaatgactttcctgcgcttactttccaaagag gcctctcagaatatcacctatcattgcaaaaacagtataggttacatggatgaccaaact aaaaacctaaagaaggctgtggtgctgaagggagccaatgaccatgatatccgagctgag ggaaataaccgttttagatacactgtcatttctgacacctgctctaaacacaatgggaat gtgggcagtacagtctttgaatacaaaacacagaatgtggcacggttacctatcattgat attgccccagtagatgttggaggcacagaccaagaatttggaatagagattggacgagtt tgttttgtgtaa

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