Cyprinodon tularosa (White Sands pupfish): 119788613
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Entry
119788613 CDS
T07496
Symbol
shroom4
Name
(RefSeq) protein Shroom4 isoform X1
KO
K18625
protein Shroom
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119788613 (shroom4)
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
119788613 (shroom4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASD2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
119788613
NCBI-ProteinID:
XP_038149076
LinkDB
All DBs
Position
Unknown
AA seq
1779 aa
AA seq
DB search
METVEQLVSFHHIQVQLTGGAPWGFTLKGGLEHGEPLIITKIEDGGKAAHCKRLKVGDEL
ININGSALYGSRQEALILIKGSYRILKLTVRRRSVPLIRPHSWHLAKLSETLPLPPPPSP
PPLTPLLPPADSPPLPPPPPPSAMQLHSGSYALPWHTTDNSDLSIQWDQLPRPYSSTDRS
SSLGSMESLDTPTPTAQQFSDSHNSPVDPTLFNNKRDSAYSSFSASSNTSDYATVPLRPG
EASSMDNLFQSLGPAYQGYSGDASTLGRSSGEAQDQAHLIVLKSRSLTRPKPKSTEIKER
PSSCCYGQGQTKGDLEIVRNGDSQMERKNNPPLPPTRKDSFRATRSRPKAANSCCTSAPL
EDCSVSYCKDNLPCLNVDSAIENGFPVSEKGDQSENFNTDSEDSKFSQRQTEKPIHQRCD
SSSETDSKSETQSEHLFDLVPSPKVTISPSVSPYLSSESAKEIQGESHVNHCQTKHSSTG
LHRHSAPEKLLATQLQLLQLNNHDSSLEPFNPSNTPGPSVSSSNQWSTDLSLQNTTEDPA
LPTSHKRESSRCSTPGSVFVEGECEDGGSSRRLEGLDVNGKSPSPIHHHTPWGRSVSVPG
EPTGERITSDQLAEGAFQPLSAAASMDTLLDEQILVKKGGTGVKNEEVAETEVSTKKSSS
SKNLRRNRRRSERFATNLRNEIQRKKAQLQRGHGPGGLLCSRETVQEEEGSDLCEDGADS
NRPVQNNCTKVAFATSAVPEDSQASSQMKTSNTSGESDFGVLKTTLLTQGNNRSRSVQIL
DPGVPSFGVGIRVVEEPAPAGKARRWRWTPEHKLQPEPDQEQQCGVLGNRVLGVTGSRHG
VCAFSSSSSSSYSRSSSSSRSEESDILPFADRMKFFEETSKGMPVSNASKRISHRQNHQD
RQLDQQRGEISNNSTQMRYSYQGGVQQEGVHFPNTVESRRQSVSAFRKRPKEIAREQLRE
REVRFREIERQQELERQERELEMERAKLREIQREERMRQWERERERELERTKAAEKERME
NQQFPSHPDCYSSPSIREQGNFQYKDQFYNWSGQQTFSHCQNQVPHSAFHLVRNHMQPEN
QEAFHQGYNTRSYTPTEMFHSPQQETTKLGRKYSLTERDYSSWRRESRPPQSVHQQQHPL
HQAQWDSRRPASRSDDRDGCTAAPPPAPLYLRGRAMSENDLRFESSHRWSPSIYGSVSQT
LSKMEEGGDPTSAARQRKKKTPPPPRPPPPKWEQFHSRRASHHALLASSPFAAPPSLSTD
GRHSAHSLSYAPPPDTSRQRSYSLPPERQEAESCFQCSCSRIQTSTLSQPSNQSTAPPSP
MLSRKGFRPVAPPHDEREDEVGAGPAACPPADSPVSSSSGMDVSHSLDPESQPGVRPEAY
WERAAAPSPSSENCRPADAHYSQADQQQQVFISRGFQADQRQNPPESGTEATLSPSQSPA
HSLDAELEVPMETDIDDFQELPVEELPISSELPCFAQPVTVLETDIDTLPDPGDSPSAEA
LDGSGSLEEEEEELELFPPSGEGESETESWRGGCPSAEHNTDSLDRQSGASSSCSSYYHT
SAAKAQILSQMKDFTDRGEKLQEDELTYKKQLMESLRKKLGVLREAQRGLQEDIRANAQL
GDEVENMVVAVCKPNEVDKYRMFIGDLDKVVSLMLSLSGRLLRVETTLDTLDPETEHQDR
LPLLEKKRQLMRQLSEAQDLKDHVDRREQAVSRVLARCLSPEQHRDYSHFVKMKAALLVE
QRQLEDKIRLGEEQLRGLRESLGLGMGMGLGISMGYGHY
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgtggagcagctcgtttccttccaccacatccaggtccagctgaccgggggc
gcgccttggggctttaccctgaaaggaggactggagcacggcgagccgctcatcatcacc
aaaatcgaggacggaggaaaggctgcccactgcaagaggcttaaagtcggagacgaactc
