Chloroherpeton thalassium: Ctha_1533
Help
Entry
Ctha_1533 CDS
T00726
Name
(GenBank) PKD domain containing protein
Organism
cts
Chloroherpeton thalassium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Sde0182_C
BiPBP_C
PKD_3
DUF4399
Y_Y_Y
REJ
Big_9
Motif
Other DBs
NCBI-ProteinID:
ACF13992
UniProt:
B3QS47
LinkDB
All DBs
Position
1799636..1804396
Genome browser
AA seq
1586 aa
AA seq
DB search
MMKLFFRASTFLFVLFFLTVTLYAQDVFLSISGQKASNLSGDTRHQHDYWLRPSKSAGSA
ILRVFDAGVSWGTADVVYGTVETQTTFAVYPVSAIYDVFGDSLSEKMRVYGNPNYSLTAQ
DEPVFRERWATIGELNPVGSPNGYILRVTTNDGNDVNAFKIMVAKSGNINTPSEDWVVVA
SDLTLGLYNFPPNLEVQLQPLRASEAPPEFDFLGEEAAILRLKDDFGHATNLTNLGDFWQ
PARAATENHWGLSISRIGQNNHFSVFGKEKKVFWILKPNIVKTPELPKVQVRQVPGSDCG
SVRLTLIGYQRNVETVREPVWVFENEKIVGDSAEIYFGKPDDYMAEVWIPNEGMYFPKYW
IHPFQVHINAPPKAVISYDVLSAAPGQQTSFSARNSSDAEDRNLSYRWFVEGTLRGKESV
FNFSSKTPGKYSIILTVTDNATNSFCTSASDSVILTVNSQPYTEIRFPEEFARKETVVFV
AEKDSDPDADKLSYKWQGSGVQSDDEERAVEIRHERHGVYSVSQTVDDNHGLANSKYTKT
VSYRVNAEPEPRFSLPEQAAPNDVLKLSAASTTDADDKELDFAWQSSDWQSFKGRDIDIS
FLNPGDYKVTLTVDDGHNVSNSVQILTKNIHINAPPFPMITAQNSSTIARQVFSAKYSSD
SDSEDLRYFWDFGDGEKDRGLEVVHTFQKSGIYTITLTVDDQEKQTNSVQKTTHRFRLHR
YPVAKFDLPKYAEPKHAFAVDASASYAPDGNIRQYKWFVDNRFAATGKTANLQISTPGDH
IVSLLVTDDSGFEDAKSLATEKIHVNFEPLPRWEVSLPVAAPEQWIAFDAGDSYDLDGRI
QNYTWTFSDGAVESGRKVTRKFSESGKVDFTLTVDDGTGFENAVQNTTGSVLINSTPIIV
APKTIRSNSRRVKLDASESYDVDRQALNFEWILPDGSKRHEAAFYWDAPKTGGVYFVSLN
VDDGKNLKNSRASHTVKVLVNRPPVAVTDTLVRACTGQTILFNGSRSFDPDGDALKVSWD
FGDGTTSGETDPAHVYRKPGEYSVVIKLDDGFAPEPTLAVIPVIIGSSPLAIQSFADTTV
CVQTMLDFDGSQSEYPSGIIGSYAWDFGDGETALGKTVQHAFSKPGTYKVILTVVSAEGS
FTTTGCSKIGQSSSTVRVIAGPVADFNAKNWVAIGDTVYLDASPSTTTTRILSADWRILA
DKEGKGDSATAKLGTRVLHVFQKPGLYPVILTIRDDNQASCNTSSTVKNIRVNAAPELSW
RVPKAVALGEQVLLDAARSLDPDGLITHYNWTLDDQMIGETPAVIKSFSEAGEHELKLTI
TDNSPTRTKSVSAKSSIFVNTSPKPTFVLPEKIYEYELLELQAKPEVDADGDRLSFSWQV
DGSPYGYDETRFTGGRHTLQLVADDRRGLSNSKDSIFTEIHVIPSPELEADFPEHIVVGQ
TLSSERDWKRESIGFVVDGQLQPTYTLAQTGRVAVKLGWAPKGIILKDSFRYLTVWEPLR
FTETPAPMVLVWNPANPTVILSVPGVNRPASKMPLFRWKRGAMVLGYGETQEVPLYKGTN
TFTVEAYEPDVAGSKTVSVEIVVKTQ
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaactattttttagagcatctacatttttatttgttttgtttttcctaacggta
acgctttatgctcaagatgtatttttgtccatttccggccaaaaagcttcaaacctgagc
ggcgatacgcgccaccagcacgattattggcttagaccgtcaaaaagcgccggaagcgcc
attttgcgcgtttttgatgcgggcgtgagttggggaacagccgacgtcgtctatggaaca
