Acetivibrio thermocellus DSM 1313: Clo1313_2609
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Entry
Clo1313_2609 CDS
T01933
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Pathway
ctx00470
D-Amino acid metabolism
ctx00550
Peptidoglycan biosynthesis
ctx01100
Metabolic pathways
ctx01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Clo1313_2609
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Clo1313_2609
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Clo1313_2609
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ctx01011
]
Clo1313_2609
Enzymes [BR:
ctx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Clo1313_2609
Peptidoglycan biosynthesis and degradation proteins [BR:
ctx01011
]
Precursor biosynthesis
Amino acid ligase
Clo1313_2609
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_3
ATP-grasp_4
RimK
GARS_A
MCR_beta_N
Motif
Other DBs
NCBI-ProteinID:
ADU75609
LinkDB
All DBs
Position
complement(3074441..3075571)
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AA seq
376 aa
AA seq
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MGDKKRVLVIFGGQSSEHEVSRISATSILKNINLDKFDVSMIGITKDGKWLYYDGPIDKI
PSGEWEEIALKDGTRSIADRVSLFDNIISCKNNACGLEKASENEKSKKIDVVFPVLHGCN
GEDGTIQGLFELAGIPYVGCGVLASAVGMDKIYAKIIFEKAGIPQADYLYFTRKEIYGDV
EGVVDKIEEKFSYPVFVKPSNAGSSVGVSKAHDKNELKEALIYAARYDRKVLIEEFINGR
EVECAVLGNDDPVASTVGEIIPGNEFYDYKAKYIDNTSKIKIPADLPEETVEQIRNYAVK
AFKALDCSGLARVDFFVHKETGKVYINEINTMPGFTSISMYPMLWEESGISYPELIEKLI
DLAVQRYNDNLKEYDE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataaaaaaagagtactggttatttttggcggacaatcgtcggaacacgaagtt
tcaagaatatcggcaacatccatactgaagaacattaatttggataaattcgatgtttca
atgataggaatcacaaaagacggaaagtggctttattatgacgggcctattgataaaatt
ccttccggagagtgggaggaaatcgcactgaaagatgggacaagaagtattgccgacaga
gtgagcctgttcgacaacataataagttgcaaaaataacgcatgcggccttgaaaaggcc
tcagagaacgaaaaaagcaaaaagatagatgtggtttttccggttctgcacggctgcaac
ggtgaagacgggaccatccagggactttttgaactggcgggcattccttatgtgggctgc
ggtgtgctggcttcagcagtcggaatggataagatttatgcaaagataatttttgaaaaa
gccggaataccccaggcggattatctgtatttcacaagaaaagaaatttacggggatgtt
gagggtgtggttgacaaaatagaggagaaattttcatatcctgtatttgtaaaaccgtcc
aatgccggttcttccgtaggtgtgtcaaaggcgcatgataaaaatgagcttaaagaggca
ttgatttatgccgccaggtatgatagaaaagtactgattgaggaatttatcaacggaaga
gaagttgagtgtgccgtgctggggaatgatgatcctgtggcatcaacggtgggagaaatc
attccgggaaatgaattttacgactacaaggcaaaatacattgacaatacttccaaaata
aaaattcccgcggatcttccagaagagaccgtggaacaaataagaaattatgcagtaaag
gcattcaaggctttggattgttcgggacttgcaagagttgacttttttgtgcacaaggaa
accggaaaagtttatataaatgaaattaatacaatgccgggatttacaagtataagcatg
tatcccatgctttgggaggaatccggcatttcctatccggaacttattgaaaagctgatt
gacttggctgttcaaagatacaatgacaatctcaaagaatatgatgagtag
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