Chloracidobacterium thermophilum: Cabther_A1171
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Entry
Cabther_A1171 CDS
T01629
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
ctm
Chloracidobacterium thermophilum
Pathway
ctm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Cabther_A1171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctm03021
]
Cabther_A1171
Transcription machinery [BR:
ctm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cabther_A1171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AEP11925
UniProt:
G2LD65
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All DBs
Position
1:complement(1386536..1388050)
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AA seq
504 aa
AA seq
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MRYELDSGEEGFSTMEGEEISVTDTADDEASDTISVYLKSLSHTTLLTRQEETFVAREME
RHERRAARMLSRALPVAAYVVQLAKNLQSEGLRLSDLLVLPRGEDEADGERCEAPLKPDL
DERQERALCEKFAAIEAAHAGIRAMVAQPGYKHTSRNLDIHRLRIRIGRILYKLPFNKTI
RRRVELAWGNVVDEALTLKAERARLEYRLKDTSLDAATSRLLKHQLKAVRARIRDLECNC
ALPLDGIIADWKRFAETKQKAEAYKLRMIESNLKLVVFIGRDFMGRGLAMEDIIQEGNIG
LIRAVEKFDWRRGIKFSTYAVWWIKQAIQLAIANQSRTIRLPTYMVDRVNRVRRVLRQMT
TNGDEDPTPEEIAPLVGLTPDDVRQVLNVVTEPVSLETPTADDDGEHSLGDLLPDHNSQD
PLRASMTVEMAQNLREALSRLSARESEVLMLRFGLMPDGREWTLEEIGARFQLTRERIRQ
IEMRALAKLSHPSRSRKLRDALHL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacgagctggattccggtgaggaaggcttttccacaatggaaggcgaagaaatt
tcggtcacagacacggcggacgatgaggcgagtgataccatttcggtatatctcaaatca
ctgtcgcacacgactctgctgacacggcaggaagaaacgttcgtggcccgcgaaatggag
cggcacgaacgccgtgcggcccgcatgctgtcgcgggcgctgccggtggcggcctacgtt
gtgcagttggccaaaaacctgcaaagcgaagggctgcgactttccgacctgctcgttctg
ccacggggagaggacgaagccgatggcgaacgctgcgaagcgccgctcaaaccggacctc
gatgaacggcaggagcgcgcactgtgcgaaaaatttgcggccattgaagccgcgcatgcc
gggattcgggccatggtggcccaaccgggctacaaacacaccagccgcaacctcgatatc
caccggctgcgcatccgaattgggcggattctctacaagctgcctttcaacaaaaccatt
cggcgccgggtcgaactcgcgtggggcaatgtcgtggatgaggccctgacgctcaaagcc
gaacgtgcccggctcgaataccgcctcaaggatacaagcctcgatgctgccaccagtcgt
cttctcaaacaccaactcaaggccgttcgggcacgcattcgtgacctggaatgcaactgc
gcccttcccttggatggcatcattgccgactggaaacgttttgccgaaaccaagcagaag
gccgaagcttacaagctccgcatgatcgagtccaatctcaagctcgtggtgttcatcggg
cgggatttcatgggtcgcggactcgccatggaagacatcatccaggaaggcaatattggc
ctgattcgcgccgttgagaagtttgactggcgccgtggtatcaagttttcaacctacgcc
gtctggtggatcaagcaggcgattcaactggccattgccaaccagtcacgcaccatccgc
ctgccgacctacatggtggaccgggtcaaccgtgtccggcgtgtgctgcgccagatgaca
accaatggcgacgaagacccgacgcccgaagaaattgcgccacttgtcggactcacgccg
gacgatgtccggcaggtgctcaatgtggtgacagaacccgtctcgctcgaaacccccacg
gctgacgacgacggcgagcactccctcggcgacctgctcccggaccacaacagccaggac
ccactccgcgcgtccatgacggtggaaatggctcagaacctgcgcgaagccctcagccgt
ctttcggcgcgtgagtcggaagtgctcatgctgcggtttggactgatgccggatggacgc
gagtggacgctggaggaaatcggcgcccgcttccagttgacccgcgagcgcattcgccag
atcgagatgcgcgcgctggccaagctcagccatccgagccgcagccgcaaactgcgcgac
gcactccacctctga
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