Chloracidobacterium thermophilum: Cabther_A1574
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Entry
Cabther_A1574 CDS
T01629
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ctm
Chloracidobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctm03019
]
Cabther_A1574
03009 Ribosome biogenesis [BR:
ctm03009
]
Cabther_A1574
Messenger RNA biogenesis [BR:
ctm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Cabther_A1574
Ribosome biogenesis [BR:
ctm03009
]
Prokaryotic type
rRNA processing factors
Cabther_A1574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AEP12324
UniProt:
G2LJ37
LinkDB
All DBs
Position
1:complement(1895627..1898611)
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AA seq
994 aa
AA seq
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MNKEMIISVNAYEKRVAILENGVVVEFYIERADESKAVVGNIYKGRVRKVLPGMQSAFVD
IGLERDAFLYVGDFFEETEEDLDTTEPLPRLPAERSERPERQPEPARRETNGRRSGRDHR
SEVTEPPAVTGIREATAVDLEPTEEAVAVPPVSEAPGEAGAAGESPVDDVRVETPLLSSL
LGSAAGAQFERVSDDDTITSQEASSVRGESGQRVVAEEAASGEDRLEIEREALAEAIEPG
APRERRRGRRKEVIGEEKKKSSRRRSRKVEDEVAELITAETSAAGPPAVEVQFERVRDDD
YEEEAGDLLKDAIIQQKIIAQTRIEELTTTSEEPAPEPVEAATSDAPTIEPLTLGYERIA
DDDEPLTTGAEPFTEETESATGDAALLAVPVETTSVPEPSATSDAVTTEATPAEAMPVQT
GAADIGEASPQEEMETGRAGDGEEKAQGDTAQLQVRPSQAEFPPRRGRRGRRRSGARTAV
TPGDESAESDDRSDTPEETAEPSATPEAESHRPDPDRLPENGNTGGTPGEPAVVVREIPV
SAESLSLIEAQNAVESRPDLRAGREARPAARPAREDRRDPDLPRRQPAITELLREGQEII
VQIAKEPIGLKGARITSYVSLPGRYLVYLPTINHIGVSRKISTEQERARLKRTMTMLRER
EGVTGGFIVRTACEGRSEQDLCDDMLYLARTWRDIRRRAEQARAGTVLCRELDLVQRLLR
DHMSSDFSVIRVDDPGEYTNIVDFINRFQPKLVDRVRLYTRNRPIFEEYNIQPEIEAALK
PRVWLKSGGFIVINQTEALVAIDVNTGKFVGKSNRLEDTITRTNLEAAAEIVRQIRLRDL
GGIIVLDFIDMEDRRNRQKVMQVLEQAMKADRSPSKITSFNDFGLVAITRKRVRQSLERM
LSEPCHYCGGSGMIKSAQTMCYEILSDAKHLAKEKAASSQVFSEVTLRVSPAVADLLRGA
ESRVLREIEFSFGVPVTLHSDPNIHQERFDFAFM
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggaaatgatcatcagcgtgaacgcttatgaaaagcgggttgcgattctggaa
aatggtgtcgtcgtcgaattctacatcgagcgggccgatgaatccaaagccgtcgtgggc
aacatctacaagggcagggtacgcaaggttctccccggaatgcagtcggcctttgtggac
atcgggctggagcgggatgcctttctctacgtcggggactttttcgaggaaaccgaagaa
gacctcgacacaacggaaccccttccccggttgcctgctgaacgaagcgaacgcccggaa
cgtcaacccgaaccagcacggcgggagacgaacgggcggcgcagcggacgcgaccaccgt
tctgaagtgacagaaccgccggccgtgacagggattcgtgaggcaacggctgttgatctg
gagcccacggaagaagcggtggctgtgccgcctgtctcggaagctcccggtgaagcaggt
gcggctggagaaagcccggtggatgatgtcagggtggagacgcccctgctgtcttcactt
ttggggtcggctgccggggcgcagtttgaacgggtcagtgatgatgacacgataacaagt
