Comamonas thiooxydans: CtCNB1_0262
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Entry
CtCNB1_0262 CDS
T01109
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ctt
Comamonas thiooxydans
Pathway
ctt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CtCNB1_0262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctt03400
]
CtCNB1_0262
Enzymes [BR:
ctt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CtCNB1_0262
DNA repair and recombination proteins [BR:
ctt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CtCNB1_0262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ACY31008
LinkDB
All DBs
Position
complement(297835..298638)
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AA seq
267 aa
AA seq
DB search
MFKLTSLNLNGIRSATTKGAEAWIEATAPDCICVQEIKAQASDMAGRFEVLAGMKGYFHF
AEKKGYSGVGVYTRHEPSDVVVGFDIEEFDAEGRYVETRFDTPGRKFSVISAYFPSGSSG
ELRQEAKFRFLAKMHSHLMHLKAERDFVLCGDINIAHQKEDLKNWRGNQKNSGFLPEERD
WMSKLLHKTEAGGGLVDVYRQLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAIAA
LARTESIYKGEKFSDHAPITIGYDMAI
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaattaaccagcctcaacctcaacggtatccgctctgccacgaccaaaggcgcc
gaagcctggatcgaagccactgcgccggattgtatttgcgtccaggaaatcaaggcccag
gcttcggatatggccgggcgcttcgaggtgttggccggcatgaagggctacttccacttt
gccgagaagaagggctattcgggcgtgggcgtctatacccgccacgagcccagcgatgtg
gtcgtgggcttcgatatcgaagagttcgacgccgagggccgctatgtcgaaacccgcttc
gacacgccaggccgcaagttctccgtcatcagcgcctactttcccagcggcagctcgggc
gagttgcgccaggaggccaagttccgctttctcgccaagatgcacagccacctgatgcac
ctcaaggcagagcgcgacttcgtgctctgcggcgatatcaatatcgcgcaccagaaggaa
gacctgaagaactggcgcggcaaccagaaaaacagcggcttcctgcccgaagagcgcgac
tggatgagcaagttgctgcacaagaccgaggccggcggcggtctggtcgacgtctatcgt
cagcttcagcccgacaccacggatgcctgctatacatggtggagcaatcggggccaggcc
tatgccaacaacgtgggatggcgactggactaccacctggccacaccggcgatcgcggcc
ctggcccgcaccgagtccatctacaagggcgagaagttctcggaccacgcgcccatcacc
attggttacgacatggcgatctga
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