Cyprinodon tularosa (White Sands pupfish): 119788345
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Entry
119788345 CDS
T07496
Symbol
arhgef11
Name
(RefSeq) rho guanine nucleotide exchange factor 11 isoform X1
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119788345 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119788345 (arhgef11)
Membrane trafficking [BR:
ctul04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119788345 (arhgef11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119788345
NCBI-ProteinID:
XP_038148553
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MSLRQPTSTLDSPFAAWVSSLTVGDSERRAPAGQQREPTLDESASPGLVHRCVVVQKDQL
GFGFTVCGERVKLVQNVRPGGAAVKAGVQEGDRIIKVNGSVVSSMTHQEVVKLIKSGPYV
ALTLQGPASSASSVPLEPLPTDASPSQRSSLAGEGQPPPPPPLPPSQRITGPKPLQDPEV
QKHACQILRKMLEQEEAELQDLMDQQLRNPSPSLEERIESAKRRAHQVRVKIQNQEGTRS
EFVTSYIQAGEGRLSMDSSEGDPEPFETPNSSPPSPFRTPHHRRQNSDTHGLSDTGGKAQ
IISPEEVDDDDVDGYRFNEMDSPFQDIELLKSRPAHMTVFMRYVFTQLLDPNPLLFYLSV
EAYLGSSPKDARALAPQICSHFLDPDAPLKIRVKEEYLTDIENRLHAQEDIRGPLSELQQ
LVLPDIQELIQDYRNKQMMGLGSLFGEGDLALLDGDPQKERQVVDRQVTALWEILSKHEE
ERSSPLASAVVLYLRHSGIKLRDSKVFPGLSTEKEKWLPFLKSKKPSSVKKEKDGESKTR
NPILKYIGKPRSTSQSTFHIPLSPTEVRSGSVRNIIQQFENHTDLPGEDEGDAADPQRLS
SSSLGEEDMDSPKVAVRPRRSGSLKAQGEDRRRGAVPGGDSVPRSRSDVDMEDCEEREQP
GLPLLHHSASSSVSSSSARSLENPTPPYTPRSRRRSVDSQQALLPDGALLEDEVCDGQNW
RDTVAPELLATLSPKEVERQAVIYELFTTEVSHLRTLRVLDKVFYRKLKSVLNPEELACI
FPNLPQVYELHASLCEEMKTRRESPIVQDIGDVLLAKVEGAAGHEFQEQVSQLCCQQTQA
LELIKNKKRKESRFAQIIQECEASPQCRRLQLKDLLVSEMQRLTKYPLLLDKIIKHTKAG
SSDLPSLQRAQACFRGILKAVNEDVRETEHRQRLSQYQRRLDAAPQFKSLDLTAKTMIHE
GPLIWKINKDKQIEIQALLLTDCLLLLQKGPDDRLQLRYPSRWLGGGGGGSIDNKTSFSP
LVKLDSLIVRSVATDKKALYIISTTETQIYELVAASPSEKDTWIDLLEKTTSGLKESNHR
SLPVPSPGSNRSSPVLTEVHPVEEQSDFMESLPSHNDHELGDLPTEQPDADGSDEDQAVG
VAEAALHDVETLRRLILPHVEEDRWSHDTDDTPTNTMSNGNAERRRQESLETVLDFCINE
LEPEAPPPKARPPESPPPEDPPTLSRQTSVKVVRKAVVAGAPPPTPSSSAPDGITDDVSL
PSHLPSQSRGEVNQQGNMFYLVLPSEQGESVTDDVRDPATPTANRGVPLRLEEVLSAQIQ
PEDEAAACCSEFSQSETETMQLELDVEEEEEEEEEETGPAEAAQQSHVIKNVDEIFLTIE
GLMSKLHKLKEIETAHNKLLESLRDEAEDQPCPSATVSRTPSMDRSSGDGLERGNDSGAQ
NPVDWILS
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccgccagcccacatccaccctggacagcccctttgctgcttgggtcagcagt
ctaacagttggcgattcggagcgcagagccccggctggccaacagagggagccgacgctg
gatgagagtgcaagtcctggtttggtgcacaggtgtgtggtggtgcagaaggaccagctg
gggttcggcttcaccgtctgcggagaaagagtcaagcttgtgcagaatgtccgaccaggt
ggcgctgcagtcaaagccggggtgcaggagggggaccggatcattaaggtgaacggctca
gtggtttcctccatgactcatcaggaggtggtgaagctcataaaatctgggccgtatgtt
gctctgacgctacaaggaccggcctcctcagcatcctctgttcccctggagccccttcct
acagacgcttcacccagtcagaggtcttccctggctggggagggtcagccccctccaccc
ccacctctaccgccatcccaaagaatcactggacccaaaccgctacaggatccagaggtg
caaaaacacgcatgtcagatactcaggaaaatgttggagcaggaggaggccgaactccag
gacttgatggaccaacagctgaggaacccgtcgccgtcgctggaggagcggatagagagc
gccaagaggagagctcaccaagtcagggtcaagatccagaatcaggagggaacgaggtca
gagttcgtcacaagctacatccaagcaggagaaggacggctgtccatggactcgagtgaa
ggagacccggagccctttgagactcccaactcctcccccccatcaccattcaggaccccc
catcaccgccgccagaactcggacacacacggcctgtctgacacgggtggaaaagcgcag
atcatcagccctgaggaggtggatgatgatgatgttgatggctaccgctttaacgagatg
gacagtcctttccaggacatcgagttgttaaagtcccgaccggcacacatgacggtcttc
atgagatacgttttcacccagctgctggaccccaaccctctgctgttttatctgtctgtg
gaggcgtatttaggctccagccctaaagacgctcgggcgctcgcccctcagatctgctcc
