Chloracidobacterium thermophilum: Cabther_A1756
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Entry
Cabther_A1756 CDS
T01629
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
ctm
Chloracidobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctm03019
]
Cabther_A1756
Enzymes [BR:
ctm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Cabther_A1756
Messenger RNA biogenesis [BR:
ctm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Cabther_A1756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_19
AAA_22
ResIII
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AEP12502
UniProt:
G2LEW9
LinkDB
All DBs
Position
1:complement(2094252..2096732)
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AA seq
826 aa
AA seq
DB search
MPLPIDAFLPGIVETLHAAGRLVIQAAPGAGKTTRVPAALLEAGLSASGDIVVVVPRRLA
ARLAARFVAQSYGEAVGQTVGYTVRFDDRTGPATRLRFVTDGILTRRLLHDPTLRGTGIV
IVDEFHERHLSTDLALAHLHRLRQGVRPDLKVVVMSATLDAERVSAFLADAPVVTVPGQT
FPVTVDYLPPPGAVPLSRQVAAALERCLREGPDGDVLVFLPGMAEIRACLRECAPLAARH
NLALHALHASLPAAEQDAAVRPGPRRKVILATNVAESAITIEQVAVVIDSGLVRRVEYAS
WTGLPQTTIGRVSQASAIQRAGRAGRTRPGRCLRLYTEADFNLRPPFETPEIHRTDLAEA
VLELRAAGICDISTFPWFEPPTAEALAAAEAALHRLGALDAEGLTAVGRAMLELPVAPRL
ARLVVEGHRQGMVREACRVAALLGERDVRRAATVPPGYGQSDVLALLDTFETANEAATVA
RVRQVEQQLLRCVRRLSPEWLAASAGEVAGEVESRLGRCLLVAFPDRVGRIRRRPDGERE
VLLPGGGRARLAASSVVTEPGLALALDAETQMDGTTLVRLASQISPDWLLELFFDAIEET
DTHELNAEGRVVRFRRLLYQGIVFEERTLPTVEPAVASRLLVDRLRASGGSVWPAEPALD
RLQARLAFAAAHVPEAGLKPFTDDDVWAAVEELCPGCVTLEEVRQALQQQRLSALLLARL
TPVQRAQLDDIAPENLLLGRRRVSIGYPVDGPPFIAAPIQDFFGIRETPRLAHGRVPVTL
HLLAPNRRPVQVTTDLAGFWKRAYRELRPQLARRYPKHAFPEVGGE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttccgattgacgcctttctgcccggcatcgttgagaccctgcacgcagccggt
cggctggtcattcaggccgctcccggcgctggaaagacgacccgtgtcccggcggcgctg
ctggaagccgggctgtccgcatcaggcgacatcgtggtggttgtcccgcgtcgcctggcg
gcgcgcctggcagcccgtttcgtggcccagtcgtacggggaagcggtcgggcagacggtc
ggctacacggttcgcttcgatgaccgcaccggcccggcaacgcgcctgcgcttcgtgacg
gatggcattctcacgcgccgtctgctccacgacccaaccctgcgcggcacgggcatcgtc
atcgtggatgaattccacgaacggcatctctccactgacctggcgttggcgcacctgcac
cggctgcggcagggtgtgcgtcctgatctcaaggtggtggtcatgtcggcgacactcgat
gccgaacgggtgtccgccttccttgccgacgcgccggtggtgacggtgccggggcagacc
tttccggtgacggtggactacctgccgccgccgggtgcggtgcccctgtcccggcaggtg
gcagcggctcttgagcggtgcctccgggagggacccgacggggatgtactcgtcttcctg
ccgggcatggccgagattcgcgcctgtctgcgcgagtgcgccccgctggccgcgcgccac
aatctggcgctgcatgctctgcacgccagcctgccggcggcggagcaggatgctgccgta
cggcccgggccgcgccgcaaggtcattctggcgaccaacgttgccgagtcggccatcacg
attgaacaggtggcggttgtcattgacagcggtctggtgcgccgcgtggagtacgcaagc
tggacgggcctgccccagacgacgattgggcgcgtctcccaggcgtccgccatccagcgc
gccggccgcgccggccggacccgtcccggacgctgcctgcggctctacaccgaggcggat
ttcaacctgcgcccgccttttgagacaccggagattcaccgtaccgatctggcggaggcc
gtcctggaactgcgggccgctggcatctgcgacatatcaacctttccgtggtttgagccg
ccaacggccgaggcgctggccgcggccgaagcggccctgcatcgcctgggggcgcttgac
gccgaagggttgacggccgttggccgcgctatgctcgaactgccggtcgcaccgcgtctg
gcgcggctggtcgtcgaaggccaccggcagggcatggtacgggaagcctgccgggtggcg
gcactattgggtgagcgcgatgtccgtcgggcggcaaccgtcccgcccggctacggacaa
tcggatgttctggcgctgctcgatacgttcgagaccgccaacgaggccgccacggtagca
cgggtgcggcaggtcgagcagcaactgctgcggtgtgtgcgccgtctgtcgccggaatgg
ctggcggcgtcggcgggtgaggttgccggggaagttgaatcccggcttgggcgctgcctg
ctcgtggcgtttcccgaccgggtgggccggatacggcggcggcccgacggagaacgggag
gtgcttctgcccggcggcggacgggcccggctggcggcgtcgagcgtagtgactgaaccg
gggctggcgttggcactcgatgccgaaacgcagatggatggaacgacgctcgtgcggctg
gcaagccaaatctcaccggactggctgctggagttgtttttcgatgccatcgaggaaacg
gacacgcacgagctgaacgccgaagggcgtgtcgtccgcttccggcggctgctctatcag
ggcattgtctttgaggaacggacgcttccgacagttgagccggccgttgcgtcccggctg
cttgttgaccgtctgcgcgcgagcggaggaagtgtctggccggccgagccggcgcttgac
cgtctgcaggcgcgactggcctttgcggcggcccatgtcccggaagccggtctcaaaccc
tttaccgacgatgatgtgtgggcggctgtggaggaactgtgtcccggttgcgtaaccctg
gaggaagtccggcaggcgcttcagcagcagcgtctgtctgccttgctgctggcacggctg
acaccggtgcagcgggcgcagctcgatgacattgcaccggaaaacctgctgctgggccgc
cgccgtgtgtccatcgggtatccggtggatgggccgccattcatcgctgcgcccatccag
gatttcttcggcatccgggaaacaccgcgcctggcccacgggcgcgttcctgtcaccctg
cacctgctggcacccaatcggcggccggttcaggtcacaactgatctggccggcttctgg
aaacgggcctaccgtgaactgcgcccgcaacttgcccggcgctatccaaagcacgccttc
ccggaagttggtggcgagtag
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