KEGG   Cyprinodon tularosa (White Sands pupfish): 119793440
Entry
119793440         CDS       T07496                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ctul04121]
    119793440 (hltf)
   03400 DNA repair and recombination proteins [BR:ctul03400]
    119793440 (hltf)
Enzymes [BR:ctul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119793440 (hltf)
Ubiquitin system [BR:ctul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119793440 (hltf)
DNA repair and recombination proteins [BR:ctul03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    119793440 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-RING_2 DEAD ResIII zf-C3HC4_4 zf-Nse Prok-RING_4 zf-RING_6 zf-rbx1 zf-ANAPC11 zf-RING_4 HDA2-3 MS_channel_2nd
Other DBs
NCBI-GeneID: 119793440
NCBI-ProteinID: XP_038156592
LinkDB
Position
Unknown
AA seq 747 aa
YISLQAVVTPLLPHQKQALSWMCARENKDTLPPFWEKRGELYYNSLTCFSAKELPERVRG
GILADDMGLGKTLTTIALILTNFHKGKPLPVEKCDGPSKPIKTKRKLLEGSKLEESRDTA
SAAGGISLCSEIPEKDVVCVDQADVVLIEDEPQKSTGKGKHKPSKRKTSKDGSALFEDLD
FAAALSGSASDTVPKKKKTAKKSKLKQSVEVPISEYTDDFSARATLIICPLSVLSNWLDQ
LEQHLQHNVKPNIYLYYGSERNRSESFLSSQDVVITTYNVLSSEFGNKSPLHGVDWLRVV
LDEGHIIRNPNAQMSKAVLELKAQRRWILSGTPVQNSVKDLWMLLAFLRLKPFDVREWWN
RVIQRPVTLGDRVGLQNLQNLVKCITLRRTKNSKVNGQHLVSLPKKTVYVEQVELSQQER
EEYELARKEGRRTIGRYVDEGSVLKNYADVLAILTRLRQYCCHPDLLGKISAEFAAADNP
ADLRQRLIERLRLVLASGSDEECSVCLDSLRLPVITHCAHVYCRPCIAQVISGEQKARCP
LCRSDIKASELVEFPPEKTEDETSMNSDSWRTSSKVQALMGNLFRLRSEDSNTKCLVVSQ
FTRFLTILQTPLREHGFSFVRLDGTMSQKKRTQIIQEFQSSAADSPKVMLLSLKAGGVGL
NLTAASHVFLMDPAWNPATEEQCIDRCHRIGQKRNVVVTKFIVKDSVEENMVKIQKKKQD
LVEKTFGLANMDRKTSRIDDIRALLEM
NT seq 2244 nt   +upstreamnt  +downstreamnt
tatatatctctgcaggctgtggtcactcccctgctgccccaccaaaagcaggccctgtcc
tggatgtgcgctcgggagaataaagacacactgccacctttctgggagaagcgaggcgag
ctttactacaacagcctcacgtgtttctctgctaaagaattaccagagagggttcggggg
ggaatactggctgatgacatgggactgggtaaaactctgacaaccatcgctctgatcctc
actaacttccacaaaggaaaacctttgcctgttgagaaatgtgacggaccatctaagcct
attaaaactaaacgtaagctactggaaggctctaaactggaagagagcagagatacagct
agtgcagcagggggaatttcactctgctcagaaattccagagaaagatgtggtttgtgtt
gatcaagcagatgtggtgctgatagaagatgagccacagaaaagtacaggcaaagggaag
cataaaccctctaaacggaaaaccagtaaagatggttcagcgttgtttgaagacctggac
tttgcggcggccctgagtggctcagcatcagacacagtcccaaagaagaagaaaacagct
aagaagagcaaacttaaacagagtgtggaagttcccatctctgaatatacagatgatttc
tcagcgagggcaactcttatcatctgtcctctctctgtgctcagcaactggttggaccag
ttagagcaacacttgcagcacaacgtgaagcccaacatctatctgtactacggttccgag
cgcaacaggagcgagtcatttctgtcctctcaggatgtggtgatcaccacctacaatgtc
ctctctagcgagtttggaaataagagtcctttgcatggggtcgactggctgagggtggtt
ctggatgaaggacacatcatcagaaacccaaacgcacagatgagcaaggctgtgctggaa
ctgaaagctcagagacgctggatactttcaggtactccggtccagaacagtgtgaaggac
ctgtggatgctgctcgccttcctgcggctgaagcccttcgatgtgagggagtggtggaac
agagtaatccagagaccggtcacactgggagatagggtcggcctgcaaaaccttcagaat
ctggtgaagtgcatcacgctgagacggaccaaaaacagcaaggtgaacgggcagcacctg
gtgtcgctacctaagaagactgtttacgtggagcaggtggagctcagccagcaggagagg
gaggagtatgagctggctcgcaaagagggacgccgcacaatcggcagatatgtagacgaa
gggtctgtgttgaagaattatgctgacgtcctcgccatcttgacgaggctcagacaatac
tgctgccatcctgatctgcttgggaaaatatccgcagaattcgccgccgcggacaatcca
gcagatctgcggcagcggctgatagaaagactgcggctggtgttagccagtggctctgac
gaggagtgctctgtgtgtctggactccctccgtctacccgtcatcactcactgcgcccac
gtttactgccggccctgcatcgctcaggtcatcagcggtgagcagaaggcccggtgtcct
ctctgtcgaagtgatattaaggccagtgagctggtggagtttccgccagagaaaacagaa
gatgagacgagtatgaactctgacagctggaggacaagttcaaaggttcaggcgctgatg
ggaaacctgttcaggctgcggtccgaagacagcaacaccaaatgcctggttgtgtctcag
tttacacgtttcctcaccatccttcagaccccactcagagaacacggcttcagttttgta
cgtctggacggcacaatgagccagaagaagagaactcagatcatccaggagtttcagagc
tctgcggcagacagtcctaaagtcatgttgctgtcgctcaaagccggaggggtcgggctt
aacctgactgcagcctctcatgttttcctcatggatcctgcctggaaccctgctactgaa
gagcagtgtatcgatcgttgccaccgtataggccagaagagaaacgtcgtcgtaaccaag
ttcattgtgaaggactcggtggaggagaacatggtgaagatccaaaagaagaagcaagac
ctggtggagaagacgttcggcttggccaacatggacaggaaaacctctcggatcgacgac
atcagagctctgttggagatgtag

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