atcaacattaatgggtccgccctttacggcagccgacaggaagctctcatcctcatcaag
ggctcctacaggatactgaagctcacagtgaggaggcgcagcgtccctctcatcaggcct
cactcctggcacctggccaagctgtcggagacgctccccctaccacctcctccgtctcct
ccacctctgaccccactcctcccccctgcagactcccctccgctcccccctcctccccct
ccgtctgccatgcagctccactccggctcctacgctctaccctggcacacaaccgacaac
agtgacttatctatacagtgggatcagttgccgagaccatactcctccactgaccgaagc
agttcccttggttctatggaaagcttggacacaccaacgcccactgcacagcaattctcg
gactcccacaattcacctgttgaccccaccctcttcaacaacaagcgagactccgcctac
agctccttctctgccagttcaaacacttctgactacgctacggtgcctcttaggcctggt
gaagcctcctccatggataacctcttccagagcctcggcccagcatatcaaggatactct
ggtgatgcctccactcttgggaggtcatctggtgaggcacaagatcaggcgcatctaatt
gtgctcaagtccagatcgttgaccaggccaaaaccaaagtccaccgagataaaagagagg
ccatcatcctgctgttatggacagggccagacaaagggggatttggagattgtaaggaat
ggagattctcaaatggagagaaagaacaacccccctctgcctccaactcgtaaggacagc
tttagggcaacccggagtcgccctaaagctgccaacagctgctgcacctcggctccactt
gaagattgcagcgtttcttattgtaaagacaacctgccttgtctgaacgttgattctgca
attgaaaatggtttccctgtatcagagaagggtgatcaaagtgaaaacttcaatacggat
tcagaagactcaaaatttagccaaagacagactgaaaaacctatacatcagagatgcgat
agtagctctgaaactgactctaaatcagagactcaatcagaacacctcttcgacttggtt
ccatccccaaaagttaccatcagtccttctgtttcaccttacttatcctctgaatctgct
aaagagattcagggggagtcccatgtaaaccactgtcaaacgaagcactcatccacaggc
cttcaccggcacagtgcccccgagaagctactcgccactcaacttcagctactgcagtta
aacaaccatgattcctctctggagccctttaacccatcaaacactcctggtccctcagta
tcctccagcaaccagtggtctaccgatttgtccctccagaacacaactgaggacccagca
cttcccacatcacataagcgggaaagtagccgatgctcgactccaggatctgtgttcgta
gagggagaatgtgaggacgggggctcaagtcgaaggctggaaggattggatgtaaatggg
aagtctccctcaccaattcatcaccataccccttggggtcgttctgtaagtgtaccaggt
gaaccaactggagaaaggataacctctgatcagctagcagagggtgcctttcagccgctc
agtgcagctgccagcatggatacattactggacgagcaaatacttgtgaaaaaggggggg
actggggttaaaaatgaagaagtggcagaaacagaagtaagcacgaagaagtcgagctcc
tccaaaaaccttcggcggaaccgtcggcgcagtgagcgctttgccaccaacctacggaat
gaaatccaaaggaaaaaggcccagcttcagcgtggccatggaccaggagggctgctgtgc
agcagagagaccgtccaagaagaggaggggtcagacctttgcgaagatggagcagactca
aacaggcctgttcagaacaattgcaccaaagttgcctttgccacatcggcggtccctgag
gattctcaggcttcatcacagatgaagacgtcaaacacctcaggagagtcagacttcggt
gtcctcaagaccacattgttaactcagggcaataatcgatcaaggtctgttcagattcta
gatccgggcgttcccagctttggtgttggcattagagtggttgaggaacctgctcctgct
ggtaaggctcgccgctggcgatggaccccagagcacaagctccagccagaacctgatcaa
gagcaacagtgtggagtcttgggcaatagggtgttaggagtaactgggtcacggcatgga
gtttgtgccttcagctcctcctcaagctcctcctatagccgctcctcttctagctctcga
tccgaagagtcggatatacttccgtttgcagatagaatgaagttttttgaagagacttcc
aaaggtatgcctgtgtcaaacgcctcaaagaggatcagtcacaggcagaaccatcaggat
aggcaattagatcaacagagaggggagatcagcaacaattcaacccaaatgagatactcc
taccagggaggagtacagcaggaaggtgtccattttccaaacacagtagaatccagaagg