gtggaaactcaaacgacttttgcggtttatccggtctcagcgatttatgatgtgtttggc
gatagtttatcggaaaaaatgcgcgtttatggaaatcctaactattccctgacagctcag
gatgaaccggttttccgcgagcgctgggcgacgattggcgagctaaatccggtcggttct
cctaacggctatattctgcgtgttaccacgaatgatggaaacgatgtgaatgcctttaaa
atcatggtagctaaatcgggaaacatcaacacgccgagcgaggattgggtggtggttgcc
tctgacctaacgcttggtctttataactttccgcccaatttggaagtgcaacttcagcca
ttgcgagcatctgaagcgccgcccgaatttgactttcttggcgaagaagcggctattttg
cgattgaaagatgattttgggcacgccacaaacctaacaaacttgggagatttttggcag
ccagcacgagccgctacggaaaatcattgggggctttccatttcgcgaattggccaaaac
aaccatttttcggttttcggcaaagaaaaaaaggttttttggatcttgaagccgaatatt
gttaaaacgcccgagctgccgaaagttcaggtgcgccaggtgcccggcagcgattgcggc
agtgttcgcctaacgctgatcggttatcaacgaaatgttgaaaccgtgcgcgagccggtt
tgggtttttgaaaatgaaaaaatagttggagattcggcggaaatttattttggcaagcct
gacgattacatggctgaagtttggattcctaacgaaggcatgtatttccccaaatattgg
attcatccgtttcaggtgcacatcaacgcgccgccaaaggctgttatttcgtacgacgtg
ctcagtgcggcgcctggccagcagacttcgttttctgcaagaaattcgagtgatgccgaa
gatcgaaacttatcctatcggtggtttgtggaaggaacgcttcgtggtaaggaatcggtt
ttcaatttttcaagcaaaacgcctggaaagtattccatcatcctaacggtaacggacaat
gcgacgaactctttttgcacctcagcgagtgactcggtaatcctaacggttaattcgcaa
ccttacaccgaaattcgattcccggaagaatttgcacgaaaagagaccgttgtgtttgtc
gctgaaaaagatagtgatccagatgccgataagctttcttacaaatggcaaggttccggc
gtgcaaagcgacgacgaggagcgagccgtggaaattcgccacgagcggcatggtgtttat
tccgtttcccaaacggtagacgataatcacggccttgcaaattcgaaatacacaaaaacc
gttagttaccgcgtgaatgccgagccggagccgcgtttttccctgcctgaacaagctgca
ccgaacgatgttctaaagctttctgctgccagcaccaccgacgcagatgataaagagctt
gattttgcttggcaatcctccgattggcaatcgtttaagggacgcgatatcgatatttcg
tttttaaatccaggcgattataaggtcaccctaaccgttgatgatggacataatgtttca
aattctgttcaaatcctaacgaaaaatattcacatcaatgcgccgccttttccaatgatc
acggcacaaaatagttcaaccattgcgcggcaagtgttttccgcaaaatattcctccgac
agtgacagcgaagacttgcgctacttctgggactttggcgacggcgaaaaagatcgtggc
ttggaagtggtgcacacatttcaaaaaagcgggatttatactattaccctaacggttgat
gatcaagaaaaacaaaccaacagcgtgcagaaaaccacacatcgttttcgtttgcatcgc
tatccagttgcgaaatttgatttgccgaaatacgctgagccaaagcacgctttcgcagtg
gatgcgagcgcgagctacgcgccggatggcaatattcgccagtacaaatggtttgtggat
aaccgttttgcggcaacggggaaaacggcaaacttgcaaatttccacgccgggcgatcac
attgttagtttgttagttacagatgactctggctttgaggatgccaaaagcctggcgacg
gaaaaaattcatgtgaattttgaaccgttgccgcgttgggaggtttctttgccggtggct
gcgccggagcagtggattgcgttcgatgcgggcgattcttacgatttggacgggcgcatt
