Cronobacter turicensis: CTU_13960
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Entry
CTU_13960 CDS
T00999
Symbol
rhlE
Name
(GenBank) Putative ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ctu
Cronobacter turicensis
Pathway
ctu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTU_13960 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctu03019
]
CTU_13960 (rhlE)
Enzymes [BR:
ctu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CTU_13960 (rhlE)
Messenger RNA biogenesis [BR:
ctu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CTU_13960 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF6426
Motif
Other DBs
NCBI-ProteinID:
CBA29399
UniProt:
C9XZG9
LinkDB
All DBs
Position
1472636..1474138
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AA seq
500 aa
AA seq
DB search
MTMSFDSLGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLP
LLQRLTAKAPHAQGRRPVRALILTPTRELAAQVGENVREYSKYLDIRSLVVFGGVSINPQ
MMKLRSGVDVLIATPGRLLDLEHQNAVKLDQVEVLVLDEADRMLDMGFIHDIRRVLAKLP
PKRQNLLFSATFSDDIKTLAEKLLRNPEEVEVARRNTASEQITQHVHFVDKKRKRELLSY
LIGDGNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKTGGIRV
LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR
DIERVLQREIPRMAIAGYEPDPSIPAEPIVNGRQGRGGRGGQGGGGGRGQGQPRRQDGEG
SRSSGERARRPAGEGNRPAGERSRRQDGEGNRPSGERSRRPAGEGNRPSGERSRRPAGEG
NRPASAKPRARRAPRKASGE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ataactatgtcttttgattcactgggcttaagccctgagatcctgcgcgccattgccgag
cagggttacaacgaaccgactccgatccagcgccaggccattccggtggtgctttcaggt
aaagatttgatggccagcgcccagaccggcaccggcaaaaccgcaggcttcacgctgccg
ctgttacagcgtctgacggcgaaagcgccgcacgcgcaaggccgtcgcccggtgcgcgcg
ctgatcctgaccccgacgcgcgaactggcggcccaggtgggcgagaacgtgcgcgagtac
agcaaatatctcgatatccgctcgctggtggtcttcggcggcgtgagcattaacccgcag
atgatgaaactgcgcagcggtgtggacgtgctgatcgcaacccctggccgtctgctcgat
ctggaacaccagaacgcggtgaaactcgaccaggtagaagtgctggtgctggacgaagcc
gaccgtatgctggacatgggctttattcacgacatccgccgcgtactggcgaaactgccg
ccgaagcgtcagaacctgctgttctccgccaccttctccgacgacatcaaaacgctggcg
gaaaaactgctgcgtaacccggaagaagtggaagtggcgcgccgcaacacggcctccgag
cagatcacgcagcatgtgcatttcgtggataaaaagcgcaaacgggaactgctttcttac
ctgattggcgacggcaactggcagcaggtgctggtgtttacccgtaccaaacacggcgcc
aaccacctggcggagcagctgaataaagacggtatcaccgccgcggctatccacggtaac
aagagccagggcgctcgtacccgcgcgctggcagacttcaaaaccggcggcattcgcgtg
ctggtggcgaccgatatcgccgcgcgcggtctggacatcgaagagctgccgcacgtggtg
aactacgagctgccgaacgtgccggaagattacgttcaccgtatcggccgcaccgggcgc
gccgctgcgaccggcgaggcgctgtcgctggtgtgcgtcgatgaacataaactgctgcgc
gatatcgaacgcgtgcttcagcgcgagatcccgcgcatggcgattgcgggctacgagccg
gatccgtctatcccggcggagcctatcgttaacggccgccagggccgcggcggacgcggt
ggtcagggcggcggcggcggtcgtggtcagggccagccgcgtcgtcaggatggcgaaggt
agccgttcctcaggcgaacgcgcgcgtcgtccggcaggcgaaggcaaccgtccggcgggt
gagcgttcacgtcgtcaggatggtgaaggcaatcgtccgtcaggtgagcgttcgcgtcgt
cctgctggcgagggcaaccgtccgtcaggcgagcgttcacgtcgtccggcaggcgaaggc
aaccgtccggcaagcgccaaaccgcgcgcccgtcgcgcgccgcgtaaagcgtccggggaa
taa
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integrated database retrieval system