cacttcctggacccagacgctcctttgaaaatcagagtgaaagaggaatatctaacagat
attgagaatcgcctccacgcccaggaggacatcagagggcctctgtctgagctgcagcag
ctggtgctgccagacatccaggagctgatacaagactacaggaacaagcagatgatgggt
ctgggatctctgtttggggagggagacctggcgctgctggacggggaccctcagaaggag
aggcaggtggtggacagacaggtcaccgctctctgggagatactatcaaagcatgaagag
gaaaggagctctcctctggcctcagccgtcgtcctctacctgcgtcactccggcatcaag
ctcagagactccaaggtcttccccggcctgagcacagagaaggagaagtggctgccgttt
ttaaaatccaaaaagccaagcagcgttaagaaagagaaagatggagaaagcaaaacaagg
aaccccatcctgaagtacatcggcaaacccaggagcacatcccagtccacattccacatc
ccgttgtcacccacagaagtgcgttctggcagcgtgaggaacatcattcagcagtttgag
aaccacacagaccttccaggagaggacgagggggatgctgcggacccccagaggctgtcc
tccagcagcctgggagaggaagacatggacagtcctaaggtcgcagtgcgtcccagacgc
agcggctcgttaaaagctcagggagaggaccgccggcggggcgccgtccccggcggggac
tcagtgcctcgctctcgaagcgacgtggacatggaggactgcgaggagagggagcagcct
ggcctgccgctgctccatcacagcgcctcgtcatccgtatccagcagctcggctcggtct
ctagagaaccctacacccccatacaccccccggtccaggcgcaggagtgtggactcccag
caggccctgcttccggacggtgcgttgctggaggacgaggtgtgtgacggtcagaactgg
agggacacggttgctcctgagctcctggcaactctcagccccaaggaggtggagcggcag
gccgtcatctacgagctcttcaccaccgaggtgtcccacctgcggaccttacgggttctg
gataaggtgttctaccgcaagctgaaatccgtgctgaacccggaggagctggcctgcatc
ttcccaaacctgccgcaggtttacgaactccacgcgagtctttgtgaggagatgaagacg
aggagagagagtcccatcgttcaggacatcggagacgtgttgctggccaaggtcgaaggt
gcagccggacacgagtttcaggaacaggtgtcgcagctgtgctgccagcagactcaggct
ctggagctcatcaagaacaaaaaacggaaagagtcgcgctttgctcaaatcatccaggag
tgcgaggcgagtcctcagtgtcgtaggctgcagctgaaagacctgctggtgtctgagatg
cagagactcaccaaataccctctgctgctcgacaagatcatcaaacacacaaaggccggg
tcgtcggacctcccgtcgcttcagcgcgcccaggcctgtttccgtgggatactgaaggcg
gtcaacgaggacgtgagggagacggagcaccggcagcgcctcagtcagtaccagcgccga
ctggatgccgcacctcagttcaagagtctggacctcaccgccaagacgatgatccacgaa
ggtccgctcatctggaagataaacaaagacaagcagatagagatccaggcgctgctgctg
acagactgcctgctcctcctccagaaaggcccggatgatcggctgcagctgcgctatccg
tcccgctggttgggaggaggaggcgggggcagcatagacaacaagacctcattcagccct
ctggtgaagctggactctctgatcgtccgctctgtagctacagataaaaaagctctgtac
atcatcagcaccacggagacacagatctatgagctggtggcagcttctccatctgagaaa
gacacctggatagatttacttgaaaagacgaccagtggtttgaaagagagcaatcacaga
tcacttcctgttccttctcctggttcaaacagaagttcaccagttttaactgaagtccat
cctgtagaggagcagtcagacttcatggagagccttccatcccataatgaccacgagctg
ggcgaccttcctacagagcaacctgacgctgatggcagcgatgaggaccaggcagtcggc
gtagcggaagcagctttacacgacgtggaaactctacggaggctcattttaccgcatgta
gaggaggacaggtggagccacgatacagacgacacccccaccaacaccatgagcaacgga
aatgccgagaggagacgacaggagtccctggagacggtgctcgacttctgcatcaatgaa
ttggagccagaggctccgcccccaaaagctaggcctccagaatctccgcctccagaagat
ccgcccacactcagcaggcaaaccagtgtcaaggttgtgaggaaagctgtggttgcgggt
gctcctcctcctactccttcttcttctgcccctgatggcatcactgatgatgtcagcctc
ccctcccacctgccgtcccagtctagaggcgaggtcaaccagcaggggaacatgttctat
ctggtgttaccctcagagcagggagagagcgtcaccgatgacgtccgtgaccctgccaca
cccaccgccaaccgcggtgtccctctgcgtctagaggaagtgttgtcggcacagattcaa
ccagaggatgaagcagcagcctgctgctcagagttcagccaatcagagacagaaactatg
caattggaattagatgtagaagaagaagaagaagaagaagaagaagaaacgggcccagca
gaagctgcacagcaaagccacgtgataaaaaacgtggatgagatttttctcaccatcgag
ggtttgatgagcaaattgcacaaactgaaggagatcgagacggcccataataagctgcta
gagtcgctcagagatgaggcagaggaccaaccgtgtccctctgcaaccgtctccaggacg
ccctccatggaccgcagctcaggagacggtttggaacgagggaacgacagcggagcccaa
aatcctgtcgactggattctgagctga
DBGET
integrated database retrieval system