caaaattacacttggacattttctgacggtgcggtcgaaagcggtcgaaaagttacgaga
aagttttctgagtcaggcaaggtggattttaccctaacggttgatgatgggacaggtttt
gagaacgccgtgcaaaacaccacaggctcagtgctgattaatagcacgccgattattgtg
gcgccaaaaacgattcgctcaaactcgcgacgcgtgaaactggacgcttcggaaagctat
gatgttgataggcaagcgctcaattttgagtggattttgcctgacggttcaaaacgccat
gaggctgcattttattgggatgcaccaaaaacggggggcgtttattttgtcagtttaaac
gtcgatgatggaaaaaatttgaaaaatagccgagcaagccacacggtgaaggtgctggta
aacaggccgccggtcgcggttacggacacgcttgttagggcttgcaccggccaaacgatt
ttgtttaacggttcgagatccttcgatcctgacggcgacgcgctgaaagtcagctgggat
ttcggcgacggcacaacctctggcgaaacagatccggcgcatgtgtatcgaaaaccaggc
gaatacagcgtggtaattaagctcgacgacggctttgcgcctgagccgactttggctgtc
attccggtgattattggtagttcgccgctggcgattcagtcctttgccgataccacggtt
tgcgttcaaaccatgctggattttgatggcagccaaagcgaatatccgtcgggcattatt
ggctcgtatgcctgggattttggcgacggggaaacggcgctcggcaaaaccgtgcaacat
gcgtttagcaagccgggcacgtataaagtgatcctaacggttgtgagcgcggaaggcagt
ttcacaacaacgggatgcagcaaaattggccaatcatcttctacggtgcgcgtgattgcg
gggccggttgcggatttcaacgcgaaaaattgggttgcaatcggcgatacggtttatttg
gatgcgagcccatccacgacaacaacgcgcattctttccgccgattggcgcattttggct
gataaagaaggcaagggcgactcggcaacggcaaagttgggaacgcgcgttttgcatgtg
tttcaaaaaccgggactttatccggttatcctaacgattcgtgatgataatcaggcgtcg
tgcaatacctcaagcacggtgaaaaatattcgcgtcaatgctgcgccggagcttagctgg
cgcgtgccgaaagcggtggcgcttggcgagcaagtgctgctcgacgccgcgcgttccctt
gaccctgacggtcttatcacacattacaattggacgctcgacgaccaaatgatcggtgaa
acgccggctgtcatcaagtcattttcggaggcgggcgagcatgaattaaagctcaccatt
accgacaactcgccaacgcgaacgaaatccgtttcagcgaaaagctctattttcgtgaat
acgtcgccgaagccgacgtttgttttgccggaaaaaatttatgaatatgaacttctcgag
cttcaagccaagccggaagtcgatgccgatggcgatcggttgagtttttcatggcaagtg
gacggctcgccttacggttatgacgaaacccgttttactggcgggcgacacacgcttcaa
ctggtggcagacgatcggcgcgggctaagcaattccaaagattctatttttacagaaatt
catgtcattccgtcgccggaattggaggcggattttcctgaacacattgttgtggggcaa
acgctttcctcggagcgcgattggaagcgcgagtcaatcggctttgtggtggatgggcag
cttcagccgacctacacgctggcgcaaaccgggcgtgtggccgtaaagttgggctgggcg
ccaaaaggcatcattttgaaagatagcttccgttacctgacagtttgggagccgctgcgc
tttaccgaaacgccagcgccaatggttttggtctggaatccggcaaacccaactgtgatt
ttgagcgtgccgggtgtgaatcgtccagcaagcaaaatgccacttttccgttggaagcgc
ggcgctatggtgctgggctacggggaaacccaagaagtgccgctttacaaagggacaaat
acctttacggttgaagcctatgaaccggatgtggctggctcaaaaacggtgtcggttgaa
atagtcgtaaaaacgcaataa
DBGET
integrated database retrieval system