caggaagcttcatctgtccgtggcgagtcagggcagagggtggttgcagaggaagctgcc
agcggggaagaccgtctcgaaatcgagcgggaggcgctggcggaagccatcgaaccgggt
gcgccccgtgaacgacggcgcggccggcgcaaggaggtcatcggtgaggaaaagaaaaaa
agctcacgtcgccgcagtcggaaagtcgaagacgaagttgcagaattgatcaccgccgag
acttcggcagcagggccgccggcggtggaagttcagtttgagcgcgtgcgcgatgatgat
tacgaagaagaagccggcgacctgctcaaggatgccatcatccagcaaaagatcatcgcc
caaacccgtattgaagagctgaccaccacctctgaagaaccggcaccggagccggttgaa
gccgcgaccagtgatgcgccaaccattgaaccgctgaccttgggctatgagcggattgcc
gatgacgatgagccattaaccaccggcgctgaaccgttcacggaagagaccgagtctgcc
acaggcgatgcggcacttctggctgtgccggttgaaacaacgtctgttcctgagccatcc
gccacatcagatgctgtgaccactgaagctacgccggcggaagcgatgccggtgcaaacc
ggagcagcggatattggcgaagccagccctcaagaggaaatggaaacaggcagggccgga
gacggcgaagaaaaggcacagggtgatacggcccagcttcaggtacgtccgtcgcaggcc
gaattcccgccacggcgtggtcgccggggccggcggcgcagcggtgcacgcacggccgtc
accccaggggatgaatccgctgagtcggatgaccggagtgataccccggaagaaactgcc
gagccgagcgccacaccggaagctgaatcacaccggcccgatcccgaccggctgcctgaa
aacggcaacaccggtggtacgccaggggagccggctgtggtggtgcgggagattccggtg
agtgcggagtcgctttccctcatcgaagcccagaatgctgttgagtcccgtcctgatctc
cgcgctggacgggaggcgcgtccggcagcacgtccggcgcgggaagaccgtcgcgaccct
gacctgccacgtcggcagccggccattacggagttgctgcgcgaagggcaggaaatcatc
gtccagattgccaaggagccaattggcctcaaaggcgcccggattacttcgtatgtgtcc
cttccggggcgttacctcgtgtatctgccaactatcaaccacatcggggtttcacgtaag
atttcaaccgaacaggaacgggcgcggctcaagcgcacgatgaccatgttgcgggagcgg
gaaggcgtcacaggcgggttcattgtgcggaccgcctgcgagggccgttcggagcaggac
ctgtgcgatgacatgctctacctggcccgcacgtggcgcgacatccggcgccgggccgag
caggcccgggcgggaacggtgctctgccgtgaactggaccttgtccagcgtttgctgcgc
gatcacatgtcgagtgacttttcggttattcgggtggatgatccgggcgaatacaccaac
atcgtggatttcatcaaccgcttccagcccaaactcgtggaccgggtgcggctctacacg
cggaatcggccgattttcgaggaatacaacatccagcctgaaatcgaagccgccctcaaa
ccacgggtctggctcaagtcgggtggtttcatcgtcatcaatcagacggaggcgctcgtg
gccattgatgtgaacacgggcaaattcgtcggcaagtcgaaccgtctggaggacacgatc
acccggaccaatctggaagccgcggcagaaatcgtccgccaaatccggttgcgtgacttg
ggcgggatcatcgttctggacttcattgacatggaagaccgccggaaccgccagaaggtc
atgcaggtactggagcaggcgatgaaggctgaccggtcgccttccaagattacgtccttc
aatgatttcgggctggtggccattacacgcaagcgggtccgccagagcctcgaacggatg
ctgagtgagccgtgtcactactgtggcggcagcggcatgatcaagtcggcgcagacgatg
tgctacgaaattctgtcggacgccaagcatctcgccaaggaaaaggccgcttcgagccag
gtgttcagcgaggtgacgttgcgggtgagtccggcggttgccgacctgctgcggggcgct
gaatcacgggtgctgcgggaaatcgaattcagcttcggggtccctgtcaccctgcacagt
gacccgaacattcaccaggaacgtttcgatttcgccttcatgtaa
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