Cyprinodon tularosa (White Sands pupfish): 119788452
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Entry
119788452 CDS
T07496
Symbol
clockb
Name
(RefSeq) LOW QUALITY PROTEIN: clock circadian regulator b
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119788452 (clockb)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119788452 (clockb)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
119788452 (clockb)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119788452 (clockb)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
119788452 (clockb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
Motif
Other DBs
NCBI-GeneID:
119788452
NCBI-ProteinID:
XP_038148724
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MSSNIGDDCCSLTDGLIEEDEKDKAKRVSRNKSEKKRRDQFNVLIKELGTMLPGNTRKMD
KSTILQKSIDFLCKHKEIAAQSESSEIRQDWKPPFLSNEEFTQLMLEALDGFFIAIMTDG
NILYVSESVTSLLEHLPADLVDQNLLNFLPVGEHSEVYKALSTHPVELESISSDYMKTKN
HLEFCCHMLRGAIDPKEPPIYEYVKFIGNFKSLNNVPNITRNGLAGVLQRSLQPAFDDQV
CFVATVRLAKPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFI
VCTHTVVSYAEVRAEQRRELGIEESNPEAAADKSQDSGSESQLNTSSLKEALERFDQSRT
PSTSSRSSRKSSSHVSDITCTSTAPKLHMDMATPPRQSLASNVEMTSQTRSSISSQSMSS
QTTGQSLNPGLITQHQQQQQQQQQEQQQHQTNLQPVMEFSAQVNAMQHLKDQLEQRTRMI
QANIQRQQEELRHIQDQLQRVQGQGIQMLLQQQQQQGGAMNVQLPQGGSVQQAATLTGQV
QQPSVNLLHSGSQQLTIQQQAPPPPPPTQQSLQQQTNTLTQRQPQQAAQTQPQAQGSVSA
PLYNTMMISQPGQPNVLQISTSLPQNNTQQGTAVATFTQDRQIRFPAGQQLVTKLVTTPM
HACGAVMVPTSMFMGQVVTAYNPFGGQQQGGQTQTLTLQPAQSTQCQPDSQNQAAVVAQN
SQQGQQQQQFLQGTRLLHNNQSTQLILQAAFPLQQQGAFTQATLQQQQQQQHQQQQQHQQ
QQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQRQQKQQQSHHQRHQQQLKPQPQKP
QKASSSHRTDSVNQQQ
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaacataggggatgattgttgcagcctcactgatgggttgatagaagaagat
gaaaaggacaaggcgaaacgcgtgtcccgcaacaaatcagagaagaaaaggagagaccag
ttcaatgtcctcatcaaagagcttggcaccatgttgccaggcaacactagaaagatggac
aagtccaccatcctgcagaaaagcatagacttcctgtgtaaacacaaagagattgcagcc
cagtcggagtcgagcgagatcaggcaggactggaagcccccctttcttagcaatgaagaa
ttcacacagctcatgttggaggctttggatggattctttatagcaataatgaccgacggg
aacatcctttatgtctctgagagcgtcacctctttactagaacacctgccagcggactta
gtggatcagaacttgttaaactttctacctgttggggaacactccgaagtgtacaaggct
ctgtcgacgcacccagtggaactggagagcatcagtagtgattacatgaagactaagaat
catctagagttctgctgccatatgttgcgaggggccattgaccccaaggagccccccatc
tatgaatatgttaagtttatcggcaacttcaaatccctcaataacgttccaaacattacg
aggaacggtctggcaggagtgttacagcggtcactgcagcctgccttcgatgaccaggtc
tgctttgtagccactgttcgcttggccaaacctcagttcattaaggaaatgtgcacagtc
gaggagccaaatgaagaatttacctcaaggcacagtctggaatggaaattcctcttctta
gaccacagagctccaccaataattggctacctgccttttgaggtcctgggaacatcaggg
tatgactactaccatgttgatgacctggagacactcgccaaatgtcatgaacacttgatg
cagtacggaaaaggaaagtcgtgctactatcgtttcctgaccaaaggtcaacagtggatc
tggctgcagacccactactacatcacctatcatcagtggaactccagacctgagttcatt
gtttgcacacacacggtggtcagctatgccgaggtaagagcggaacaacgcagagagctt
ggaatcgaagagtccaatccagaggcagctgctgataaaagtcaggactctggctcggag
tcacagctgaacacgtccagcttgaaggaagccctggaacggtttgaccagagccgaacg
ccgtcaacgtcctcgcgaagctcccggaagtcctcgtctcatgtctcggacatcacttgc
acgtcaacagctccaaagctacacatggacatggccacgcctcctcggcagtccctggcc
tccaacgtggagatgacatctcagacacgctcgtccatcagcagccagtctatgagttct
cagaccacagggcagagtttaaatcctggtctgatcacacagcatcaacagcagcagcag
cagcaacagcaagagcagcagcaacatcagacaaatttacagccggtgatggagttctca
gcacaggtgaatgccatgcagcacctgaaggatcagctggagcagagaacccgaatgatc
caggccaacatccagcggcagcaggaggagctgaggcacatccaggaccagctgcagaga
gtccagggacagggcatacagatgttgctgcaacagcagcaacagcagggtggagcgatg
aacgtacagctcccacagggggggtcggtccagcaagcagctactttgactggtcaggtc
cagcaaccctcagttaatctccttcattctggatctcagcagctcaccattcagcagcaa
gctcctcctcctcctcctcctactcagcagagcttacagcagcagaccaacacactcaca
cagcgtcagccacagcaagctgctcagacccagcctcaggcccagggatccgtttctgct
ccgctgtacaacaccatgatgatttctcagccaggacagccaaacgtgctgcagatcagc
accagcctccctcagaacaacacgcagcagggcactgctgtagctaccttcacacaggac
cggcagatccgattcccagcagggcagcagctagtaaccaagcttgtgacaactcccatg
catgcatgtggtgctgtgatggtgcccacctctatgtttatggggcaggttgttacagcc
tacaacccctttggcggccagcagcagggggggcagacccagaccctgactctacaaccg
gcccaatctactcagtgtcagcctgacagccaaaaccaagcagctgtagtggcacaaaac
agccagcaggggcagcagcaacagcagttcctgcagggcactcgtctccttcacaataat
cagtctacccagctgattctgcaggcagcgtttcctctccagcagcagggcgctttcacc
caggcaactcttcaacagcaacaacagcagcaacatcagcagcagcaacaacatcaacaa
caacagcaacaacaacagcaacaacaacagcagcagcagcagcagcaacaacatcaacaa
caacagcaacaacaacaacagcaacaacaacaacagcagcagcagcaaaggcaacaaaag
caacaacaatctcaccatcagaggcaccagcagcagctaaaaccacagccgcagaaaccg
cagaaagcctcgtcgtcacacaggactgacagtgtcaaccagcagcaatga
DBGET
integrated database retrieval system
