KEGG   Candida tropicalis: CTRG_05635
Entry
CTRG_05635        CDS       T01115                                 
Name
(RefSeq) histone deacetylase RPD3
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ctp  Candida tropicalis
Pathway
ctp03082  ATP-dependent chromatin remodeling
ctp03083  Polycomb repressive complex
ctp04213  Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CTRG_05635
   03083 Polycomb repressive complex
    CTRG_05635
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    CTRG_05635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ctp03036]
    CTRG_05635
Enzymes [BR:ctp01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     CTRG_05635
Chromosome and associated proteins [BR:ctp03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     CTRG_05635
   HDAC complexes
    Sin3A-HDAC complex
     CTRG_05635
    BRAF-HDAC complex
     CTRG_05635
    REST complex
     CTRG_05635
    SHIP complex
     CTRG_05635
    MiDAC complex
     CTRG_05635
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     CTRG_05635
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CTRG_05635
  Chromatin remodeling factors
   NuRD complex
    CTRG_05635
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 8300849
NCBI-ProteinID: XP_002551337
UniProt: C5MHU2
LinkDB
Position
Unknown
AA seq 615 aa
MYVDLPFDELKVDPNQKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKM
EIYRAKPATKQEMCQFHTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCG
ISGGGSMEGAARLNRGKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVL
YIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGEFFPGTGELRDIGVGKGKYHAVNVPLRDG
IDDATYKSVFEPLITKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCVNFVKSF
NIPLMVLGGGGYTMRNVARTWAYESGLLNNVKLPNELPYNEYYEYYGPDYKLDVRPSNMF
NQNSPEFLDKILLNIISNLENTKHAPSVQMNEVPNDPEDLGDVEEDTAEAMDTKGGSEMN
RDSQIQPDNEFYEDDDKDKGEKDISNNKDEDAMDIDKPEEAKPEESKPEEAKPEEAKPEE
AKPEEAKSEEAKPEESKHEETKPVEAKHEESKPEESKPEESKPEEQPAPVEEPKSIEEVK
TADESKPSEETKPETITLEESKSQEPRAEEEPKPEEPKESKPEDAKPIDEDHPMEDANKP
TEEELKEIEELNKEE
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgtatgttgatctaccatttgatgaattaaaagtagatccaaatcaaaagaaacgtatt
gcatatttttatgatgcagatatagggaattatgcttatggtgctgggcatccaatgaaa
ccacatcgtataagaatggcacattcattaattatgaattatggattatataaaaaaatg
gaaatttatcgtgctaaaccagctacaaaacaagaaatgtgtcaatttcatacagatgaa
tatattgattttataagtcgagttaatcctgataatttagatttatttactaaagaacaa
attaaatttaatgttggtgatgattgtccagtatttgatggattatttgaatattgtggt
ataagtggtggtggatcaatggaaggtgcagcaagattaaatcgtgggaaatgtgatatt
gctatcaattatgctggtggattacatcatgctaaaaaatcagaagcaagtggattttgt
tatttaaatgatattgttttaggtataattgaattattaagatatcatccaagagtttta
tatattgatattgatgttcatcatggggatggtgttgaagaagcattttatactactgat
agagttatgacttgttcatttcataaatatggggaatttttcccaggtaccggtgaatta
agagatattggagttggcaaagggaaatatcacgcagttaatgtcccattaagagatggt
attgatgatgctacttataaatctgtatttgaacctttgattactaaaattattgaatgg
tatcagccatcagctattgttttacaatgtggaggtgattctttaagtggggatcgattg
ggatgttttaatttatctatgaatggtcatgcaaattgtgttaattttgtcaaatctttt
aatattccattaatggttcttggtggaggtggttataccatgagaaatgtggcacgtacc
tgggcatatgagctgggattattgaataatgttaaattacccaatgaattaccttataat
gaatattatgaatattatggtccagattataaattagatgttcgaccttctaatatgttt
aatcaaaattcccctgaatttttggacaagattttattgaatataatatccaatttggaa
aataccaaacacgctccttcagttcaaatgaatgaagttccaaacgatcctgaagatttg
ggagatgtcgaagaagatacagctgaagcaatggatactaaaggtggatccgaaatgaac
cgtgattctcaaatacaaccagataatgaattttatgaagatgatgataaagataaaggt
gaaaaggatataagtaataacaaagacgaagatgcaatggacatcgataaaccagaggaa
gccaagccagaagaatccaagccagaggaagccaaaccagaggaagccaaaccagaggaa
gccaaaccagaagaagccaagtcagaggaagctaaaccagaggaatccaagcatgaggaa
actaaaccagtggaagccaagcatgaggaatctaaaccagaggaatctaaaccagaagaa
tctaagccagaggaacaaccagcaccagtcgaggaaccaaaatcaatcgaagaagttaaa
acagctgatgaatctaagccatctgaagaaaccaagccagagaccattactctcgaggaa
tctaaatctcaagagccacgcgcagaagaagaacccaaacctgaagagccaaaagaatcc
aaaccagaagatgctaaaccaatagatgaagatcatccaatggaagatgctaacaaacca
actgaggaggaattgaaagaaattgaagaattaaacaaagaagagtag

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