cagtctgtgagtgccttcaggaagagaccgaaagagatagcgagggaacaactgagggag
agggaggtgaggtttagggagatagagaggcagcaggagctagaaaggcaagaaagagaa
ttagaaatggagcgggcaaagctgagagagattcagcgagaggaaaggatgaggcagtgg
gagagagaacgagagagggaactggaaaggacaaaagcggctgagaaggaaaggatggaa
aatcaacagttcccctcacatccggactgttacagtagccctagcatcagagaacaagga
aacttccagtataaggaccagttctacaactggtccggacaacagacattttctcattgt
caaaaccaagtcccgcattcagcttttcatctcgtcagaaatcatatgcagccagagaac
caagaggctttccatcagggatacaacacaaggagctacacccccacagagatgtttcac
tctccgcaacaggaaacgaccaagcttggcaggaagtacagcctgacagagagagactac
tctagctggagacgagagtccaggccgccgcagagcgtccatcagcagcagcatcccctt
catcaggcgcagtgggactccagacggcccgccagtcgcagcgatgaccgagacggctgc
accgccgcccccccgccggctcccctttacctccgaggacgagccatgtctgaaaacgac
ctgcgcttcgagagcagccaccgctggtcgccctctatttacggctccgtgagccagacc
ctgagcaagatggaggagggcggagacccgaccagcgccgccaggcagaggaagaagaaa
acgcctcctccgcccagaccaccaccgcccaaatgggagcagttccacagccgacgggcc
tcccaccacgccctgctggcgtcctcgccgttcgctgcccctccctccctcagcacggat
ggacgccactcggctcactccctctcctacgcccccccgcccgatacgtcgcggcagagg
tcctacagcctgcccccggagaggcaggaagcagagagctgttttcagtgcagctgcagc
cgaatccaaacctcaaccctatcccagccgtccaatcagagcacagctccgcccagcccc
atgctgtccaggaagggcttcaggccagtggccccgccccatgatgagagggaggatgag
gtaggggcggggcctgcagcttgtccaccagctgacagcccagtgagcagttcatctgga
atggatgtgagccacagtctggatcccgaatcacagcctggcgtcagacctgaggcctac
tgggagagagccgccgcgccttcccccagctcagaaaattgtcgtcctgctgacgctcac
tacagccaagcagatcagcagcagcaggtgtttataagcagaggcttccaggctgaccag
aggcagaacccccccgagtctggaaccgaagccacgctgagcccgagccagagccccgcc
cacagcctggacgcagagctggaggttcccatggaaacagacattgatgatttccaggag
ctgcccgtggaggagctgcccatcagcagcgagctgccatgcttcgctcaacctgtcaca
gtcctggagacggatatcgacacgctgcctgatccgggagactcgccgtcagccgaagct
ctggatgggagcggctcgctggaagaggaggaggaggagctggagcttttcccgcccagc
ggggagggagagtcggagacggaaagctggaggggaggctgcccgtctgcggagcacaac
accgacagcctggacaggcagtctggggcgagctccagctgttcgtcttattaccacaca
tcagcagccaaggctcagattctgtcccagatgaaggacttcaccgaccgcggagagaag
ctccaggaggacgagctcacctacaagaagcagctgatggagagcctccgtaagaagctg
ggagtgctgagggaggctcagaggggcctgcaggaggacatcagggccaacgcacagctg
ggagacgaggtggagaacatggtggtggcggtgtgcaagcccaatgaggtggacaagtac
cgcatgttcatcggcgacctggacaaggtggtcagcctgatgctgtctctgtctgggagg
ctgctcagagtggagaccacgctggacacgctggatcccgagacggagcaccaggaccgg
ctccccctgctggaaaagaagcgtcagctcatgaggcagctgtccgaggctcaggacttg
aaggaccacgtggatcgcagagagcaggccgtcagccgggttctggcccgctgcctcagc
ccggagcagcacagagactacagccactttgtgaagatgaaggctgccttgctggtggag
cagaggcaactcgaggacaagattcgtctgggagaggagcagctgagaggactgagagag
agcctgggcctgggaatgggaatgggtttaggaatatcaatgggatacggacattactga
DBGET
integrated database retrieval system
